RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 UNC13CQ8NB66 2214 aa1.67□□□□□ -2.14
COPS4-203ENST00000504274 PLXNA1Q9UIW2 1896 aa1.67□□□□□ -2.14
COPS4-203ENST00000504274 MDC1Q14676 2089 aaKnown RBP1.67□□□□□ -2.14
COPS4-203ENST00000504274 MYO18AQ92614 2054 aaKnown RBP1.67□□□□□ -2.14
COPS4-203ENST00000504274 NWD2Q9ULI1 1742 aa1.67□□□□□ -2.14
COPS4-203ENST00000504274 UBE2G1P62253 170 aa1.67□□□□□ -2.14
COPS4-203ENST00000504274 RBM3P98179 157 aaKnown RBP1.67□□□□□ -2.14
COPS4-203ENST00000504274 C10orf82Q8WW14 230 aa1.67□□□□□ -2.14
COPS4-203ENST00000504274 PRO1933Q9H354 126 aa1.67□□□□□ -2.14
COPS4-203ENST00000504274 SHANK2Q9UPX8 1470 aa1.67□□□□□ -2.14
COPS4-203ENST00000504274 COL4A6Q14031 1691 aa1.67□□□□□ -2.14
COPS4-203ENST00000504274 GBF1Q92538 1859 aa1.67□□□□□ -2.14
COPS4-203ENST00000504274 ARFGEF1Q9Y6D6 1849 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 TRBV6-8A0A0A6YYG3 113 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 TRAV17A0A0B4J275 112 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 TCRBV3S1A0A5B6 114 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 CCL16O15467 120 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 IGHV3-33P01772 117 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 IGLC1P0CG04 106 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 UBA52P62987 128 aaKnown RBP1.66□□□□□ -2.14
COPS4-203ENST00000504274 ELOBQ15370 118 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 SPANXN1Q5VSR9 72 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 SLC48A1Q6P1K1 146 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 C5orf38Q86SI9 138 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 C15orf53Q8NAA6 179 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 TMEM141Q96I45 108 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 AQP10Q96PS8 301 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 CYSTM1Q9H1C7 97 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 PSME4Q14997 1843 aa1.66□□□□□ -2.14
COPS4-203ENST00000504274 MARF1Q9Y4F3 1742 aaKnown RBP1.66□□□□□ -2.14
COPS4-203ENST00000504274 DLEC1Q9Y238 1755 aa1.65□□□□□ -2.14
COPS4-203ENST00000504274 BAZ1AQ9NRL2 1556 aaPredicted RBP1.65□□□□□ -2.15
COPS4-203ENST00000504274 GAPVD1Q14C86 1478 aa1.65□□□□□ -2.15
COPS4-203ENST00000504274 FYCO1Q9BQS8 1478 aa1.65□□□□□ -2.15
COPS4-203ENST00000504274 IGKV3-7A0A075B6H7 116 aa1.65□□□□□ -2.15
COPS4-203ENST00000504274 IL7P13232 177 aa1.65□□□□□ -2.15
COPS4-203ENST00000504274 COX7CP15954 63 aa1.65□□□□□ -2.15
COPS4-203ENST00000504274 Q0VG73 95 aa1.65□□□□□ -2.15
COPS4-203ENST00000504274 RHOHQ15669 191 aa1.65□□□□□ -2.15
COPS4-203ENST00000504274 C10orf55Q5SWW7 151 aa1.65□□□□□ -2.15
COPS4-203ENST00000504274 ZNF431Q8TF32 576 aaPredicted RBP1.65□□□□□ -2.15
COPS4-203ENST00000504274 SPANXDQ9BXN6 97 aa1.65□□□□□ -2.15
COPS4-203ENST00000504274 DOCK2Q92608 1830 aa1.65□□□□□ -2.15
COPS4-203ENST00000504274 LRRIQ1Q96JM4 1722 aa1.65□□□□□ -2.15
COPS4-203ENST00000504274 FREM1Q5H8C1 2179 aa1.65□□□□□ -2.15
COPS4-203ENST00000504274 RGPD4Q7Z3J3 1758 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 ZGRF1Q86YA3 2104 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 CHD3Q12873 2000 aaKnown RBP1.64□□□□□ -2.15
COPS4-203ENST00000504274 IFT140Q96RY7 1462 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 UBR1Q8IWV7 1749 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 NRXN2Q9P2S2 1712 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 TRAV2A0A0B4J234 112 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 H3BRN7 92 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 NUPR1O60356 82 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 SNCGO76070 127 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 IGLV3-1P01715 115 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 C9orf116Q5BN46 136 aaPredicted RBP1.64□□□□□ -2.15
COPS4-203ENST00000504274 C12orf73Q69YU5 71 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 LYPD5Q6UWN5 251 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 C2orf82Q6UX34 121 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 TTTY12Q9BZ98 90 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 EXPH5Q8NEV8 1989 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 SCAPERQ9BY12 1400 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 TCHHQ07283 1943 aa1.64□□□□□ -2.15
COPS4-203ENST00000504274 ANKRD36BQ8N2N9 1353 aa1.63□□□□□ -2.15
COPS4-203ENST00000504274 PPLO60437 1756 aa1.63□□□□□ -2.15
COPS4-203ENST00000504274 PRDM15P57071 1507 aaPredicted RBP1.63□□□□□ -2.15
COPS4-203ENST00000504274 DCAF1Q9Y4B6 1507 aa1.63□□□□□ -2.15
COPS4-203ENST00000504274 CLPSL1A2RUU4 121 aa1.63□□□□□ -2.15
COPS4-203ENST00000504274 CCKP06307 115 aa1.63□□□□□ -2.15
COPS4-203ENST00000504274 OR10AG1Q8NH19 301 aa1.63□□□□□ -2.15
COPS4-203ENST00000504274 DPY30Q9C005 99 aa1.63□□□□□ -2.15
COPS4-203ENST00000504274 NPVFQ9HCQ7 196 aa1.63□□□□□ -2.15
COPS4-203ENST00000504274 SCP2D1Q9UJQ7 156 aa1.63□□□□□ -2.15
COPS4-203ENST00000504274 C22orf24Q9Y442 160 aa1.63□□□□□ -2.15
COPS4-203ENST00000504274 V9GYS6 101 aa1.63□□□□□ -2.15
COPS4-203ENST00000504274 DAPK1P53355 1430 aa1.63□□□□□ -2.15
COPS4-203ENST00000504274 PLEKHH2Q8IVE3 1493 aa1.63□□□□□ -2.15
COPS4-203ENST00000504274 RGPD3A6NKT7 1758 aaPredicted RBP1.62□□□□□ -2.15
COPS4-203ENST00000504274 CDK13Q14004 1512 aaKnown RBP1.62□□□□□ -2.15
COPS4-203ENST00000504274 UBE2L5PA0A1B0GUS4 154 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 TRBV6-4A0A1B0GX49 114 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 hADV29S1A0JD25 119 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 NUPR2A6NF83 97 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 FAM24AA6NFZ4 105 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 PIPP12273 146 aaPredicted RBP1.62□□□□□ -2.15
COPS4-203ENST00000504274 CBLN1P23435 193 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 SNCAP37840 140 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 UBE2L3P68036 154 aaKnown RBP1.62□□□□□ -2.15
COPS4-203ENST00000504274 ESPL1Q14674 2120 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 COMMD6Q7Z4G1 85 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 IFI27L1Q96BM0 104 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 TXNDC17Q9BRA2 123 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 VAMP8Q9BV40 100 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 GOLGA3Q08378 1498 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 CCDC18Q5T9S5 1454 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 LOC285556D6RIA3 1793 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 FBN3Q75N90 2809 aa1.62□□□□□ -2.15
COPS4-203ENST00000504274 ICE1Q9Y2F5 2266 aa1.61□□□□□ -2.15
COPS4-203ENST00000504274 RREB1Q92766 1687 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms