RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 ZNF727A8MUV8 499 aa17.74■□□□□ 0.43
TTC3-223ENST00000492275 RHODO00212 210 aa17.74■□□□□ 0.43
TTC3-223ENST00000492275 FAM74A4Q5TZK3 123 aa17.74■□□□□ 0.43
TTC3-223ENST00000492275 FER1L6-AS1Q8NA97 138 aa17.74■□□□□ 0.43
TTC3-223ENST00000492275 SSTP61278 116 aa17.73■□□□□ 0.43
TTC3-223ENST00000492275 SPANXN1Q5VSR9 72 aa17.73■□□□□ 0.43
TTC3-223ENST00000492275 C14orf178Q8N769 122 aaPredicted RBP17.73■□□□□ 0.43
TTC3-223ENST00000492275 Q9UF83 564 aa17.73■□□□□ 0.43
TTC3-223ENST00000492275 XKRY2A2RUG3 117 aa17.72■□□□□ 0.43
TTC3-223ENST00000492275 PEA15Q15121 130 aa17.72■□□□□ 0.43
TTC3-223ENST00000492275 RPP21Q9H633 154 aaKnown RBP17.72■□□□□ 0.43
TTC3-223ENST00000492275 DNAH10Q8IVF4 4471 aa17.71■□□□□ 0.43
TTC3-223ENST00000492275 LINC01551Q86U37 167 aa17.71■□□□□ 0.43
TTC3-223ENST00000492275 TPPP3Q9BW30 176 aa17.71■□□□□ 0.43
TTC3-223ENST00000492275 NBDYA0A0U1RRE5 68 aa17.7■□□□□ 0.42
TTC3-223ENST00000492275 FAM231DQ6ZW35 169 aa17.7■□□□□ 0.42
TTC3-223ENST00000492275 SH2D6Q7Z4S9 175 aa17.7■□□□□ 0.42
TTC3-223ENST00000492275 LYZL1Q6UWQ5 148 aa17.69■□□□□ 0.42
TTC3-223ENST00000492275 SMDT1Q9H4I9 107 aa17.69■□□□□ 0.42
TTC3-223ENST00000492275 MSRB1Q9NZV6 116 aa17.69■□□□□ 0.42
TTC3-223ENST00000492275 IFITM2Q01629 132 aa17.68■□□□□ 0.42
TTC3-223ENST00000492275 KIF25-AS1Q9Y6Z4 181 aa17.68■□□□□ 0.42
TTC3-223ENST00000492275 A0A1W2PPQ1 181 aa17.67■□□□□ 0.42
TTC3-223ENST00000492275 F2Z2F3 143 aa17.67■□□□□ 0.42
TTC3-223ENST00000492275 GATCO43716 136 aaKnown RBP17.67■□□□□ 0.42
TTC3-223ENST00000492275 FAM74A3Q4VXF1 159 aa17.67■□□□□ 0.42
TTC3-223ENST00000492275 GAGE12JA6NER3 117 aa17.66■□□□□ 0.42
TTC3-223ENST00000492275 LINC00694P0DN24 101 aa17.66■□□□□ 0.42
TTC3-223ENST00000492275 ERVFC1-1P60608 527 aa17.66■□□□□ 0.42
TTC3-223ENST00000492275 RAB14P61106 215 aa17.66■□□□□ 0.42
TTC3-223ENST00000492275 CACNG7P62955 275 aa17.66■□□□□ 0.42
TTC3-223ENST00000492275 GAGE1Q13065 139 aa17.66■□□□□ 0.42
TTC3-223ENST00000492275 GAGE4Q13068 117 aa17.66■□□□□ 0.42
TTC3-223ENST00000492275 GAGE5Q13069 117 aa17.66■□□□□ 0.42
TTC3-223ENST00000492275 GAGE13Q4V321 117 aa17.66■□□□□ 0.42
TTC3-223ENST00000492275 TIRAPP58753 221 aa17.65■□□□□ 0.42
TTC3-223ENST00000492275 TMEM241Q24JQ0 296 aa17.65■□□□□ 0.42
TTC3-223ENST00000492275 GTSF1Q8WW33 167 aa17.65■□□□□ 0.42
TTC3-223ENST00000492275 KRTAP1-5Q9BYS1 174 aa17.65■□□□□ 0.42
TTC3-223ENST00000492275 RTL8CO15255 209 aa17.64■□□□□ 0.41
TTC3-223ENST00000492275 SIVA1O15304 175 aa17.64■□□□□ 0.41
TTC3-223ENST00000492275 CTRLP40313 264 aa17.64■□□□□ 0.41
TTC3-223ENST00000492275 LINC00315P59091 139 aa17.64■□□□□ 0.41
TTC3-223ENST00000492275 RAB4BP61018 213 aa17.64■□□□□ 0.41
TTC3-223ENST00000492275 ATP6V0E2Q8NHE4 81 aa17.64■□□□□ 0.41
TTC3-223ENST00000492275 WDR73Q6P4I2 378 aa17.63■□□□□ 0.41
TTC3-223ENST00000492275 AP1S3Q96PC3 154 aa17.63■□□□□ 0.41
TTC3-223ENST00000492275 DNAH2Q9P225 4427 aa17.63■□□□□ 0.41
TTC3-223ENST00000492275 FRAS1Q86XX4 4008 aa17.63■□□□□ 0.41
TTC3-223ENST00000492275 NTF3P20783 257 aa17.62■□□□□ 0.41
TTC3-223ENST00000492275 RPL23P62829 140 aaKnown RBP17.62■□□□□ 0.41
TTC3-223ENST00000492275 ZNF56Q15929 161 aa17.62■□□□□ 0.41
TTC3-223ENST00000492275 CLLU1Q5K131 121 aa17.62■□□□□ 0.41
TTC3-223ENST00000492275 OSTCQ9NRP0 149 aa17.62■□□□□ 0.41
TTC3-223ENST00000492275 A8MWL6 223 aa17.61■□□□□ 0.41
TTC3-223ENST00000492275 CT83Q5H943 113 aa17.61■□□□□ 0.41
TTC3-223ENST00000492275 WFDC10BQ8IUB3 73 aa17.61■□□□□ 0.41
TTC3-223ENST00000492275 ISOC2Q96AB3 205 aa17.61■□□□□ 0.41
TTC3-223ENST00000492275 CNFNQ9BYD5 112 aa17.61■□□□□ 0.41
TTC3-223ENST00000492275 GTSF1LQ9H1H1 148 aa17.61■□□□□ 0.41
TTC3-223ENST00000492275 NAT8Q9UHE5 227 aa17.61■□□□□ 0.41
TTC3-223ENST00000492275 EPPK1P58107 5090 aaKnown RBP17.61■□□□□ 0.41
TTC3-223ENST00000492275 TRBV10-1A0A0K0K1A3 114 aa17.6■□□□□ 0.41
TTC3-223ENST00000492275 C1orf134Q5TEV5 83 aa17.6■□□□□ 0.41
TTC3-223ENST00000492275 SMIM17P0DL12 118 aa17.59■□□□□ 0.41
TTC3-223ENST00000492275 SOHLH1Q5JUK2 328 aa17.59■□□□□ 0.41
TTC3-223ENST00000492275 F5H697 171 aa17.58■□□□□ 0.4
TTC3-223ENST00000492275 EVI2AP22794 236 aa17.58■□□□□ 0.4
TTC3-223ENST00000492275 FOXA3P55318 350 aaPredicted RBP17.58■□□□□ 0.4
TTC3-223ENST00000492275 TTC32Q5I0X7 151 aa17.58■□□□□ 0.4
TTC3-223ENST00000492275 V9GYV3 84 aa17.57■□□□□ 0.4
TTC3-223ENST00000492275 DNAH17Q9UFH2 4485 aa17.57■□□□□ 0.4
TTC3-223ENST00000492275 TRGC1P0CF51 173 aa17.56■□□□□ 0.4
TTC3-223ENST00000492275 TWIST1Q15672 202 aa17.56■□□□□ 0.4
TTC3-223ENST00000492275 ADIRFQ15847 76 aa17.56■□□□□ 0.4
TTC3-223ENST00000492275 LELP1Q5T871 98 aa17.56■□□□□ 0.4
TTC3-223ENST00000492275 LINC00336Q6ZUF6 198 aa17.56■□□□□ 0.4
TTC3-223ENST00000492275 C6orf223Q8N319 242 aa17.56■□□□□ 0.4
TTC3-223ENST00000492275 OR10G8Q8NGN5 311 aa17.56■□□□□ 0.4
TTC3-223ENST00000492275 TSKUQ8WUA8 353 aa17.56■□□□□ 0.4
TTC3-223ENST00000492275 PGLYRP4Q96LB8 373 aa17.56■□□□□ 0.4
TTC3-223ENST00000492275 TRBV7-3A0A075B6L6 115 aa17.55■□□□□ 0.4
TTC3-223ENST00000492275 DNAH10OSP0CZ25 163 aa17.55■□□□□ 0.4
TTC3-223ENST00000492275 RPL36AP83881 106 aaKnown RBP17.55■□□□□ 0.4
TTC3-223ENST00000492275 C15orf54Q8N8G6 183 aa17.55■□□□□ 0.4
TTC3-223ENST00000492275 NEXN-AS1Q8NBZ9 246 aa17.55■□□□□ 0.4
TTC3-223ENST00000492275 RPL36ALQ969Q0 106 aaKnown RBP17.55■□□□□ 0.4
TTC3-223ENST00000492275 MGPP08493 103 aa17.54■□□□□ 0.4
TTC3-223ENST00000492275 UBE2D3P61077 147 aa17.54■□□□□ 0.4
TTC3-223ENST00000492275 UBE2D2P62837 147 aa17.54■□□□□ 0.4
TTC3-223ENST00000492275 TRAV8-6A0A0B4J262 113 aa17.53■□□□□ 0.4
TTC3-223ENST00000492275 OR10J3Q5JRS4 329 aa17.53■□□□□ 0.4
TTC3-223ENST00000492275 GFRA4Q9GZZ7 299 aa17.53■□□□□ 0.4
TTC3-223ENST00000492275 DPH3P1Q9H4G8 78 aa17.53■□□□□ 0.4
TTC3-223ENST00000492275 SUMO4Q6EEV6 95 aa17.52■□□□□ 0.4
TTC3-223ENST00000492275 FAT2Q9NYQ8 4349 aa17.51■□□□□ 0.39
TTC3-223ENST00000492275 IGHV3-38A0A0C4DH36 116 aa17.51■□□□□ 0.39
TTC3-223ENST00000492275 FAM231BA6NCW3 169 aa17.51■□□□□ 0.39
TTC3-223ENST00000492275 PRSS29PA6NIE9 313 aa17.51■□□□□ 0.39
TTC3-223ENST00000492275 HIGD1CA8MV81 97 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 1314.3 ms