RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 LAGE3Q14657 143 aa16.3■□□□□ 0.2
HLA-C-209ENST00000495835 A0A1B0GV50 99 aa16.29■□□□□ 0.2
HLA-C-209ENST00000495835 GAGE12JA6NER3 117 aa16.29■□□□□ 0.2
HLA-C-209ENST00000495835 TEX46H3BTG2 121 aa16.29■□□□□ 0.2
HLA-C-209ENST00000495835 GAGE1Q13065 139 aa16.29■□□□□ 0.2
HLA-C-209ENST00000495835 GAGE4Q13068 117 aa16.29■□□□□ 0.2
HLA-C-209ENST00000495835 GAGE5Q13069 117 aa16.29■□□□□ 0.2
HLA-C-209ENST00000495835 GAGE13Q4V321 117 aa16.29■□□□□ 0.2
HLA-C-209ENST00000495835 MAPKAPK5-AS1Q8N8E1 139 aa16.29■□□□□ 0.2
HLA-C-209ENST00000495835 TMSB15BA0A087X1C1 80 aa16.28■□□□□ 0.2
HLA-C-209ENST00000495835 M0R381 172 aa16.27■□□□□ 0.2
HLA-C-209ENST00000495835 PSCAO43653 123 aa16.27■□□□□ 0.2
HLA-C-209ENST00000495835 TCTE3Q8IZS6 198 aa16.27■□□□□ 0.2
HLA-C-209ENST00000495835 C14orf178Q8N769 122 aaPredicted RBP16.27■□□□□ 0.2
HLA-C-209ENST00000495835 TRBV10-1A0A0K0K1A3 114 aa16.26■□□□□ 0.19
HLA-C-209ENST00000495835 FAM74A4Q5TZK3 123 aa16.26■□□□□ 0.19
HLA-C-209ENST00000495835 Q8N1X5 172 aa16.26■□□□□ 0.19
HLA-C-209ENST00000495835 C11orf52Q96A22 123 aa16.25■□□□□ 0.19
HLA-C-209ENST00000495835 SSBP4Q9BWG4 385 aaPredicted RBP16.25■□□□□ 0.19
HLA-C-209ENST00000495835 IGHV3-30P01768 117 aa16.24■□□□□ 0.19
HLA-C-209ENST00000495835 IGHV3-33P01772 117 aa16.24■□□□□ 0.19
HLA-C-209ENST00000495835 IGHV3-30-3P0DP02 117 aa16.24■□□□□ 0.19
HLA-C-209ENST00000495835 IGHV3-30-5P0DP03 117 aa16.24■□□□□ 0.19
HLA-C-209ENST00000495835 Q9UF83 564 aa16.24■□□□□ 0.19
HLA-C-209ENST00000495835 A0A087WWL8 130 aa16.23■□□□□ 0.19
HLA-C-209ENST00000495835 SNAI2O43623 268 aa16.23■□□□□ 0.19
HLA-C-209ENST00000495835 OR5AL1P0C617 328 aa16.23■□□□□ 0.19
HLA-C-209ENST00000495835 RPL35P42766 123 aaKnown RBP16.23■□□□□ 0.19
HLA-C-209ENST00000495835 SULT1A2P50226 295 aa16.23■□□□□ 0.19
HLA-C-209ENST00000495835 TOR2AQ5JU69 321 aa16.23■□□□□ 0.19
HLA-C-209ENST00000495835 TM2D2Q9BX73 214 aa16.23■□□□□ 0.19
HLA-C-209ENST00000495835 KRTAP4-5Q9BYR2 181 aa16.23■□□□□ 0.19
HLA-C-209ENST00000495835 GNG13Q9P2W3 67 aa16.23■□□□□ 0.19
HLA-C-209ENST00000495835 LRCOL1A6NCL2 159 aa16.22■□□□□ 0.19
HLA-C-209ENST00000495835 CCL20P78556 96 aa16.22■□□□□ 0.19
HLA-C-209ENST00000495835 TRAV8-3A0A0A6YYJ7 113 aa16.21■□□□□ 0.19
HLA-C-209ENST00000495835 RAB4BP61018 213 aa16.21■□□□□ 0.19
HLA-C-209ENST00000495835 RPL36AP83881 106 aaKnown RBP16.21■□□□□ 0.19
HLA-C-209ENST00000495835 NTN5Q8WTR8 489 aaPredicted RBP16.21■□□□□ 0.19
HLA-C-209ENST00000495835 RPL36ALQ969Q0 106 aaKnown RBP16.21■□□□□ 0.19
HLA-C-209ENST00000495835 SMIM12Q96EX1 92 aa16.21■□□□□ 0.19
HLA-C-209ENST00000495835 C1QBP02746 253 aa16.2■□□□□ 0.18
HLA-C-209ENST00000495835 RPL19P84098 196 aaKnown RBP16.2■□□□□ 0.18
HLA-C-209ENST00000495835 SLC51BQ86UW2 128 aa16.2■□□□□ 0.18
HLA-C-209ENST00000495835 Q9HAA7 133 aa16.2■□□□□ 0.18
HLA-C-209ENST00000495835 TRBV7-3A0A075B6L6 115 aa16.19■□□□□ 0.18
HLA-C-209ENST00000495835 PRR27Q6MZM9 219 aa16.19■□□□□ 0.18
HLA-C-209ENST00000495835 OR10G8Q8NGN5 311 aa16.19■□□□□ 0.18
HLA-C-209ENST00000495835 OR10AG1Q8NH19 301 aa16.19■□□□□ 0.18
HLA-C-209ENST00000495835 PDE6DO43924 150 aa16.18■□□□□ 0.18
HLA-C-209ENST00000495835 IFNA1P01562 189 aa16.18■□□□□ 0.18
HLA-C-209ENST00000495835 CHCHD7Q9BUK0 85 aa16.18■□□□□ 0.18
HLA-C-209ENST00000495835 COX11Q9Y6N1 276 aa16.18■□□□□ 0.18
HLA-C-209ENST00000495835 GCSHP23434 173 aa16.17■□□□□ 0.18
HLA-C-209ENST00000495835 UBE2D3P61077 147 aa16.17■□□□□ 0.18
HLA-C-209ENST00000495835 UBE2D2P62837 147 aa16.17■□□□□ 0.18
HLA-C-209ENST00000495835 MEF2BQ02080 365 aaPredicted RBP16.17■□□□□ 0.18
HLA-C-209ENST00000495835 SPANXN1Q5VSR9 72 aa16.17■□□□□ 0.18
HLA-C-209ENST00000495835 URGCP-MRPS24S4R325 110 aa16.17■□□□□ 0.18
HLA-C-209ENST00000495835 TAGLN2P37802 199 aaKnown RBP16.16■□□□□ 0.18
HLA-C-209ENST00000495835 Q6ZNX1 250 aa16.16■□□□□ 0.18
HLA-C-209ENST00000495835 NIT1Q86X76 327 aa16.16■□□□□ 0.18
HLA-C-209ENST00000495835 DERL1Q9BUN8 251 aa16.16■□□□□ 0.18
HLA-C-209ENST00000495835 FUSP35637 526 aaKnown RBP eCLIP16.15■□□□□ 0.18
HLA-C-209ENST00000495835 RPS20P60866 119 aaKnown RBP16.15■□□□□ 0.18
HLA-C-209ENST00000495835 DAZ4Q86SG3 579 aaKnown RBP16.15■□□□□ 0.18
HLA-C-209ENST00000495835 Q8N814 137 aa16.15■□□□□ 0.18
HLA-C-209ENST00000495835 DAZAP1Q96EP5 407 aaKnown RBP16.15■□□□□ 0.18
HLA-C-209ENST00000495835 DAZ3Q9NR90 486 aaKnown RBP16.15■□□□□ 0.18
HLA-C-209ENST00000495835 ELOBQ15370 118 aa16.14■□□□□ 0.17
HLA-C-209ENST00000495835 CENPWQ5EE01 88 aa16.14■□□□□ 0.17
HLA-C-209ENST00000495835 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.14■□□□□ 0.17
HLA-C-209ENST00000495835 BIN3Q9NQY0 253 aa16.14■□□□□ 0.17
HLA-C-209ENST00000495835 IGLV5-52A0A0A0MRZ9 124 aa16.13■□□□□ 0.17
HLA-C-209ENST00000495835 IGLV2-8P01709 118 aa16.13■□□□□ 0.17
HLA-C-209ENST00000495835 GNG4P50150 75 aa16.13■□□□□ 0.17
HLA-C-209ENST00000495835 XGP55808 180 aa16.13■□□□□ 0.17
HLA-C-209ENST00000495835 KRTAP10-1P60331 282 aa16.13■□□□□ 0.17
HLA-C-209ENST00000495835 ZNF56Q15929 161 aa16.13■□□□□ 0.17
HLA-C-209ENST00000495835 RMI2Q96E14 147 aa16.13■□□□□ 0.17
HLA-C-209ENST00000495835 Q8N3U1 123 aa16.12■□□□□ 0.17
HLA-C-209ENST00000495835 XKRY2A2RUG3 117 aa16.11■□□□□ 0.17
HLA-C-209ENST00000495835 C19orf71A6NCJ1 209 aa16.11■□□□□ 0.17
HLA-C-209ENST00000495835 SMIM17P0DL12 118 aa16.11■□□□□ 0.17
HLA-C-209ENST00000495835 BCL2P10415 239 aa16.11■□□□□ 0.17
HLA-C-209ENST00000495835 KCNIP4Q6PIL6 250 aa16.11■□□□□ 0.17
HLA-C-209ENST00000495835 NEXN-AS1Q8NBZ9 246 aa16.11■□□□□ 0.17
HLA-C-209ENST00000495835 AP1S3Q96PC3 154 aa16.11■□□□□ 0.17
HLA-C-209ENST00000495835 VAX2Q9UIW0 290 aa16.11■□□□□ 0.17
HLA-C-209ENST00000495835 A0A087WX48 190 aa16.1■□□□□ 0.17
HLA-C-209ENST00000495835 IGLC6P0CF74 106 aa16.1■□□□□ 0.17
HLA-C-209ENST00000495835 TMEM97Q5BJF2 176 aa16.1■□□□□ 0.17
HLA-C-209ENST00000495835 MED9Q9NWA0 146 aa16.1■□□□□ 0.17
HLA-C-209ENST00000495835 KIF25-AS1Q9Y6Z4 181 aa16.1■□□□□ 0.17
HLA-C-209ENST00000495835 TRBV6-8A0A0A6YYG3 113 aa16.09■□□□□ 0.17
HLA-C-209ENST00000495835 RAB19A4D1S5 217 aa16.09■□□□□ 0.17
HLA-C-209ENST00000495835 TMEM70Q9BUB7 260 aa16.09■□□□□ 0.17
HLA-C-209ENST00000495835 F2Z2F3 143 aa16.08■□□□□ 0.16
HLA-C-209ENST00000495835 F5H697 171 aa16.08■□□□□ 0.16
HLA-C-209ENST00000495835 PKIAP61925 76 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms