RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 DPH3P1Q9H4G8 78 aa12.63□□□□□ -0.39
UPK3B-205ENST00000490360 HMGB3O15347 200 aaKnown RBP12.62□□□□□ -0.39
UPK3B-205ENST00000490360 HLA-DQA1P01909 254 aa12.62□□□□□ -0.39
UPK3B-205ENST00000490360 RPL12P30050 165 aaKnown RBP12.62□□□□□ -0.39
UPK3B-205ENST00000490360 RAB2AP61019 212 aa12.62□□□□□ -0.39
UPK3B-205ENST00000490360 UBE2D3P61077 147 aa12.62□□□□□ -0.39
UPK3B-205ENST00000490360 UBE2D2P62837 147 aa12.62□□□□□ -0.39
UPK3B-205ENST00000490360 SDIM1Q6ZPB5 146 aa12.62□□□□□ -0.39
UPK3B-205ENST00000490360 C15orf54Q8N8G6 183 aa12.62□□□□□ -0.39
UPK3B-205ENST00000490360 CLRN3Q8NCR9 226 aa12.62□□□□□ -0.39
UPK3B-205ENST00000490360 SMIM3Q9BZL3 60 aa12.62□□□□□ -0.39
UPK3B-205ENST00000490360 TRBV6-8A0A0A6YYG3 113 aa12.61□□□□□ -0.39
UPK3B-205ENST00000490360 H3BVH4 76 aa12.61□□□□□ -0.39
UPK3B-205ENST00000490360 ANGP03950 147 aaKnown RBP12.61□□□□□ -0.39
UPK3B-205ENST00000490360 STAG3L2P0CL84 134 aa12.61□□□□□ -0.39
UPK3B-205ENST00000490360 STAG3L3P0CL85 134 aa12.61□□□□□ -0.39
UPK3B-205ENST00000490360 CDC34P49427 236 aaPredicted RBP12.61□□□□□ -0.39
UPK3B-205ENST00000490360 SUMO1P63165 101 aaKnown RBP12.61□□□□□ -0.39
UPK3B-205ENST00000490360 SFRP2Q96HF1 295 aa12.61□□□□□ -0.39
UPK3B-205ENST00000490360 B4DEV8 164 aa12.6□□□□□ -0.39
UPK3B-205ENST00000490360 CIRBPQ14011 172 aaKnown RBP12.6□□□□□ -0.39
UPK3B-205ENST00000490360 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.6□□□□□ -0.39
UPK3B-205ENST00000490360 RNF185Q96GF1 192 aa12.6□□□□□ -0.39
UPK3B-205ENST00000490360 TMEM167BQ9NRX6 74 aa12.6□□□□□ -0.39
UPK3B-205ENST00000490360 MPC2O95563 127 aa12.59□□□□□ -0.39
UPK3B-205ENST00000490360 ARMS2P0C7Q2 107 aa12.59□□□□□ -0.39
UPK3B-205ENST00000490360 GCHFRP30047 84 aa12.59□□□□□ -0.39
UPK3B-205ENST00000490360 OR10G8Q8NGN5 311 aa12.59□□□□□ -0.39
UPK3B-205ENST00000490360 PHLDA3Q9Y5J5 127 aa12.59□□□□□ -0.39
UPK3B-205ENST00000490360 TNXBP22105 4242 aa12.58□□□□□ -0.39
UPK3B-205ENST00000490360 A0A087WWL8 130 aa12.58□□□□□ -0.4
UPK3B-205ENST00000490360 MPV17L2Q567V2 206 aa12.58□□□□□ -0.4
UPK3B-205ENST00000490360 PANO1I0J062 215 aa12.57□□□□□ -0.4
UPK3B-205ENST00000490360 H2BFSP57053 126 aa12.57□□□□□ -0.4
UPK3B-205ENST00000490360 RAB24Q969Q5 203 aa12.57□□□□□ -0.4
UPK3B-205ENST00000490360 ARL2-SNX15V9GYD0 113 aa12.57□□□□□ -0.4
UPK3B-205ENST00000490360 KRBOX1C9JBD0 128 aa12.56□□□□□ -0.4
UPK3B-205ENST00000490360 CXorf1O96002 111 aa12.56□□□□□ -0.4
UPK3B-205ENST00000490360 TPT1P13693 172 aaKnown RBP12.56□□□□□ -0.4
UPK3B-205ENST00000490360 CNBPP62633 177 aaKnown RBP12.56□□□□□ -0.4
UPK3B-205ENST00000490360 TMEM97Q5BJF2 176 aa12.56□□□□□ -0.4
UPK3B-205ENST00000490360 ZFP82Q8N141 532 aa12.56□□□□□ -0.4
UPK3B-205ENST00000490360 DPH3Q96FX2 82 aa12.56□□□□□ -0.4
UPK3B-205ENST00000490360 PRR34Q9NV39 138 aa12.56□□□□□ -0.4
UPK3B-205ENST00000490360 A0A1W2PRE2 83 aa12.55□□□□□ -0.4
UPK3B-205ENST00000490360 MBP02144 154 aa12.55□□□□□ -0.4
UPK3B-205ENST00000490360 ENKURQ8TC29 256 aa12.55□□□□□ -0.4
UPK3B-205ENST00000490360 CHCHD5Q9BSY4 110 aa12.55□□□□□ -0.4
UPK3B-205ENST00000490360 WFDC1Q9HC57 220 aa12.55□□□□□ -0.4
UPK3B-205ENST00000490360 PTTG1O95997 202 aa12.54□□□□□ -0.4
UPK3B-205ENST00000490360 RAB4BP61018 213 aa12.54□□□□□ -0.4
UPK3B-205ENST00000490360 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.53□□□□□ -0.4
UPK3B-205ENST00000490360 M0R381 172 aa12.53□□□□□ -0.4
UPK3B-205ENST00000490360 LINC01600Q96MT4 127 aa12.53□□□□□ -0.4
UPK3B-205ENST00000490360 PSMG3Q9BT73 122 aaPredicted RBP12.53□□□□□ -0.4
UPK3B-205ENST00000490360 IGHV3-64A0A075B6Q5 118 aa12.52□□□□□ -0.41
UPK3B-205ENST00000490360 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.41
UPK3B-205ENST00000490360 M0R036 132 aa12.52□□□□□ -0.41
UPK3B-205ENST00000490360 SERF2P84101 59 aa12.52□□□□□ -0.41
UPK3B-205ENST00000490360 FAM162BQ5T6X4 162 aa12.52□□□□□ -0.41
UPK3B-205ENST00000490360 COX8CQ7Z4L0 72 aa12.52□□□□□ -0.41
UPK3B-205ENST00000490360 C7orf33Q8WU49 177 aa12.52□□□□□ -0.41
UPK3B-205ENST00000490360 ZFP30Q9Y2G7 519 aa12.52□□□□□ -0.41
UPK3B-205ENST00000490360 A0A087WYN8 130 aa12.51□□□□□ -0.41
UPK3B-205ENST00000490360 IFNA7P01567 189 aa12.51□□□□□ -0.41
UPK3B-205ENST00000490360 KRTAP26-1Q6PEX3 210 aa12.51□□□□□ -0.41
UPK3B-205ENST00000490360 NKX6-2Q9C056 277 aaPredicted RBP12.51□□□□□ -0.41
UPK3B-205ENST00000490360 AP5S1Q9NUS5 200 aa12.51□□□□□ -0.41
UPK3B-205ENST00000490360 GRIFINA4D1Z8 144 aa12.5□□□□□ -0.41
UPK3B-205ENST00000490360 Q86TA4 180 aa12.5□□□□□ -0.41
UPK3B-205ENST00000490360 HIST1H2BAQ96A08 127 aa12.5□□□□□ -0.41
UPK3B-205ENST00000490360 ACTR3CQ9C0K3 210 aaPredicted RBP12.5□□□□□ -0.41
UPK3B-205ENST00000490360 hDV102S1A0JD36 115 aa12.49□□□□□ -0.41
UPK3B-205ENST00000490360 SH2D1AO60880 128 aa12.49□□□□□ -0.41
UPK3B-205ENST00000490360 CRIP1P50238 77 aa12.49□□□□□ -0.41
UPK3B-205ENST00000490360 PRR27Q6MZM9 219 aa12.49□□□□□ -0.41
UPK3B-205ENST00000490360 LINC00269Q8N2A0 174 aa12.49□□□□□ -0.41
UPK3B-205ENST00000490360 NEXN-AS1Q8NBZ9 246 aa12.49□□□□□ -0.41
UPK3B-205ENST00000490360 INMT-MINDY4F8WBC2 141 aa12.48□□□□□ -0.41
UPK3B-205ENST00000490360 PEX7O00628 323 aa12.48□□□□□ -0.41
UPK3B-205ENST00000490360 RBX1P62877 108 aa12.48□□□□□ -0.41
UPK3B-205ENST00000490360 LINC01559Q495D7 138 aa12.48□□□□□ -0.41
UPK3B-205ENST00000490360 LINC00299Q6ZSB3 139 aa12.48□□□□□ -0.41
UPK3B-205ENST00000490360 SPACA4Q8TDM5 124 aa12.48□□□□□ -0.41
UPK3B-205ENST00000490360 PLAC8Q9NZF1 115 aa12.48□□□□□ -0.41
UPK3B-205ENST00000490360 TRAV8-4A0A0B4J246 113 aa12.47□□□□□ -0.41
UPK3B-205ENST00000490360 SSNA1O43805 119 aa12.47□□□□□ -0.41
UPK3B-205ENST00000490360 P01737 135 aa12.47□□□□□ -0.41
UPK3B-205ENST00000490360 GZMBP10144 247 aa12.47□□□□□ -0.41
UPK3B-205ENST00000490360 ZNF56Q15929 161 aa12.47□□□□□ -0.41
UPK3B-205ENST00000490360 TNFSF18Q9UNG2 199 aa12.47□□□□□ -0.41
UPK3B-205ENST00000490360 TRBV25-1A0A075B6N4 114 aa12.46□□□□□ -0.41
UPK3B-205ENST00000490360 PHOX2AO14813 284 aa12.46□□□□□ -0.41
UPK3B-205ENST00000490360 ATP6V0CP27449 155 aa12.46□□□□□ -0.41
UPK3B-205ENST00000490360 ZNF674Q2M3X9 581 aa12.46□□□□□ -0.41
UPK3B-205ENST00000490360 CLPSL2Q6UWE3 100 aa12.46□□□□□ -0.41
UPK3B-205ENST00000490360 VAX2Q9UIW0 290 aa12.46□□□□□ -0.41
UPK3B-205ENST00000490360 FMC1Q96HJ9 113 aa12.45□□□□□ -0.42
UPK3B-205ENST00000490360 A6NHS1 94 aa12.44□□□□□ -0.42
UPK3B-205ENST00000490360 REG3AQ06141 175 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms