RNA–Protein interactions for RNA: ENST00000493306.1

KLF4-204, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 2,706 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-204ENST00000493306 NTN5Q8WTR8 489 aaPredicted RBP12.42□□□□□ -0.42
KLF4-204ENST00000493306 AMELXQ99217 191 aa12.42□□□□□ -0.42
KLF4-204ENST00000493306 A0A0B4J2C4 111 aa12.41□□□□□ -0.42
KLF4-204ENST00000493306 RNASE3P12724 160 aaKnown RBP12.41□□□□□ -0.42
KLF4-204ENST00000493306 ATXN8Q156A1 80 aa12.41□□□□□ -0.42
KLF4-204ENST00000493306 DEFB104AQ8WTQ1 72 aa12.41□□□□□ -0.42
KLF4-204ENST00000493306 CSMD1Q96PZ7 3565 aa12.41□□□□□ -0.42
KLF4-204ENST00000493306 TRAV4A0A0B4J268 109 aa12.41□□□□□ -0.42
KLF4-204ENST00000493306 PF4V1P10720 104 aa12.41□□□□□ -0.42
KLF4-204ENST00000493306 POLR2KP53803 58 aaKnown RBP12.41□□□□□ -0.42
KLF4-204ENST00000493306 TMEM263Q8WUH6 116 aaKnown RBP12.41□□□□□ -0.42
KLF4-204ENST00000493306 TRAV2A0A0B4J234 112 aa12.4□□□□□ -0.42
KLF4-204ENST00000493306 IFITM1P13164 125 aa12.4□□□□□ -0.42
KLF4-204ENST00000493306 Q8N1Y9 231 aa12.4□□□□□ -0.42
KLF4-204ENST00000493306 ACACAQ13085 2346 aa12.4□□□□□ -0.43
KLF4-204ENST00000493306 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.39□□□□□ -0.43
KLF4-204ENST00000493306 ATP5J2P56134 94 aa12.39□□□□□ -0.43
KLF4-204ENST00000493306 LINC01620Q4KN68 170 aa12.39□□□□□ -0.43
KLF4-204ENST00000493306 SPANXA1Q9NS26 97 aa12.39□□□□□ -0.43
KLF4-204ENST00000493306 VPREB3Q9UKI3 123 aa12.39□□□□□ -0.43
KLF4-204ENST00000493306 TRAV8-4A0A0B4J246 113 aa12.39□□□□□ -0.43
KLF4-204ENST00000493306 F5H697 171 aa12.39□□□□□ -0.43
KLF4-204ENST00000493306 LEPROTO15243 131 aa12.39□□□□□ -0.43
KLF4-204ENST00000493306 NXPH4O95158 308 aa12.39□□□□□ -0.43
KLF4-204ENST00000493306 Q6Q795 121 aa12.39□□□□□ -0.43
KLF4-204ENST00000493306 KIF25-AS1Q9Y6Z4 181 aa12.39□□□□□ -0.43
KLF4-204ENST00000493306 SDHAF1A6NFY7 115 aa12.38□□□□□ -0.43
KLF4-204ENST00000493306 LINC00315P59091 139 aa12.38□□□□□ -0.43
KLF4-204ENST00000493306 SUMO4Q6EEV6 95 aa12.38□□□□□ -0.43
KLF4-204ENST00000493306 CRLF1O75462 422 aa12.38□□□□□ -0.43
KLF4-204ENST00000493306 PIEZO2Q9H5I5 2752 aa12.37□□□□□ -0.43
KLF4-204ENST00000493306 DEFB1P60022 68 aa12.37□□□□□ -0.43
KLF4-204ENST00000493306 TCF15Q12870 199 aa12.37□□□□□ -0.43
KLF4-204ENST00000493306 MUSTN1Q8IVN3 82 aa12.37□□□□□ -0.43
KLF4-204ENST00000493306 IGHV4-39P01824 125 aa12.37□□□□□ -0.43
KLF4-204ENST00000493306 DEFB123Q8N688 67 aa12.37□□□□□ -0.43
KLF4-204ENST00000493306 ANKHD1Q8IWZ3 2542 aaKnown RBP12.37□□□□□ -0.43
KLF4-204ENST00000493306 MUC4Q99102 2169 aa12.36□□□□□ -0.43
KLF4-204ENST00000493306 EIF4EBP3O60516 100 aaPredicted RBP12.36□□□□□ -0.43
KLF4-204ENST00000493306 RPL13AP40429 203 aaKnown RBP12.36□□□□□ -0.43
KLF4-204ENST00000493306 TMEM223A0PJW6 202 aa12.36□□□□□ -0.43
KLF4-204ENST00000493306 BDP1A6H8Y1 2624 aa12.36□□□□□ -0.43
KLF4-204ENST00000493306 CCDC179H3BU77 68 aa12.35□□□□□ -0.43
KLF4-204ENST00000493306 RPL11P62913 178 aaKnown RBP12.35□□□□□ -0.43
KLF4-204ENST00000493306 APRG1Q8IVJ8 170 aa12.35□□□□□ -0.43
KLF4-204ENST00000493306 Q8NA96 180 aa12.35□□□□□ -0.43
KLF4-204ENST00000493306 FAM19A4Q96LR4 140 aa12.35□□□□□ -0.43
KLF4-204ENST00000493306 A0A087WWL8 130 aa12.35□□□□□ -0.43
KLF4-204ENST00000493306 TRBV27A0A0K0K1C4 114 aa12.35□□□□□ -0.43
KLF4-204ENST00000493306 TRBV10-2A0A0K0K1G8 114 aa12.35□□□□□ -0.43
KLF4-204ENST00000493306 TEX49A0A1B0GTD5 131 aa12.35□□□□□ -0.43
KLF4-204ENST00000493306 H3BMM0 161 aa12.35□□□□□ -0.43
KLF4-204ENST00000493306 UBE2WQ96B02 151 aa12.35□□□□□ -0.43
KLF4-204ENST00000493306 BEX4Q9NWD9 120 aaPredicted RBP12.35□□□□□ -0.43
KLF4-204ENST00000493306 GVINP1Q7Z2Y8 2422 aa12.35□□□□□ -0.43
KLF4-204ENST00000493306 OTOGLQ3ZCN5 2332 aa12.35□□□□□ -0.43
KLF4-204ENST00000493306 LAMA5O15230 3695 aa12.34□□□□□ -0.43
KLF4-204ENST00000493306 F6UB75 175 aa12.34□□□□□ -0.43
KLF4-204ENST00000493306 SOCS3O14543 225 aa12.34□□□□□ -0.43
KLF4-204ENST00000493306 C5orf47Q569G3 176 aa12.34□□□□□ -0.43
KLF4-204ENST00000493306 FAM159AQ6UWV7 190 aa12.34□□□□□ -0.43
KLF4-204ENST00000493306 C15orf53Q8NAA6 179 aa12.34□□□□□ -0.43
KLF4-204ENST00000493306 JPT2Q9H910 190 aa12.34□□□□□ -0.43
KLF4-204ENST00000493306 IGHV1-69P01742 117 aa12.34□□□□□ -0.43
KLF4-204ENST00000493306 LINC01600Q96MT4 127 aa12.34□□□□□ -0.43
KLF4-204ENST00000493306 ZNF256Q9Y2P7 627 aaPredicted RBP12.34□□□□□ -0.43
KLF4-204ENST00000493306 IGHV3-64A0A075B6Q5 118 aa12.33□□□□□ -0.44
KLF4-204ENST00000493306 ODF3Q96PU9 254 aa12.33□□□□□ -0.44
KLF4-204ENST00000493306 TRBV30A0A0K0K1B3 111 aa12.33□□□□□ -0.44
KLF4-204ENST00000493306 FAM223BA6NKX1 122 aa12.33□□□□□ -0.44
KLF4-204ENST00000493306 M0R2P5 195 aa12.33□□□□□ -0.44
KLF4-204ENST00000493306 ELANEP08246 267 aa12.33□□□□□ -0.44
KLF4-204ENST00000493306 FAM223AQ8IWN6 122 aa12.33□□□□□ -0.44
KLF4-204ENST00000493306 SIRPDQ9H106 197 aa12.33□□□□□ -0.44
KLF4-204ENST00000493306 ZFP36P26651 326 aaKnown RBP12.32□□□□□ -0.44
KLF4-204ENST00000493306 TRBV6-5A0A0K0K1A5 114 aa12.32□□□□□ -0.44
KLF4-204ENST00000493306 UBE2E1P51965 193 aa12.32□□□□□ -0.44
KLF4-204ENST00000493306 PRR30Q53SZ7 412 aaPredicted RBP12.32□□□□□ -0.44
KLF4-204ENST00000493306 UNQ9165/PRO28630Q6UXU0 137 aa12.32□□□□□ -0.44
KLF4-204ENST00000493306 ANKRD11Q6UB99 2663 aaPredicted RBP12.32□□□□□ -0.44
KLF4-204ENST00000493306 FAM74A4Q5TZK3 123 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 PPDPFQ9H3Y8 114 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 A0A0J9YX75 114 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 ZNF22P17026 224 aaPredicted RBP12.31□□□□□ -0.44
KLF4-204ENST00000493306 SAA4P35542 130 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 RHOHQ15669 191 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 C2orf82Q6UX34 121 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 OPRPNQ99935 248 aaPredicted RBP12.31□□□□□ -0.44
KLF4-204ENST00000493306 DMXL1Q9Y485 3027 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 MED13LQ71F56 2210 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 IGKV3-7A0A075B6H7 116 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 TRAV41A0A0B4J266 112 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 LGALS9O00182 355 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 NDUFA4O00483 81 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 TRIAP1O43715 76 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 GRNP28799 593 aaKnown RBP12.31□□□□□ -0.44
KLF4-204ENST00000493306 NSUN5P1Q3KNT7 163 aa12.31□□□□□ -0.44
KLF4-204ENST00000493306 C5orf56Q8N8D9 126 aa12.3□□□□□ -0.44
KLF4-204ENST00000493306 A0A0J9YXY3 114 aa12.29□□□□□ -0.44
KLF4-204ENST00000493306 ZNF56Q15929 161 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms