RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 PRADC1Q9BSG0 188 aa16.1■□□□□ 0.17
CLIC3-203ENST00000494426 RHODO00212 210 aa16.09■□□□□ 0.17
CLIC3-203ENST00000494426 Q9UF83 564 aa16.09■□□□□ 0.17
CLIC3-203ENST00000494426 DNAH2Q9P225 4427 aa16.08■□□□□ 0.17
CLIC3-203ENST00000494426 NBDYA0A0U1RRE5 68 aa16.08■□□□□ 0.16
CLIC3-203ENST00000494426 FAM74A4Q5TZK3 123 aa16.08■□□□□ 0.16
CLIC3-203ENST00000494426 C14orf178Q8N769 122 aaPredicted RBP16.08■□□□□ 0.16
CLIC3-203ENST00000494426 FER1L6-AS1Q8NA97 138 aa16.08■□□□□ 0.16
CLIC3-203ENST00000494426 SMIM7Q9BQ49 75 aa16.08■□□□□ 0.16
CLIC3-203ENST00000494426 LY96Q9Y6Y9 160 aa16.08■□□□□ 0.16
CLIC3-203ENST00000494426 SPANXN1Q5VSR9 72 aa16.07■□□□□ 0.16
CLIC3-203ENST00000494426 ZNF727A8MUV8 499 aa16.06■□□□□ 0.16
CLIC3-203ENST00000494426 SSTP61278 116 aa16.06■□□□□ 0.16
CLIC3-203ENST00000494426 RPP21Q9H633 154 aaKnown RBP16.06■□□□□ 0.16
CLIC3-203ENST00000494426 XKRY2A2RUG3 117 aa16.05■□□□□ 0.16
CLIC3-203ENST00000494426 FAM231DQ6ZW35 169 aa16.05■□□□□ 0.16
CLIC3-203ENST00000494426 SH2D6Q7Z4S9 175 aa16.05■□□□□ 0.16
CLIC3-203ENST00000494426 LINC01551Q86U37 167 aa16.05■□□□□ 0.16
CLIC3-203ENST00000494426 TPPP3Q9BW30 176 aa16.05■□□□□ 0.16
CLIC3-203ENST00000494426 RTL8CO15255 209 aa16.04■□□□□ 0.16
CLIC3-203ENST00000494426 LINC00694P0DN24 101 aa16.04■□□□□ 0.16
CLIC3-203ENST00000494426 PEA15Q15121 130 aa16.04■□□□□ 0.16
CLIC3-203ENST00000494426 KRTAP1-5Q9BYS1 174 aa16.04■□□□□ 0.16
CLIC3-203ENST00000494426 MSRB1Q9NZV6 116 aa16.04■□□□□ 0.16
CLIC3-203ENST00000494426 LYZL1Q6UWQ5 148 aa16.03■□□□□ 0.16
CLIC3-203ENST00000494426 KIF25-AS1Q9Y6Z4 181 aa16.03■□□□□ 0.16
CLIC3-203ENST00000494426 GAGE12JA6NER3 117 aa16.02■□□□□ 0.16
CLIC3-203ENST00000494426 TIRAPP58753 221 aa16.02■□□□□ 0.16
CLIC3-203ENST00000494426 GAGE1Q13065 139 aa16.02■□□□□ 0.16
CLIC3-203ENST00000494426 GAGE4Q13068 117 aa16.02■□□□□ 0.16
CLIC3-203ENST00000494426 GAGE5Q13069 117 aa16.02■□□□□ 0.16
CLIC3-203ENST00000494426 GAGE13Q4V321 117 aa16.02■□□□□ 0.16
CLIC3-203ENST00000494426 SMDT1Q9H4I9 107 aa16.02■□□□□ 0.16
CLIC3-203ENST00000494426 FRAS1Q86XX4 4008 aa16.01■□□□□ 0.15
CLIC3-203ENST00000494426 A0A1W2PPQ1 181 aa16.01■□□□□ 0.15
CLIC3-203ENST00000494426 F2Z2F3 143 aa16.01■□□□□ 0.15
CLIC3-203ENST00000494426 SIVA1O15304 175 aa16.01■□□□□ 0.15
CLIC3-203ENST00000494426 GATCO43716 136 aaKnown RBP16.01■□□□□ 0.15
CLIC3-203ENST00000494426 LINC00315P59091 139 aa16.01■□□□□ 0.15
CLIC3-203ENST00000494426 CACNG7P62955 275 aa16.01■□□□□ 0.15
CLIC3-203ENST00000494426 IFITM2Q01629 132 aa16.01■□□□□ 0.15
CLIC3-203ENST00000494426 DNAH17Q9UFH2 4485 aa16■□□□□ 0.15
CLIC3-203ENST00000494426 WFDC10BQ8IUB3 73 aa16■□□□□ 0.15
CLIC3-203ENST00000494426 ATP6V0E2Q8NHE4 81 aa16■□□□□ 0.15
CLIC3-203ENST00000494426 GTSF1Q8WW33 167 aa16■□□□□ 0.15
CLIC3-203ENST00000494426 CTRLP40313 264 aa15.99■□□□□ 0.15
CLIC3-203ENST00000494426 ERVFC1-1P60608 527 aa15.99■□□□□ 0.15
CLIC3-203ENST00000494426 RAB4BP61018 213 aa15.99■□□□□ 0.15
CLIC3-203ENST00000494426 TMEM241Q24JQ0 296 aa15.99■□□□□ 0.15
CLIC3-203ENST00000494426 FAM74A3Q4VXF1 159 aa15.99■□□□□ 0.15
CLIC3-203ENST00000494426 NTF3P20783 257 aa15.98■□□□□ 0.15
CLIC3-203ENST00000494426 C1orf134Q5TEV5 83 aa15.98■□□□□ 0.15
CLIC3-203ENST00000494426 WDR73Q6P4I2 378 aa15.98■□□□□ 0.15
CLIC3-203ENST00000494426 AP1S3Q96PC3 154 aa15.98■□□□□ 0.15
CLIC3-203ENST00000494426 RAB14P61106 215 aa15.97■□□□□ 0.15
CLIC3-203ENST00000494426 RPL23P62829 140 aaKnown RBP15.97■□□□□ 0.15
CLIC3-203ENST00000494426 ZNF56Q15929 161 aa15.97■□□□□ 0.15
CLIC3-203ENST00000494426 CNFNQ9BYD5 112 aa15.97■□□□□ 0.15
CLIC3-203ENST00000494426 GTSF1LQ9H1H1 148 aa15.97■□□□□ 0.15
CLIC3-203ENST00000494426 TRBV10-1A0A0K0K1A3 114 aa15.96■□□□□ 0.15
CLIC3-203ENST00000494426 CT83Q5H943 113 aa15.96■□□□□ 0.15
CLIC3-203ENST00000494426 TTC32Q5I0X7 151 aa15.96■□□□□ 0.15
CLIC3-203ENST00000494426 LINC00336Q6ZUF6 198 aa15.96■□□□□ 0.15
CLIC3-203ENST00000494426 OSTCQ9NRP0 149 aa15.96■□□□□ 0.15
CLIC3-203ENST00000494426 A8MWL6 223 aa15.95■□□□□ 0.14
CLIC3-203ENST00000494426 C6orf223Q8N319 242 aa15.95■□□□□ 0.14
CLIC3-203ENST00000494426 ISOC2Q96AB3 205 aa15.95■□□□□ 0.14
CLIC3-203ENST00000494426 NAT8Q9UHE5 227 aa15.95■□□□□ 0.14
CLIC3-203ENST00000494426 FAT2Q9NYQ8 4349 aa15.94■□□□□ 0.14
CLIC3-203ENST00000494426 SMIM17P0DL12 118 aa15.94■□□□□ 0.14
CLIC3-203ENST00000494426 EVI2AP22794 236 aa15.94■□□□□ 0.14
CLIC3-203ENST00000494426 FOXA3P55318 350 aaPredicted RBP15.94■□□□□ 0.14
CLIC3-203ENST00000494426 CLLU1Q5K131 121 aa15.94■□□□□ 0.14
CLIC3-203ENST00000494426 LELP1Q5T871 98 aa15.94■□□□□ 0.14
CLIC3-203ENST00000494426 F5H697 171 aa15.93■□□□□ 0.14
CLIC3-203ENST00000494426 DNAH10OSP0CZ25 163 aa15.93■□□□□ 0.14
CLIC3-203ENST00000494426 NEXN-AS1Q8NBZ9 246 aa15.93■□□□□ 0.14
CLIC3-203ENST00000494426 OR10G8Q8NGN5 311 aa15.93■□□□□ 0.14
CLIC3-203ENST00000494426 PRSS29PA6NIE9 313 aa15.92■□□□□ 0.14
CLIC3-203ENST00000494426 UBE2D3P61077 147 aa15.92■□□□□ 0.14
CLIC3-203ENST00000494426 UBE2D2P62837 147 aa15.92■□□□□ 0.14
CLIC3-203ENST00000494426 SOHLH1Q5JUK2 328 aa15.92■□□□□ 0.14
CLIC3-203ENST00000494426 V9GYV3 84 aa15.92■□□□□ 0.14
CLIC3-203ENST00000494426 TRBV7-3A0A075B6L6 115 aa15.91■□□□□ 0.14
CLIC3-203ENST00000494426 TRGC1P0CF51 173 aa15.91■□□□□ 0.14
CLIC3-203ENST00000494426 RPL36AP83881 106 aaKnown RBP15.91■□□□□ 0.14
CLIC3-203ENST00000494426 TWIST1Q15672 202 aa15.91■□□□□ 0.14
CLIC3-203ENST00000494426 ADIRFQ15847 76 aa15.91■□□□□ 0.14
CLIC3-203ENST00000494426 TSKUQ8WUA8 353 aa15.91■□□□□ 0.14
CLIC3-203ENST00000494426 RPL36ALQ969Q0 106 aaKnown RBP15.91■□□□□ 0.14
CLIC3-203ENST00000494426 PGLYRP4Q96LB8 373 aa15.91■□□□□ 0.14
CLIC3-203ENST00000494426 TRAV8-6A0A0B4J262 113 aa15.9■□□□□ 0.14
CLIC3-203ENST00000494426 MGPP08493 103 aa15.9■□□□□ 0.14
CLIC3-203ENST00000494426 OR10J3Q5JRS4 329 aa15.9■□□□□ 0.14
CLIC3-203ENST00000494426 DPH3P1Q9H4G8 78 aa15.9■□□□□ 0.14
CLIC3-203ENST00000494426 IGHV3-38A0A0C4DH36 116 aa15.89■□□□□ 0.13
CLIC3-203ENST00000494426 A0A1B0GVY2 172 aa15.89■□□□□ 0.13
CLIC3-203ENST00000494426 SUMO4Q6EEV6 95 aa15.89■□□□□ 0.13
CLIC3-203ENST00000494426 C15orf54Q8N8G6 183 aa15.89■□□□□ 0.13
CLIC3-203ENST00000494426 GFRA4Q9GZZ7 299 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms