RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 REG3AQ06141 175 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 TMEM14EPQ6UXP3 125 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 PHYHIPLQ96FC7 376 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 RETNLBQ9BQ08 111 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 BCL7BQ9BQE9 202 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 C11orf21Q9P2W6 132 aa4.29□□□□□ -1.72
VCAN-207ENST00000507162 TRBV7-3A0A075B6L6 115 aa4.28□□□□□ -1.72
VCAN-207ENST00000507162 IGLV7-43P04211 117 aa4.28□□□□□ -1.72
VCAN-207ENST00000507162 RNASE3P12724 160 aaKnown RBP4.28□□□□□ -1.72
VCAN-207ENST00000507162 S100A4P26447 101 aaKnown RBP4.28□□□□□ -1.72
VCAN-207ENST00000507162 PCP4P48539 62 aa4.28□□□□□ -1.72
VCAN-207ENST00000507162 EIF5AP63241 154 aaKnown RBP4.28□□□□□ -1.72
VCAN-207ENST00000507162 UFSP1Q6NVU6 142 aa4.28□□□□□ -1.72
VCAN-207ENST00000507162 TVP23CQ96ET8 276 aa4.28□□□□□ -1.72
VCAN-207ENST00000507162 MLST8Q9BVC4 326 aa4.28□□□□□ -1.72
VCAN-207ENST00000507162 SLC25A2Q9BXI2 301 aa4.28□□□□□ -1.72
VCAN-207ENST00000507162 MCUBQ9NWR8 336 aa4.28□□□□□ -1.72
VCAN-207ENST00000507162 EXTL2Q9UBQ6 330 aa4.28□□□□□ -1.72
VCAN-207ENST00000507162 SCP2D1Q9UJQ7 156 aa4.28□□□□□ -1.72
VCAN-207ENST00000507162 TRAV8-4A0A0B4J246 113 aa4.27□□□□□ -1.73
VCAN-207ENST00000507162 P01737 135 aa4.27□□□□□ -1.73
VCAN-207ENST00000507162 KRTAP1-4P0C5Y4 121 aa4.27□□□□□ -1.73
VCAN-207ENST00000507162 GZMBP10144 247 aa4.27□□□□□ -1.73
VCAN-207ENST00000507162 GABARAPL2P60520 117 aa4.27□□□□□ -1.73
VCAN-207ENST00000507162 RAB2AP61019 212 aa4.27□□□□□ -1.73
VCAN-207ENST00000507162 NEDD8Q15843 81 aa4.27□□□□□ -1.73
VCAN-207ENST00000507162 GCSAMLQ5JQS6 135 aa4.27□□□□□ -1.73
VCAN-207ENST00000507162 MIR17HGQ75NE6 70 aa4.27□□□□□ -1.73
VCAN-207ENST00000507162 C15orf56Q8N910 161 aa4.27□□□□□ -1.73
VCAN-207ENST00000507162 DIRAS2Q96HU8 199 aa4.27□□□□□ -1.73
VCAN-207ENST00000507162 GGACTQ9BVM4 153 aa4.27□□□□□ -1.73
VCAN-207ENST00000507162 IGLV7-46A0A075B6I9 117 aa4.26□□□□□ -1.73
VCAN-207ENST00000507162 A0A1W2PNN7 141 aa4.26□□□□□ -1.73
VCAN-207ENST00000507162 GAGE12HA6NDE8 117 aa4.26□□□□□ -1.73
VCAN-207ENST00000507162 RHODO00212 210 aa4.26□□□□□ -1.73
VCAN-207ENST00000507162 RPL29P47914 159 aaKnown RBP4.26□□□□□ -1.73
VCAN-207ENST00000507162 AMTP48728 403 aa4.26□□□□□ -1.73
VCAN-207ENST00000507162 ZNF80P51504 273 aaPredicted RBP4.26□□□□□ -1.73
VCAN-207ENST00000507162 GAGE2BQ13066 116 aa4.26□□□□□ -1.73
VCAN-207ENST00000507162 PRR27Q6MZM9 219 aa4.26□□□□□ -1.73
VCAN-207ENST00000507162 GOLT1AQ6ZVE7 132 aa4.26□□□□□ -1.73
VCAN-207ENST00000507162 PHF5AQ7RTV0 110 aaKnown RBP4.26□□□□□ -1.73
VCAN-207ENST00000507162 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.26□□□□□ -1.73
VCAN-207ENST00000507162 C15orf40Q8WUR7 153 aa4.26□□□□□ -1.73
VCAN-207ENST00000507162 TMED6Q8WW62 240 aa4.26□□□□□ -1.73
VCAN-207ENST00000507162 FXYD5Q96DB9 178 aa4.26□□□□□ -1.73
VCAN-207ENST00000507162 SGK494Q96LW2 274 aa4.26□□□□□ -1.73
VCAN-207ENST00000507162 KRTAP4-1Q9BYQ7 146 aa4.26□□□□□ -1.73
VCAN-207ENST00000507162 SLIRPQ9GZT3 109 aaKnown RBP4.26□□□□□ -1.73
VCAN-207ENST00000507162 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
VCAN-207ENST00000507162 A0A087WZ39 114 aa4.25□□□□□ -1.73
VCAN-207ENST00000507162 TRBV10-1A0A0K0K1A3 114 aa4.25□□□□□ -1.73
VCAN-207ENST00000507162 F5H697 171 aa4.25□□□□□ -1.73
VCAN-207ENST00000507162 TRIAP1O43715 76 aa4.25□□□□□ -1.73
VCAN-207ENST00000507162 EIF3GO75821 320 aaKnown RBP eCLIP4.25□□□□□ -1.73
VCAN-207ENST00000507162 CFC1BP0CG36 223 aa4.25□□□□□ -1.73
VCAN-207ENST00000507162 SSBP1Q04837 148 aaKnown RBP4.25□□□□□ -1.73
VCAN-207ENST00000507162 BAXQ07812 192 aa4.25□□□□□ -1.73
VCAN-207ENST00000507162 TMEM128Q5BJH2 165 aa4.25□□□□□ -1.73
VCAN-207ENST00000507162 NTM-AS1Q6ZSK4 140 aa4.25□□□□□ -1.73
VCAN-207ENST00000507162 CMTM2Q8TAZ6 248 aa4.25□□□□□ -1.73
VCAN-207ENST00000507162 FAM167A-AS1Q96KT0 104 aa4.25□□□□□ -1.73
VCAN-207ENST00000507162 CTDSP1Q9GZU7 261 aa4.25□□□□□ -1.73
VCAN-207ENST00000507162 PHLDA3Q9Y5J5 127 aa4.25□□□□□ -1.73
VCAN-207ENST00000507162 IGKV3OR2-268A0A0C4DH90 116 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 OR7C2O60412 319 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 CST7O76096 145 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 SFT2D2O95562 160 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 GCGP01275 180 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 SULT1A2P50226 295 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 BCAP31P51572 246 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 CTF1Q16619 201 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 TPRXLQ17RH7 258 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 LINC00526Q96FQ7 95 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 DERL1Q9BUN8 251 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 UQCC1Q9NVA1 299 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 GSKIPQ9P0R6 139 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 WDR83OSQ9Y284 106 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 PKIGQ9Y2B9 76 aa4.24□□□□□ -1.73
VCAN-207ENST00000507162 UBE2L5PA0A1B0GUS4 154 aa4.23□□□□□ -1.73
VCAN-207ENST00000507162 FGF7P21781 194 aa4.23□□□□□ -1.73
VCAN-207ENST00000507162 TAS2R30P59541 319 aa4.23□□□□□ -1.73
VCAN-207ENST00000507162 NHLH2Q02577 135 aa4.23□□□□□ -1.73
VCAN-207ENST00000507162 PPP1R1AQ13522 171 aa4.23□□□□□ -1.73
VCAN-207ENST00000507162 C9orf116Q5BN46 136 aaPredicted RBP4.23□□□□□ -1.73
VCAN-207ENST00000507162 SPANXN2Q5MJ10 180 aa4.23□□□□□ -1.73
VCAN-207ENST00000507162 PIK3CD-AS1Q5SR53 167 aa4.23□□□□□ -1.73
VCAN-207ENST00000507162 C20orf203Q8NBC4 194 aa4.23□□□□□ -1.73
VCAN-207ENST00000507162 NEXN-AS1Q8NBZ9 246 aa4.23□□□□□ -1.73
VCAN-207ENST00000507162 NDFIP1Q9BT67 221 aa4.23□□□□□ -1.73
VCAN-207ENST00000507162 MIXL1Q9H2W2 232 aa4.23□□□□□ -1.73
VCAN-207ENST00000507162 CARHSP1Q9Y2V2 147 aaKnown RBP4.23□□□□□ -1.73
VCAN-207ENST00000507162 IGLV4-60A0A075B6I1 120 aa4.22□□□□□ -1.73
VCAN-207ENST00000507162 TRBV25-1A0A075B6N4 114 aa4.22□□□□□ -1.73
VCAN-207ENST00000507162 C7orf66A4D0T2 115 aa4.22□□□□□ -1.73
VCAN-207ENST00000507162 L7N2F9 121 aa4.22□□□□□ -1.73
VCAN-207ENST00000507162 MBPP02686 304 aaPredicted RBP4.22□□□□□ -1.73
VCAN-207ENST00000507162 SPCS2Q15005 226 aa4.22□□□□□ -1.73
VCAN-207ENST00000507162 OR11H4Q8NGC9 324 aa4.22□□□□□ -1.73
VCAN-207ENST00000507162 OR10G8Q8NGN5 311 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms