RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 SPANXN1Q5VSR9 72 aa15.99■□□□□ 0.15
CPNE9-204ENST00000491802 LINC00336Q6ZUF6 198 aa15.99■□□□□ 0.15
CPNE9-204ENST00000491802 SMIM7Q9BQ49 75 aa15.99■□□□□ 0.15
CPNE9-204ENST00000491802 TPPP3Q9BW30 176 aa15.99■□□□□ 0.15
CPNE9-204ENST00000491802 NBDYA0A0U1RRE5 68 aa15.98■□□□□ 0.15
CPNE9-204ENST00000491802 XKRY2A2RUG3 117 aa15.98■□□□□ 0.15
CPNE9-204ENST00000491802 IGLC6P0CF74 106 aa15.98■□□□□ 0.15
CPNE9-204ENST00000491802 FER1L6-AS1Q8NA97 138 aa15.98■□□□□ 0.15
CPNE9-204ENST00000491802 NUDT10Q8NFP7 164 aa15.98■□□□□ 0.15
CPNE9-204ENST00000491802 NUDT11Q96G61 164 aa15.98■□□□□ 0.15
CPNE9-204ENST00000491802 RNASE7Q9H1E1 156 aaKnown RBP15.98■□□□□ 0.15
CPNE9-204ENST00000491802 CRYGDP07320 174 aa15.97■□□□□ 0.15
CPNE9-204ENST00000491802 SSTP61278 116 aa15.97■□□□□ 0.15
CPNE9-204ENST00000491802 SH2D6Q7Z4S9 175 aa15.97■□□□□ 0.15
CPNE9-204ENST00000491802 RPP21Q9H633 154 aaKnown RBP15.97■□□□□ 0.15
CPNE9-204ENST00000491802 C14orf178Q8N769 122 aaPredicted RBP15.96■□□□□ 0.15
CPNE9-204ENST00000491802 HECTD4Q9Y4D8 3996 aa15.96■□□□□ 0.15
CPNE9-204ENST00000491802 ZNF727A8MUV8 499 aa15.95■□□□□ 0.14
CPNE9-204ENST00000491802 LY96Q9Y6Y9 160 aa15.95■□□□□ 0.14
CPNE9-204ENST00000491802 TTC32Q5I0X7 151 aa15.94■□□□□ 0.14
CPNE9-204ENST00000491802 GAGE12JA6NER3 117 aa15.93■□□□□ 0.14
CPNE9-204ENST00000491802 RTL8CO15255 209 aa15.93■□□□□ 0.14
CPNE9-204ENST00000491802 GAGE1Q13065 139 aa15.93■□□□□ 0.14
CPNE9-204ENST00000491802 GAGE4Q13068 117 aa15.93■□□□□ 0.14
CPNE9-204ENST00000491802 GAGE5Q13069 117 aa15.93■□□□□ 0.14
CPNE9-204ENST00000491802 GAGE13Q4V321 117 aa15.93■□□□□ 0.14
CPNE9-204ENST00000491802 AP1S3Q96PC3 154 aa15.93■□□□□ 0.14
CPNE9-204ENST00000491802 C9JQL5 133 aa15.92■□□□□ 0.14
CPNE9-204ENST00000491802 SIVA1O15304 175 aa15.92■□□□□ 0.14
CPNE9-204ENST00000491802 SRSF3P84103 164 aaKnown RBP15.92■□□□□ 0.14
CPNE9-204ENST00000491802 PEA15Q15121 130 aa15.92■□□□□ 0.14
CPNE9-204ENST00000491802 LINC01551Q86U37 167 aa15.92■□□□□ 0.14
CPNE9-204ENST00000491802 KRTAP1-5Q9BYS1 174 aa15.92■□□□□ 0.14
CPNE9-204ENST00000491802 A0A1W2PPQ1 181 aa15.91■□□□□ 0.14
CPNE9-204ENST00000491802 LINC00694P0DN24 101 aa15.91■□□□□ 0.14
CPNE9-204ENST00000491802 TIRAPP58753 221 aa15.91■□□□□ 0.14
CPNE9-204ENST00000491802 CACNG7P62955 275 aa15.91■□□□□ 0.14
CPNE9-204ENST00000491802 ZNF56Q15929 161 aa15.91■□□□□ 0.14
CPNE9-204ENST00000491802 SOHLH1Q5JUK2 328 aa15.91■□□□□ 0.14
CPNE9-204ENST00000491802 C1orf134Q5TEV5 83 aa15.91■□□□□ 0.14
CPNE9-204ENST00000491802 LYZL1Q6UWQ5 148 aa15.91■□□□□ 0.14
CPNE9-204ENST00000491802 FAM231DQ6ZW35 169 aa15.91■□□□□ 0.14
CPNE9-204ENST00000491802 Q9UF83 564 aa15.91■□□□□ 0.14
CPNE9-204ENST00000491802 F2Z2F3 143 aa15.9■□□□□ 0.14
CPNE9-204ENST00000491802 GATCO43716 136 aaKnown RBP15.9■□□□□ 0.14
CPNE9-204ENST00000491802 CTRLP40313 264 aa15.9■□□□□ 0.14
CPNE9-204ENST00000491802 ERVFC1-1P60608 527 aa15.9■□□□□ 0.14
CPNE9-204ENST00000491802 WFDC10BQ8IUB3 73 aa15.9■□□□□ 0.14
CPNE9-204ENST00000491802 ATP6V0E2Q8NHE4 81 aa15.9■□□□□ 0.14
CPNE9-204ENST00000491802 BTF3P20290 206 aaKnown RBP15.89■□□□□ 0.13
CPNE9-204ENST00000491802 SMIM17P0DL12 118 aa15.88■□□□□ 0.13
CPNE9-204ENST00000491802 RAB4BP61018 213 aa15.88■□□□□ 0.13
CPNE9-204ENST00000491802 RAB14P61106 215 aa15.88■□□□□ 0.13
CPNE9-204ENST00000491802 FAM74A3Q4VXF1 159 aa15.88■□□□□ 0.13
CPNE9-204ENST00000491802 SMDT1Q9H4I9 107 aa15.88■□□□□ 0.13
CPNE9-204ENST00000491802 MSRB1Q9NZV6 116 aa15.88■□□□□ 0.13
CPNE9-204ENST00000491802 C6orf223Q8N319 242 aa15.87■□□□□ 0.13
CPNE9-204ENST00000491802 GTSF1LQ9H1H1 148 aa15.87■□□□□ 0.13
CPNE9-204ENST00000491802 KIF25-AS1Q9Y6Z4 181 aa15.87■□□□□ 0.13
CPNE9-204ENST00000491802 TRBV10-1A0A0K0K1A3 114 aa15.86■□□□□ 0.13
CPNE9-204ENST00000491802 GTSF1Q8WW33 167 aa15.86■□□□□ 0.13
CPNE9-204ENST00000491802 F5H697 171 aa15.85■□□□□ 0.13
CPNE9-204ENST00000491802 TMEM241Q24JQ0 296 aa15.85■□□□□ 0.13
CPNE9-204ENST00000491802 CT83Q5H943 113 aa15.85■□□□□ 0.13
CPNE9-204ENST00000491802 A0A1B0GVY2 172 aa15.84■□□□□ 0.13
CPNE9-204ENST00000491802 PRSS29PA6NIE9 313 aa15.84■□□□□ 0.13
CPNE9-204ENST00000491802 A8MWL6 223 aa15.84■□□□□ 0.13
CPNE9-204ENST00000491802 MGPP08493 103 aa15.84■□□□□ 0.13
CPNE9-204ENST00000491802 TRGC1P0CF51 173 aa15.84■□□□□ 0.13
CPNE9-204ENST00000491802 NTF3P20783 257 aa15.84■□□□□ 0.13
CPNE9-204ENST00000491802 RPL36AP83881 106 aaKnown RBP15.84■□□□□ 0.13
CPNE9-204ENST00000491802 OR10J3Q5JRS4 329 aa15.84■□□□□ 0.13
CPNE9-204ENST00000491802 LELP1Q5T871 98 aa15.84■□□□□ 0.13
CPNE9-204ENST00000491802 RPL36ALQ969Q0 106 aaKnown RBP15.84■□□□□ 0.13
CPNE9-204ENST00000491802 CNFNQ9BYD5 112 aa15.84■□□□□ 0.13
CPNE9-204ENST00000491802 TRAV8-6A0A0B4J262 113 aa15.83■□□□□ 0.12
CPNE9-204ENST00000491802 LINC00315P59091 139 aa15.83■□□□□ 0.12
CPNE9-204ENST00000491802 RPL23P62829 140 aaKnown RBP15.83■□□□□ 0.12
CPNE9-204ENST00000491802 ADIRFQ15847 76 aa15.83■□□□□ 0.12
CPNE9-204ENST00000491802 WDR73Q6P4I2 378 aa15.83■□□□□ 0.12
CPNE9-204ENST00000491802 ISOC2Q96AB3 205 aa15.83■□□□□ 0.12
CPNE9-204ENST00000491802 OSTCQ9NRP0 149 aa15.83■□□□□ 0.12
CPNE9-204ENST00000491802 NAT8Q9UHE5 227 aa15.83■□□□□ 0.12
CPNE9-204ENST00000491802 DNAH10OSP0CZ25 163 aa15.82■□□□□ 0.12
CPNE9-204ENST00000491802 EVI2AP22794 236 aa15.82■□□□□ 0.12
CPNE9-204ENST00000491802 PKD1P98161 4303 aa15.82■□□□□ 0.12
CPNE9-204ENST00000491802 TRBV7-3A0A075B6L6 115 aa15.81■□□□□ 0.12
CPNE9-204ENST00000491802 K7EP13 123 aa15.81■□□□□ 0.12
CPNE9-204ENST00000491802 TWIST1Q15672 202 aa15.81■□□□□ 0.12
CPNE9-204ENST00000491802 CLLU1Q5K131 121 aa15.81■□□□□ 0.12
CPNE9-204ENST00000491802 C15orf54Q8N8G6 183 aa15.81■□□□□ 0.12
CPNE9-204ENST00000491802 NEXN-AS1Q8NBZ9 246 aa15.81■□□□□ 0.12
CPNE9-204ENST00000491802 OR10G8Q8NGN5 311 aa15.81■□□□□ 0.12
CPNE9-204ENST00000491802 IGHV3-38A0A0C4DH36 116 aa15.8■□□□□ 0.12
CPNE9-204ENST00000491802 UBE2D3P61077 147 aa15.8■□□□□ 0.12
CPNE9-204ENST00000491802 UBE2D2P62837 147 aa15.8■□□□□ 0.12
CPNE9-204ENST00000491802 IFITM2Q01629 132 aa15.8■□□□□ 0.12
CPNE9-204ENST00000491802 PGLYRP4Q96LB8 373 aa15.8■□□□□ 0.12
CPNE9-204ENST00000491802 DPH3P1Q9H4G8 78 aa15.8■□□□□ 0.12
CPNE9-204ENST00000491802 TRAV9-2A0A087WT02 112 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms