RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 SPINK4O60575 86 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 CA1P00915 261 aaPredicted RBP3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 HLA-DQA1P01909 254 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 GPX1P07203 203 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 ZNF688P0C7X2 276 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 PRB4P10163 310 aaPredicted RBP3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 CRISP2P16562 243 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 G0S2P27469 103 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 TSPOP30536 169 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 LEPP41159 167 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 CRIP1P50238 77 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 RIGQ13278 110 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 OR10J3Q5JRS4 329 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 PSMG4Q5JS54 123 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 MRPL54Q6P161 138 aaKnown RBP3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 ADAMTSL5Q6ZMM2 481 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 NUP35Q8NFH5 326 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 OR2K2Q8NGT1 345 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 PRSS3P2Q8NHM4 247 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 Q8TAT8 98 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 ORAOV1Q8WV07 137 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 ODF3Q96PU9 254 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 SPAG8Q99932 426 aaPredicted RBP3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 UQCR10Q9UDW1 63 aa3.93□□□□□ -1.78
HMGXB4-208ENST00000498325 A0A0J9YX75 114 aa3.92□□□□□ -1.78
HMGXB4-208ENST00000498325 A0A1B0GUT8 65 aa3.92□□□□□ -1.78
HMGXB4-208ENST00000498325 F2Z2F3 143 aa3.92□□□□□ -1.78
HMGXB4-208ENST00000498325 SAP30O75446 220 aa3.92□□□□□ -1.78
HMGXB4-208ENST00000498325 ZNF80P51504 273 aaPredicted RBP3.92□□□□□ -1.78
HMGXB4-208ENST00000498325 FOXI2Q6ZQN5 318 aa3.92□□□□□ -1.78
HMGXB4-208ENST00000498325 BAGE3Q86Y29 109 aa3.92□□□□□ -1.78
HMGXB4-208ENST00000498325 TMEM61Q8N0U2 210 aa3.92□□□□□ -1.78
HMGXB4-208ENST00000498325 KCNS1Q96KK3 526 aa3.92□□□□□ -1.78
HMGXB4-208ENST00000498325 PGLYRP4Q96LB8 373 aa3.92□□□□□ -1.78
HMGXB4-208ENST00000498325 SAMD10Q9BYL1 202 aa3.92□□□□□ -1.78
HMGXB4-208ENST00000498325 SELENOKQ9Y6D0 94 aa3.92□□□□□ -1.78
HMGXB4-208ENST00000498325 TMSB15BA0A087X1C1 80 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 F6UB75 175 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 C3orf84H3BNL1 204 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 APCSP02743 223 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 RNASE4P34096 147 aaKnown RBP3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 CAMPP49913 170 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 DEFB131AP59861 70 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 HBBP68871 147 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 PMCHL1Q16048 86 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 CASC10Q5T4H9 136 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 LYZL1Q6UWQ5 148 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 PET117Q6UWS5 81 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 TMEM136Q6ZRR5 245 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 Q6ZWC4 215 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 APRG1Q8IVJ8 170 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 NRACQ8N912 160 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 FER1L6-AS1Q8NA97 138 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 GTSF1Q8WW33 167 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 FAM19A4Q96LR4 140 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 TPPP3Q9BW30 176 aa3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 MRPS16Q9Y3D3 137 aaKnown RBP3.91□□□□□ -1.78
HMGXB4-208ENST00000498325 FRAS1Q86XX4 4008 aa3.9□□□□□ -1.78
HMGXB4-208ENST00000498325 A0A1B0GXF2 115 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 C7orf71A4D174 169 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 GRIFINA4D1Z8 144 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 KLLNB2CW77 178 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 OR11H12B2RN74 326 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 J3KRW8 73 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 TRIAP1O43715 76 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 SERF1AO75920 110 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 IGLV1-51P01701 117 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 IGLC6P0CF74 106 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 HLA-DRB4P13762 266 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 S100A4P26447 101 aaKnown RBP3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 CDKN1BP46527 198 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 PCP4P48539 62 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 INSL3P51460 131 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 DEFB1P60022 68 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 CACNG7P62955 275 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 FAM159AQ6UWV7 190 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 Q6ZTC4 211 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 SMIM15Q7Z3B0 74 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 TMEM256Q8N2U0 113 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 ZFAND2AQ8N6M9 145 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 FAM110AQ9BQ89 295 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 MAP6D1Q9H9H5 199 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 HLA-DRB4X5D2U9 266 aa3.9□□□□□ -1.79
HMGXB4-208ENST00000498325 TRAV12-3A0A0B4J271 114 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 IGKV3D-20A0A0C4DH25 116 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 KNCNA6PVL3 124 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 A8MTW9 85 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 H3BMM0 161 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 K7EIL1 84 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 K7EP13 123 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 IGKV3-20P01619 116 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 NPSP0C0P6 89 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 ARMS2P0C7Q2 107 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 FRMD6-AS1P0C7T7 363 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 CTRLP40313 264 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 ASIPP42127 132 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 HNRNPA3P51991 378 aaKnown RBP3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 COTL1Q14019 142 aa3.89□□□□□ -1.79
HMGXB4-208ENST00000498325 TWIST1Q15672 202 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms