RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 NUDT11Q96G61 164 aa8.83□□□□□ -1
CLIP2-209ENST00000493166 RPP21Q9H633 154 aaKnown RBP8.83□□□□□ -1
CLIP2-209ENST00000493166 MRPS16Q9Y3D3 137 aaKnown RBP8.83□□□□□ -1
CLIP2-209ENST00000493166 LY96Q9Y6Y9 160 aa8.83□□□□□ -1
CLIP2-209ENST00000493166 IGLC6P0CF74 106 aa8.82□□□□□ -1
CLIP2-209ENST00000493166 UFSP1Q6NVU6 142 aa8.82□□□□□ -1
CLIP2-209ENST00000493166 SH2D6Q7Z4S9 175 aa8.82□□□□□ -1
CLIP2-209ENST00000493166 UPK3BQ9BT76 320 aa8.82□□□□□ -1
CLIP2-209ENST00000493166 DNAH10Q8IVF4 4471 aa8.82□□□□□ -1
CLIP2-209ENST00000493166 LYPD5Q6UWN5 251 aa8.81□□□□□ -1
CLIP2-209ENST00000493166 Q6ZSN1 163 aa8.81□□□□□ -1
CLIP2-209ENST00000493166 SMDT1Q9H4I9 107 aa8.81□□□□□ -1
CLIP2-209ENST00000493166 Q9H8V8 135 aa8.81□□□□□ -1
CLIP2-209ENST00000493166 DNAH2Q9P225 4427 aa8.81□□□□□ -1
CLIP2-209ENST00000493166 A0A1W2PPQ1 181 aa8.8□□□□□ -1
CLIP2-209ENST00000493166 C9JQL5 133 aa8.8□□□□□ -1
CLIP2-209ENST00000493166 F2Z2F3 143 aa8.8□□□□□ -1
CLIP2-209ENST00000493166 GATCO43716 136 aaKnown RBP8.8□□□□□ -1
CLIP2-209ENST00000493166 CRYGDP07320 174 aa8.8□□□□□ -1
CLIP2-209ENST00000493166 ERVFC1-1P60608 527 aa8.8□□□□□ -1
CLIP2-209ENST00000493166 CACNG7P62955 275 aa8.8□□□□□ -1
CLIP2-209ENST00000493166 SRSF3P84103 164 aaKnown RBP8.8□□□□□ -1
CLIP2-209ENST00000493166 FAM74A3Q4VXF1 159 aa8.8□□□□□ -1
CLIP2-209ENST00000493166 FAM231DQ6ZW35 169 aa8.8□□□□□ -1
CLIP2-209ENST00000493166 LINC01551Q86U37 167 aa8.8□□□□□ -1
CLIP2-209ENST00000493166 C14orf178Q8N769 122 aaPredicted RBP8.8□□□□□ -1
CLIP2-209ENST00000493166 AP1S3Q96PC3 154 aa8.8□□□□□ -1
CLIP2-209ENST00000493166 NBDYA0A0U1RRE5 68 aa8.79□□□□□ -1
CLIP2-209ENST00000493166 SMIM17P0DL12 118 aa8.79□□□□□ -1
CLIP2-209ENST00000493166 ZNF56Q15929 161 aa8.79□□□□□ -1
CLIP2-209ENST00000493166 LYZL1Q6UWQ5 148 aa8.79□□□□□ -1
CLIP2-209ENST00000493166 Q6ZR54 194 aa8.79□□□□□ -1
CLIP2-209ENST00000493166 GAGE12JA6NER3 117 aa8.78□□□□□ -1
CLIP2-209ENST00000493166 CTRLP40313 264 aa8.78□□□□□ -1
CLIP2-209ENST00000493166 RAB4BP61018 213 aa8.78□□□□□ -1
CLIP2-209ENST00000493166 GAGE1Q13065 139 aa8.78□□□□□ -1
CLIP2-209ENST00000493166 GAGE4Q13068 117 aa8.78□□□□□ -1
CLIP2-209ENST00000493166 GAGE5Q13069 117 aa8.78□□□□□ -1
CLIP2-209ENST00000493166 TMEM241Q24JQ0 296 aa8.78□□□□□ -1
CLIP2-209ENST00000493166 GAGE13Q4V321 117 aa8.78□□□□□ -1
CLIP2-209ENST00000493166 A8MWL6 223 aa8.77□□□□□ -1.01
CLIP2-209ENST00000493166 SIVA1O15304 175 aa8.77□□□□□ -1.01
CLIP2-209ENST00000493166 TTC32Q5I0X7 151 aa8.77□□□□□ -1.01
CLIP2-209ENST00000493166 SOHLH1Q5JUK2 328 aa8.77□□□□□ -1.01
CLIP2-209ENST00000493166 ATP6V0E2Q8NHE4 81 aa8.77□□□□□ -1.01
CLIP2-209ENST00000493166 NAT8Q9UHE5 227 aa8.77□□□□□ -1.01
CLIP2-209ENST00000493166 TRBV10-1A0A0K0K1A3 114 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 F5H697 171 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 TRGC1P0CF51 173 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 TIRAPP58753 221 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 RPL23P62829 140 aaKnown RBP8.76□□□□□ -1.01
CLIP2-209ENST00000493166 IFITM2Q01629 132 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 ADIRFQ15847 76 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 CT83Q5H943 113 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 CLLU1Q5K131 121 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 WDR73Q6P4I2 378 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 C15orf54Q8N8G6 183 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 GTSF1Q8WW33 167 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 OSTCQ9NRP0 149 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 MSRB1Q9NZV6 116 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 Q9UF83 564 aa8.76□□□□□ -1.01
CLIP2-209ENST00000493166 MGPP08493 103 aa8.75□□□□□ -1.01
CLIP2-209ENST00000493166 LINC00694P0DN24 101 aa8.75□□□□□ -1.01
CLIP2-209ENST00000493166 NTF3P20783 257 aa8.75□□□□□ -1.01
CLIP2-209ENST00000493166 RPL36AP83881 106 aaKnown RBP8.75□□□□□ -1.01
CLIP2-209ENST00000493166 TWIST1Q15672 202 aa8.75□□□□□ -1.01
CLIP2-209ENST00000493166 C1orf134Q5TEV5 83 aa8.75□□□□□ -1.01
CLIP2-209ENST00000493166 WFDC10BQ8IUB3 73 aa8.75□□□□□ -1.01
CLIP2-209ENST00000493166 RPL36ALQ969Q0 106 aaKnown RBP8.75□□□□□ -1.01
CLIP2-209ENST00000493166 ISOC2Q96AB3 205 aa8.75□□□□□ -1.01
CLIP2-209ENST00000493166 CNFNQ9BYD5 112 aa8.75□□□□□ -1.01
CLIP2-209ENST00000493166 GTSF1LQ9H1H1 148 aa8.75□□□□□ -1.01
CLIP2-209ENST00000493166 KIF25-AS1Q9Y6Z4 181 aa8.75□□□□□ -1.01
CLIP2-209ENST00000493166 OR10J3Q5JRS4 329 aa8.74□□□□□ -1.01
CLIP2-209ENST00000493166 PGLYRP4Q96LB8 373 aa8.74□□□□□ -1.01
CLIP2-209ENST00000493166 DNAH17Q9UFH2 4485 aa8.74□□□□□ -1.01
CLIP2-209ENST00000493166 TRBV7-3A0A075B6L6 115 aa8.73□□□□□ -1.01
CLIP2-209ENST00000493166 TRAV8-6A0A0B4J262 113 aa8.73□□□□□ -1.01
CLIP2-209ENST00000493166 EVI2AP22794 236 aa8.73□□□□□ -1.01
CLIP2-209ENST00000493166 LELP1Q5T871 98 aa8.73□□□□□ -1.01
CLIP2-209ENST00000493166 LINC00336Q6ZUF6 198 aa8.73□□□□□ -1.01
CLIP2-209ENST00000493166 C6orf223Q8N319 242 aa8.73□□□□□ -1.01
CLIP2-209ENST00000493166 TSKUQ8WUA8 353 aa8.73□□□□□ -1.01
CLIP2-209ENST00000493166 BORCS7Q96B45 105 aa8.73□□□□□ -1.01
CLIP2-209ENST00000493166 KRTAP1-5Q9BYS1 174 aa8.73□□□□□ -1.01
CLIP2-209ENST00000493166 DPH3P1Q9H4G8 78 aa8.73□□□□□ -1.01
CLIP2-209ENST00000493166 FAT2Q9NYQ8 4349 aa8.72□□□□□ -1.01
CLIP2-209ENST00000493166 HIGD1CA8MV81 97 aa8.72□□□□□ -1.01
CLIP2-209ENST00000493166 RTL8CO15255 209 aa8.72□□□□□ -1.01
CLIP2-209ENST00000493166 LINC00315P59091 139 aa8.72□□□□□ -1.01
CLIP2-209ENST00000493166 SMIM15Q7Z3B0 74 aa8.72□□□□□ -1.01
CLIP2-209ENST00000493166 NEXN-AS1Q8NBZ9 246 aa8.72□□□□□ -1.01
CLIP2-209ENST00000493166 OR10G8Q8NGN5 311 aa8.72□□□□□ -1.01
CLIP2-209ENST00000493166 GFRA4Q9GZZ7 299 aa8.72□□□□□ -1.01
CLIP2-209ENST00000493166 V9GYV3 84 aa8.72□□□□□ -1.01
CLIP2-209ENST00000493166 TRAV9-2A0A087WT02 112 aa8.71□□□□□ -1.02
CLIP2-209ENST00000493166 IGHV3-38A0A0C4DH36 116 aa8.71□□□□□ -1.02
CLIP2-209ENST00000493166 FAM231BA6NCW3 169 aa8.71□□□□□ -1.02
CLIP2-209ENST00000493166 H7C1H1 209 aa8.71□□□□□ -1.02
CLIP2-209ENST00000493166 DNAH10OSP0CZ25 163 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms