RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 IGHV3-33P01772 117 aa12.64□□□□□ -0.39
ECM1-207ENST00000498579 CXCL1P09341 107 aa12.64□□□□□ -0.39
ECM1-207ENST00000498579 IGHV3-30-3P0DP02 117 aa12.64□□□□□ -0.39
ECM1-207ENST00000498579 IGHV3-30-5P0DP03 117 aa12.64□□□□□ -0.39
ECM1-207ENST00000498579 TOR2AQ5JU69 321 aa12.64□□□□□ -0.39
ECM1-207ENST00000498579 FAM74A4Q5TZK3 123 aa12.64□□□□□ -0.39
ECM1-207ENST00000498579 EIF5AL1Q6IS14 154 aaKnown RBP12.64□□□□□ -0.39
ECM1-207ENST00000498579 BAGE2Q86Y30 109 aa12.64□□□□□ -0.39
ECM1-207ENST00000498579 SAMD10Q9BYL1 202 aa12.64□□□□□ -0.39
ECM1-207ENST00000498579 JPT2Q9H910 190 aa12.64□□□□□ -0.39
ECM1-207ENST00000498579 A0A1B0GV50 99 aa12.63□□□□□ -0.39
ECM1-207ENST00000498579 SCO2A0A1W2PP80 73 aa12.63□□□□□ -0.39
ECM1-207ENST00000498579 RAB5CP51148 216 aa12.63□□□□□ -0.39
ECM1-207ENST00000498579 TMUB2Q71RG4 321 aa12.63□□□□□ -0.39
ECM1-207ENST00000498579 NTN5Q8WTR8 489 aaPredicted RBP12.63□□□□□ -0.39
ECM1-207ENST00000498579 TM2D2Q9BX73 214 aa12.63□□□□□ -0.39
ECM1-207ENST00000498579 KRTAP4-5Q9BYR2 181 aa12.63□□□□□ -0.39
ECM1-207ENST00000498579 MANBALQ9NQG1 85 aa12.63□□□□□ -0.39
ECM1-207ENST00000498579 TRBV10-1A0A0K0K1A3 114 aa12.62□□□□□ -0.39
ECM1-207ENST00000498579 TEX46H3BTG2 121 aa12.62□□□□□ -0.39
ECM1-207ENST00000498579 C14orf178Q8N769 122 aaPredicted RBP12.62□□□□□ -0.39
ECM1-207ENST00000498579 Q9HAA7 133 aa12.62□□□□□ -0.39
ECM1-207ENST00000498579 ABCA13Q86UQ4 5058 aa12.62□□□□□ -0.39
ECM1-207ENST00000498579 TRAV8-3A0A0A6YYJ7 113 aa12.61□□□□□ -0.39
ECM1-207ENST00000498579 MLST8Q9BVC4 326 aa12.61□□□□□ -0.39
ECM1-207ENST00000498579 A0A087WWL8 130 aa12.6□□□□□ -0.39
ECM1-207ENST00000498579 RPL36AP83881 106 aaKnown RBP12.6□□□□□ -0.39
ECM1-207ENST00000498579 RPL36ALQ969Q0 106 aaKnown RBP12.6□□□□□ -0.39
ECM1-207ENST00000498579 URGCP-MRPS24S4R325 110 aa12.6□□□□□ -0.39
ECM1-207ENST00000498579 LRCOL1A6NCL2 159 aa12.59□□□□□ -0.39
ECM1-207ENST00000498579 GCSHP23434 173 aa12.59□□□□□ -0.39
ECM1-207ENST00000498579 COX11Q9Y6N1 276 aa12.59□□□□□ -0.39
ECM1-207ENST00000498579 IGLV5-52A0A0A0MRZ9 124 aa12.58□□□□□ -0.4
ECM1-207ENST00000498579 TRAV1-1A0A0B4J248 108 aa12.58□□□□□ -0.4
ECM1-207ENST00000498579 FUSP35637 526 aaKnown RBP eCLIP12.58□□□□□ -0.4
ECM1-207ENST00000498579 KCNIP4Q6PIL6 250 aa12.58□□□□□ -0.4
ECM1-207ENST00000498579 GNG13Q9P2W3 67 aa12.58□□□□□ -0.4
ECM1-207ENST00000498579 RPL35P42766 123 aaKnown RBP12.57□□□□□ -0.4
ECM1-207ENST00000498579 RAB4BP61018 213 aa12.57□□□□□ -0.4
ECM1-207ENST00000498579 Q8N814 137 aa12.57□□□□□ -0.4
ECM1-207ENST00000498579 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.57□□□□□ -0.4
ECM1-207ENST00000498579 C11orf52Q96A22 123 aa12.57□□□□□ -0.4
ECM1-207ENST00000498579 RMI2Q96E14 147 aa12.57□□□□□ -0.4
ECM1-207ENST00000498579 CHCHD7Q9BUK0 85 aa12.57□□□□□ -0.4
ECM1-207ENST00000498579 TRBV7-3A0A075B6L6 115 aa12.56□□□□□ -0.4
ECM1-207ENST00000498579 SNAI2O43623 268 aa12.56□□□□□ -0.4
ECM1-207ENST00000498579 OR5AL1P0C617 328 aa12.56□□□□□ -0.4
ECM1-207ENST00000498579 SPANXN1Q5VSR9 72 aa12.56□□□□□ -0.4
ECM1-207ENST00000498579 PRR27Q6MZM9 219 aa12.56□□□□□ -0.4
ECM1-207ENST00000498579 Q9UF83 564 aa12.56□□□□□ -0.4
ECM1-207ENST00000498579 KRTAP10-1P60331 282 aa12.55□□□□□ -0.4
ECM1-207ENST00000498579 RPL19P84098 196 aaKnown RBP12.55□□□□□ -0.4
ECM1-207ENST00000498579 ELOBQ15370 118 aa12.55□□□□□ -0.4
ECM1-207ENST00000498579 TCTE3Q8IZS6 198 aa12.55□□□□□ -0.4
ECM1-207ENST00000498579 OR10G8Q8NGN5 311 aa12.55□□□□□ -0.4
ECM1-207ENST00000498579 OR10AG1Q8NH19 301 aa12.55□□□□□ -0.4
ECM1-207ENST00000498579 SMIM12Q96EX1 92 aa12.55□□□□□ -0.4
ECM1-207ENST00000498579 SSBP4Q9BWG4 385 aaPredicted RBP12.55□□□□□ -0.4
ECM1-207ENST00000498579 EPM2AB3EWF7 344 aa12.54□□□□□ -0.4
ECM1-207ENST00000498579 IFNA1P01562 189 aa12.54□□□□□ -0.4
ECM1-207ENST00000498579 UBE2D3P61077 147 aa12.54□□□□□ -0.4
ECM1-207ENST00000498579 UBE2D2P62837 147 aa12.54□□□□□ -0.4
ECM1-207ENST00000498579 ZNF56Q15929 161 aa12.54□□□□□ -0.4
ECM1-207ENST00000498579 DAZ4Q86SG3 579 aaKnown RBP12.54□□□□□ -0.4
ECM1-207ENST00000498579 NIT1Q86X76 327 aa12.54□□□□□ -0.4
ECM1-207ENST00000498579 DAZ3Q9NR90 486 aaKnown RBP12.54□□□□□ -0.4
ECM1-207ENST00000498579 A0A087WX48 190 aa12.53□□□□□ -0.4
ECM1-207ENST00000498579 PDE6DO43924 150 aa12.53□□□□□ -0.4
ECM1-207ENST00000498579 SULT1A2P50226 295 aa12.53□□□□□ -0.4
ECM1-207ENST00000498579 XGP55808 180 aa12.53□□□□□ -0.4
ECM1-207ENST00000498579 DAZAP1Q96EP5 407 aaKnown RBP12.53□□□□□ -0.4
ECM1-207ENST00000498579 SMIM17P0DL12 118 aa12.52□□□□□ -0.41
ECM1-207ENST00000498579 RPS20P60866 119 aaKnown RBP12.52□□□□□ -0.41
ECM1-207ENST00000498579 CCL20P78556 96 aa12.52□□□□□ -0.41
ECM1-207ENST00000498579 SLC51BQ86UW2 128 aa12.52□□□□□ -0.41
ECM1-207ENST00000498579 Q8N3U1 123 aa12.52□□□□□ -0.41
ECM1-207ENST00000498579 AP1S3Q96PC3 154 aa12.52□□□□□ -0.41
ECM1-207ENST00000498579 TMEM70Q9BUB7 260 aa12.52□□□□□ -0.41
ECM1-207ENST00000498579 BIN3Q9NQY0 253 aa12.52□□□□□ -0.41
ECM1-207ENST00000498579 XKRY2A2RUG3 117 aa12.51□□□□□ -0.41
ECM1-207ENST00000498579 PKIAP61925 76 aa12.51□□□□□ -0.41
ECM1-207ENST00000498579 MEF2BQ02080 365 aaPredicted RBP12.51□□□□□ -0.41
ECM1-207ENST00000498579 CENPWQ5EE01 88 aa12.51□□□□□ -0.41
ECM1-207ENST00000498579 FRZBQ92765 325 aa12.51□□□□□ -0.41
ECM1-207ENST00000498579 TAGLN2P37802 199 aaKnown RBP12.5□□□□□ -0.41
ECM1-207ENST00000498579 GNG4P50150 75 aa12.5□□□□□ -0.41
ECM1-207ENST00000498579 TMEM97Q5BJF2 176 aa12.5□□□□□ -0.41
ECM1-207ENST00000498579 DERL1Q9BUN8 251 aa12.5□□□□□ -0.41
ECM1-207ENST00000498579 RBFOX3A6NFN3 312 aa12.49□□□□□ -0.41
ECM1-207ENST00000498579 F5H697 171 aa12.49□□□□□ -0.41
ECM1-207ENST00000498579 C1QBP02746 253 aa12.49□□□□□ -0.41
ECM1-207ENST00000498579 Q0VG73 95 aa12.49□□□□□ -0.41
ECM1-207ENST00000498579 NEXN-AS1Q8NBZ9 246 aa12.49□□□□□ -0.41
ECM1-207ENST00000498579 TRBV6-8A0A0A6YYG3 113 aa12.48□□□□□ -0.41
ECM1-207ENST00000498579 FER1L6-AS1Q8NA97 138 aa12.48□□□□□ -0.41
ECM1-207ENST00000498579 KLK12Q9UKR0 248 aa12.48□□□□□ -0.41
ECM1-207ENST00000498579 MUC21A0A0G2JKD1 596 aa12.47□□□□□ -0.41
ECM1-207ENST00000498579 MUC21A0A140T8X8 626 aa12.47□□□□□ -0.41
ECM1-207ENST00000498579 TMEM262E9PQX1 116 aa12.47□□□□□ -0.41
ECM1-207ENST00000498579 BCL2P10415 239 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms