RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 BCL2P10415 239 aa10.29□□□□□ -0.76
COL27A1-206ENST00000490831 RPL19P84098 196 aaKnown RBP10.29□□□□□ -0.76
COL27A1-206ENST00000490831 SMIM12Q96EX1 92 aa10.29□□□□□ -0.76
COL27A1-206ENST00000490831 MSRB1Q9NZV6 116 aa10.29□□□□□ -0.76
COL27A1-206ENST00000490831 TRAV8-6A0A0B4J262 113 aa10.28□□□□□ -0.76
COL27A1-206ENST00000490831 M0R381 172 aa10.28□□□□□ -0.76
COL27A1-206ENST00000490831 IGLV2-8P01709 118 aa10.28□□□□□ -0.76
COL27A1-206ENST00000490831 OR5AL1P0C617 328 aa10.28□□□□□ -0.76
COL27A1-206ENST00000490831 TAGLN2P37802 199 aaKnown RBP10.28□□□□□ -0.76
COL27A1-206ENST00000490831 CENPWQ5EE01 88 aa10.28□□□□□ -0.76
COL27A1-206ENST00000490831 C14orf178Q8N769 122 aaPredicted RBP10.28□□□□□ -0.76
COL27A1-206ENST00000490831 Q9UF83 564 aa10.28□□□□□ -0.76
COL27A1-206ENST00000490831 TNFRSF18Q9Y5U5 241 aa10.28□□□□□ -0.76
COL27A1-206ENST00000490831 DNAH5Q8TE73 4624 aa10.27□□□□□ -0.76
COL27A1-206ENST00000490831 GAGE12JA6NER3 117 aa10.27□□□□□ -0.77
COL27A1-206ENST00000490831 C16orf90A8MZG2 172 aa10.27□□□□□ -0.77
COL27A1-206ENST00000490831 GAGE1Q13065 139 aa10.27□□□□□ -0.77
COL27A1-206ENST00000490831 GAGE4Q13068 117 aa10.27□□□□□ -0.77
COL27A1-206ENST00000490831 GAGE5Q13069 117 aa10.27□□□□□ -0.77
COL27A1-206ENST00000490831 GAGE13Q4V321 117 aa10.27□□□□□ -0.77
COL27A1-206ENST00000490831 PRR27Q6MZM9 219 aa10.27□□□□□ -0.77
COL27A1-206ENST00000490831 OR10AG1Q8NH19 301 aa10.27□□□□□ -0.77
COL27A1-206ENST00000490831 VAX2Q9UIW0 290 aa10.27□□□□□ -0.77
COL27A1-206ENST00000490831 A0A087WWL8 130 aa10.26□□□□□ -0.77
COL27A1-206ENST00000490831 C19orf71A6NCJ1 209 aa10.26□□□□□ -0.77
COL27A1-206ENST00000490831 KRTAP10-2P60368 255 aa10.26□□□□□ -0.77
COL27A1-206ENST00000490831 OR10J3Q5JRS4 329 aa10.26□□□□□ -0.77
COL27A1-206ENST00000490831 FAM74A4Q5TZK3 123 aa10.26□□□□□ -0.77
COL27A1-206ENST00000490831 SPATA12Q7Z6I5 190 aa10.26□□□□□ -0.77
COL27A1-206ENST00000490831 TRBV20OR9-2A0A075B6H5 130 aa10.25□□□□□ -0.77
COL27A1-206ENST00000490831 TRBV10-1A0A0K0K1A3 114 aa10.25□□□□□ -0.77
COL27A1-206ENST00000490831 RAB19A4D1S5 217 aa10.25□□□□□ -0.77
COL27A1-206ENST00000490831 IBA57-AS1B1ANH7 110 aa10.25□□□□□ -0.77
COL27A1-206ENST00000490831 GNG4P50150 75 aa10.25□□□□□ -0.77
COL27A1-206ENST00000490831 LYPD6BQ8NI32 183 aa10.25□□□□□ -0.77
COL27A1-206ENST00000490831 HSPG2P98160 4391 aa10.24□□□□□ -0.77
COL27A1-206ENST00000490831 A0A087WWC5 75 aa10.24□□□□□ -0.77
COL27A1-206ENST00000490831 MED9Q9NWA0 146 aa10.24□□□□□ -0.77
COL27A1-206ENST00000490831 CDK2AP2O75956 126 aa10.23□□□□□ -0.77
COL27A1-206ENST00000490831 IGLC6P0CF74 106 aa10.23□□□□□ -0.77
COL27A1-206ENST00000490831 ERVFC1-1P60608 527 aa10.23□□□□□ -0.77
COL27A1-206ENST00000490831 RPS20P60866 119 aaKnown RBP10.23□□□□□ -0.77
COL27A1-206ENST00000490831 RAB4BP61018 213 aa10.23□□□□□ -0.77
COL27A1-206ENST00000490831 BLOC1S1P78537 153 aa10.23□□□□□ -0.77
COL27A1-206ENST00000490831 ALKAL2Q6UX46 152 aa10.23□□□□□ -0.77
COL27A1-206ENST00000490831 OR10G8Q8NGN5 311 aa10.23□□□□□ -0.77
COL27A1-206ENST00000490831 APOBP04114 4563 aaKnown RBP10.22□□□□□ -0.77
COL27A1-206ENST00000490831 A0A1B0GVG6 124 aa10.22□□□□□ -0.77
COL27A1-206ENST00000490831 LAGE3Q14657 143 aa10.22□□□□□ -0.77
COL27A1-206ENST00000490831 SPANXN1Q5VSR9 72 aa10.22□□□□□ -0.77
COL27A1-206ENST00000490831 DAZAP1Q96EP5 407 aaKnown RBP10.22□□□□□ -0.77
COL27A1-206ENST00000490831 BIN3Q9NQY0 253 aa10.22□□□□□ -0.77
COL27A1-206ENST00000490831 A0A087WTM6 91 aa10.21□□□□□ -0.77
COL27A1-206ENST00000490831 UBE2D3P61077 147 aa10.21□□□□□ -0.77
COL27A1-206ENST00000490831 UBE2D2P62837 147 aa10.21□□□□□ -0.77
COL27A1-206ENST00000490831 RPL36AP83881 106 aaKnown RBP10.21□□□□□ -0.77
COL27A1-206ENST00000490831 OR2D3Q8NGH3 330 aa10.21□□□□□ -0.77
COL27A1-206ENST00000490831 RPL36ALQ969Q0 106 aaKnown RBP10.21□□□□□ -0.77
COL27A1-206ENST00000490831 PGPEP1Q9NXJ5 209 aa10.21□□□□□ -0.77
COL27A1-206ENST00000490831 KIF25-AS1Q9Y6Z4 181 aa10.21□□□□□ -0.77
COL27A1-206ENST00000490831 TRBV7-3A0A075B6L6 115 aa10.2□□□□□ -0.78
COL27A1-206ENST00000490831 MUC21A0A0G2JKD1 596 aa10.2□□□□□ -0.78
COL27A1-206ENST00000490831 MUC21A0A140T8X8 626 aa10.2□□□□□ -0.78
COL27A1-206ENST00000490831 TMEM250H0YL14 139 aa10.2□□□□□ -0.78
COL27A1-206ENST00000490831 EREGO14944 169 aa10.2□□□□□ -0.78
COL27A1-206ENST00000490831 IGHV3-30P01768 117 aa10.2□□□□□ -0.78
COL27A1-206ENST00000490831 IGHV3-33P01772 117 aa10.2□□□□□ -0.78
COL27A1-206ENST00000490831 IGHV3-30-3P0DP02 117 aa10.2□□□□□ -0.78
COL27A1-206ENST00000490831 IGHV3-30-5P0DP03 117 aa10.2□□□□□ -0.78
COL27A1-206ENST00000490831 CDPF1Q6NVV7 123 aa10.2□□□□□ -0.78
COL27A1-206ENST00000490831 FER1L6-AS1Q8NA97 138 aa10.2□□□□□ -0.78
COL27A1-206ENST00000490831 PCLOQ9Y6V0 5065 aa10.19□□□□□ -0.78
COL27A1-206ENST00000490831 XKRY2A2RUG3 117 aa10.19□□□□□ -0.78
COL27A1-206ENST00000490831 P01737 135 aa10.19□□□□□ -0.78
COL27A1-206ENST00000490831 GZMBP10144 247 aa10.19□□□□□ -0.78
COL27A1-206ENST00000490831 NKX2-5P52952 324 aaPredicted RBP10.19□□□□□ -0.78
COL27A1-206ENST00000490831 AP1S3Q96PC3 154 aa10.19□□□□□ -0.78
COL27A1-206ENST00000490831 RBFOX3A6NFN3 312 aa10.18□□□□□ -0.78
COL27A1-206ENST00000490831 F2Z2F3 143 aa10.18□□□□□ -0.78
COL27A1-206ENST00000490831 NDUFS6O75380 124 aaKnown RBP10.18□□□□□ -0.78
COL27A1-206ENST00000490831 CACNG7P62955 275 aa10.18□□□□□ -0.78
COL27A1-206ENST00000490831 ZNF56Q15929 161 aa10.18□□□□□ -0.78
COL27A1-206ENST00000490831 Q8N3U1 123 aa10.18□□□□□ -0.78
COL27A1-206ENST00000490831 NEXN-AS1Q8NBZ9 246 aa10.18□□□□□ -0.78
COL27A1-206ENST00000490831 LRCOL1A6NCL2 159 aa10.17□□□□□ -0.78
COL27A1-206ENST00000490831 K7EN84 100 aa10.17□□□□□ -0.78
COL27A1-206ENST00000490831 NIT1Q86X76 327 aa10.17□□□□□ -0.78
COL27A1-206ENST00000490831 NUDT10Q8NFP7 164 aa10.17□□□□□ -0.78
COL27A1-206ENST00000490831 OCC1Q8TAD7 63 aa10.17□□□□□ -0.78
COL27A1-206ENST00000490831 NUDT11Q96G61 164 aa10.17□□□□□ -0.78
COL27A1-206ENST00000490831 SMIM17P0DL12 118 aa10.16□□□□□ -0.78
COL27A1-206ENST00000490831 WDR73Q6P4I2 378 aa10.16□□□□□ -0.78
COL27A1-206ENST00000490831 CHCHD7Q9BUK0 85 aa10.16□□□□□ -0.78
COL27A1-206ENST00000490831 TRAV8-3A0A0A6YYJ7 113 aa10.15□□□□□ -0.78
COL27A1-206ENST00000490831 CTRLP40313 264 aa10.15□□□□□ -0.78
COL27A1-206ENST00000490831 TOR2AQ5JU69 321 aa10.15□□□□□ -0.78
COL27A1-206ENST00000490831 LYZL1Q6UWQ5 148 aa10.15□□□□□ -0.78
COL27A1-206ENST00000490831 DAZ4Q86SG3 579 aaKnown RBP10.15□□□□□ -0.78
COL27A1-206ENST00000490831 TPPP3Q9BW30 176 aa10.15□□□□□ -0.78
COL27A1-206ENST00000490831 CNFNQ9BYD5 112 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms