RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 U3KQA8 63 aa-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 TNXBP22105 4242 aa-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 KMT2AQ03164 3969 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 PRRC2CQ9Y520 2896 aaKnown RBP-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 NBPF19A0A087WUL8 3843 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 FER1L6Q2WGJ9 1857 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 TENM2Q9NT68 2774 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 WNK2Q9Y3S1 2297 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 MED13LQ71F56 2210 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 DNHD1Q96M86 4753 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 CELSR1Q9NYQ6 3014 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 TNS1Q9HBL0 1735 aaKnown RBP-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 GVQW2A0A096LPI5 108 aaPredicted RBP-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 TRBV7-1A0A0A6YYK4 115 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 H0YJX3 145 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 M0R2P5 195 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 NMBP08949 121 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 SLC25A6P12236 298 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 CCL3L1P16619 93 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 MT4P47944 62 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 CLLU1Q5K131 121 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 TMEM244Q5VVB8 128 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 C4orf33Q8N1A6 199 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 MMGT1Q8N4V1 131 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 AIF1LQ9BQI0 150 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 HIGD1AQ9Y241 93 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 V9GYV3 84 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 CHD9Q3L8U1 2897 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 LAMA5O15230 3695 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 NIPBLQ6KC79 2804 aaeCLIP-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 TANC1Q9C0D5 1861 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 UNC79Q9P2D8 2635 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 ARAP1Q96P48 1450 aa-0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 TTC28Q96AY4 2481 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 MAP1AP78559 2803 aaPredicted RBP-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 ZNF142P52746 1687 aaPredicted RBP-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 TACC2O95359 2948 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 CELSR2Q9HCU4 2923 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 POLQO75417 2590 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 ABCA12Q86UK0 2595 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 C10orf142B7Z368 130 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 TFF1P04155 84 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 NBEAP1P0C6P0 100 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 IFITM1P13164 125 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 ACYP2P14621 99 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 NCS1P62166 190 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPCS2Q15005 226 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 KRTAP19-7Q3SYF9 63 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 MORN2Q502X0 79 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 C20orf197Q8N268 126 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 COX7B2Q8TF08 81 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 IFI27L1Q96BM0 104 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 SAR1AQ9NR31 198 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 ASXL3Q9C0F0 2248 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 ZANQ9Y493 2812 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 UBR5O95071 2799 aaPredicted RBP-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 COL12A1Q99715 3063 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 PTPRMP28827 1452 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPTBN4Q9H254 2564 aa-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 LAMA2P24043 3122 aaKnown RBP-0.04□□□□□ -2.42
HMGB1P29-201ENST00000505659 NF1P21359 2839 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 KIAA0100Q14667 2235 aaKnown RBP-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 CELSR3Q9NYQ7 3312 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 ZFHX4Q86UP3 3567 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 HIVEP3Q5T1R4 2406 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 DMBT1Q9UGM3 2413 aaPredicted RBP-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 LRP1BQ9NZR2 4599 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 SRCAPQ6ZRS2 3230 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 FAM186AA6NE01 2351 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 CUBNO60494 3623 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 SETD2Q9BYW2 2564 aaPredicted RBP-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 LAMA3Q16787 3333 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 TRBV20-1A0A075B6N2 111 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 TRAV12-3A0A0B4J271 114 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 GCHFRP30047 84 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 KRTAP19-8Q3LI54 63 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 KRTAP19-6Q3LI70 58 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 TAC4Q86UU9 113 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 CTAGE3PQ8IX95 158 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 VSTM2AQ8TAG5 236 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 PKD1P98161 4303 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 JMJD1CQ15652 2540 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 SRRM2Q9UQ35 2752 aaKnown RBP-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 CSMD3Q7Z407 3707 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 ZZEF1O43149 2961 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 HSPG2P98160 4391 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 FAM208BQ5VWN6 2430 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 FAT3Q8TDW7 4589 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 LYSTQ99698 3801 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 OVOS2A0A0J9YW53 1432 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 OVOS2Q6IE36 1432 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 PI4KAP42356 2102 aa-0.05□□□□□ -2.42
HMGB1P29-201ENST00000505659 CACNA1AO00555 2505 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 TNRC18O15417 2968 aaPredicted RBP-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 TRRAPQ9Y4A5 3859 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 ABCA1O95477 2261 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 HIVEP1P15822 2718 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 FLGP20930 4061 aaPredicted RBP-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 VPS13BQ7Z7G8 4022 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms