RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 NOP10Q9NPE3 64 aaKnown RBP9.54□□□□□ -0.88
HLA-DOA-205ENST00000490305 MRPL16Q9NX20 251 aaKnown RBP9.54□□□□□ -0.88
HLA-DOA-205ENST00000490305 LAMTOR2Q9Y2Q5 125 aa9.54□□□□□ -0.88
HLA-DOA-205ENST00000490305 U3KQK5 164 aa9.54□□□□□ -0.88
HLA-DOA-205ENST00000490305 TRGV1A0A0A0MS02 117 aa9.53□□□□□ -0.88
HLA-DOA-205ENST00000490305 D6R8Y8 96 aa9.53□□□□□ -0.88
HLA-DOA-205ENST00000490305 RHODO00212 210 aa9.53□□□□□ -0.88
HLA-DOA-205ENST00000490305 MGPP08493 103 aa9.53□□□□□ -0.88
HLA-DOA-205ENST00000490305 NDUFA6P56556 154 aa9.53□□□□□ -0.88
HLA-DOA-205ENST00000490305 Q0VG73 95 aa9.53□□□□□ -0.88
HLA-DOA-205ENST00000490305 POM121L12Q8N7R1 296 aa9.53□□□□□ -0.88
HLA-DOA-205ENST00000490305 PRELID3AQ96N28 172 aa9.53□□□□□ -0.88
HLA-DOA-205ENST00000490305 A0A087WWL8 130 aa9.52□□□□□ -0.89
HLA-DOA-205ENST00000490305 K7EIL1 84 aa9.52□□□□□ -0.89
HLA-DOA-205ENST00000490305 RS1O15537 224 aa9.52□□□□□ -0.89
HLA-DOA-205ENST00000490305 CIDEAO60543 219 aa9.52□□□□□ -0.89
HLA-DOA-205ENST00000490305 PPP1R17O96001 155 aa9.52□□□□□ -0.89
HLA-DOA-205ENST00000490305 CRYGDP07320 174 aa9.52□□□□□ -0.89
HLA-DOA-205ENST00000490305 JPT2Q9H910 190 aa9.52□□□□□ -0.89
HLA-DOA-205ENST00000490305 F5H697 171 aa9.51□□□□□ -0.89
HLA-DOA-205ENST00000490305 LINC00315P59091 139 aa9.51□□□□□ -0.89
HLA-DOA-205ENST00000490305 FAM74A4Q5TZK3 123 aa9.51□□□□□ -0.89
HLA-DOA-205ENST00000490305 PKD1L1Q8TDX9 2849 aa9.51□□□□□ -0.89
HLA-DOA-205ENST00000490305 TRAV4A0A0B4J268 109 aa9.5□□□□□ -0.89
HLA-DOA-205ENST00000490305 LYRM9A8MSI8 78 aa9.5□□□□□ -0.89
HLA-DOA-205ENST00000490305 ZNF56Q15929 161 aa9.5□□□□□ -0.89
HLA-DOA-205ENST00000490305 DEFB121Q5J5C9 76 aa9.5□□□□□ -0.89
HLA-DOA-205ENST00000490305 COA6Q5JTJ3 125 aaKnown RBP9.5□□□□□ -0.89
HLA-DOA-205ENST00000490305 CFAP126Q5VTH2 177 aa9.5□□□□□ -0.89
HLA-DOA-205ENST00000490305 ZFP2Q6ZN57 461 aa9.5□□□□□ -0.89
HLA-DOA-205ENST00000490305 Q6ZTI0 123 aa9.5□□□□□ -0.89
HLA-DOA-205ENST00000490305 BAGE3Q86Y29 109 aa9.5□□□□□ -0.89
HLA-DOA-205ENST00000490305 OR4C5Q8NGB2 326 aa9.5□□□□□ -0.89
HLA-DOA-205ENST00000490305 C18orf32Q8TCD1 76 aa9.5□□□□□ -0.89
HLA-DOA-205ENST00000490305 SAMD10Q9BYL1 202 aa9.5□□□□□ -0.89
HLA-DOA-205ENST00000490305 TRGV2A0A075B6R0 118 aa9.49□□□□□ -0.89
HLA-DOA-205ENST00000490305 IGHV4-28A0A0C4DH34 117 aa9.49□□□□□ -0.89
HLA-DOA-205ENST00000490305 SMKR1H3BMG3 65 aa9.49□□□□□ -0.89
HLA-DOA-205ENST00000490305 H7C1H1 209 aa9.49□□□□□ -0.89
HLA-DOA-205ENST00000490305 NCR2O95944 276 aa9.49□□□□□ -0.89
HLA-DOA-205ENST00000490305 PRB2P02812 416 aaPredicted RBP9.49□□□□□ -0.89
HLA-DOA-205ENST00000490305 EMP1P54849 157 aa9.49□□□□□ -0.89
HLA-DOA-205ENST00000490305 Q8NAQ8 132 aa9.49□□□□□ -0.89
HLA-DOA-205ENST00000490305 NACAE9PAV3 2078 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 TRAV26-2A0A0B4J265 109 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 TEX48A0A1B0GUV7 120 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 GAGE12BA1L429 117 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 GAGE7O76087 117 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 TNFRSF6BO95407 300 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 GAGE12FP0CL80 117 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 GAGE12GP0CL81 117 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 GAGE12IP0CL82 117 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 SUMO4Q6EEV6 95 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 UFSP1Q6NVU6 142 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 C18orf15Q96N68 181 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 MAP1LC3AQ9H492 121 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 EDA2RQ9HAV5 297 aa9.48□□□□□ -0.89
HLA-DOA-205ENST00000490305 C5orf52A6NGY3 159 aa9.47□□□□□ -0.89
HLA-DOA-205ENST00000490305 PRSS47A8MTI9 375 aa9.47□□□□□ -0.89
HLA-DOA-205ENST00000490305 NPYP01303 97 aa9.47□□□□□ -0.89
HLA-DOA-205ENST00000490305 SNRPEP62304 92 aaKnown RBP9.47□□□□□ -0.89
HLA-DOA-205ENST00000490305 IQCJQ1A5X6 159 aa9.47□□□□□ -0.89
HLA-DOA-205ENST00000490305 LINC00612Q8N6U2 182 aa9.47□□□□□ -0.89
HLA-DOA-205ENST00000490305 NRACQ8N912 160 aa9.47□□□□□ -0.89
HLA-DOA-205ENST00000490305 SPATA25Q9BR10 227 aa9.47□□□□□ -0.89
HLA-DOA-205ENST00000490305 C20orf78Q9BR46 151 aa9.47□□□□□ -0.89
HLA-DOA-205ENST00000490305 SPART-AS1P0CW21 52 aa9.46□□□□□ -0.9
HLA-DOA-205ENST00000490305 HOXA5P20719 270 aa9.46□□□□□ -0.9
HLA-DOA-205ENST00000490305 FAM222AQ5U5X8 452 aa9.46□□□□□ -0.9
HLA-DOA-205ENST00000490305 SBSPONQ8IVN8 264 aa9.46□□□□□ -0.9
HLA-DOA-205ENST00000490305 PRSS3P2Q8NHM4 247 aa9.46□□□□□ -0.9
HLA-DOA-205ENST00000490305 DKK2Q9UBU2 259 aa9.46□□□□□ -0.9
HLA-DOA-205ENST00000490305 IGHV3-73A0A0B4J1V6 119 aa9.45□□□□□ -0.9
HLA-DOA-205ENST00000490305 M0QY20 66 aa9.45□□□□□ -0.9
HLA-DOA-205ENST00000490305 IGHV3-53P01767 116 aa9.45□□□□□ -0.9
HLA-DOA-205ENST00000490305 ESDP10768 282 aa9.45□□□□□ -0.9
HLA-DOA-205ENST00000490305 GATA1P15976 413 aaPredicted RBP9.45□□□□□ -0.9
HLA-DOA-205ENST00000490305 FA2HQ7L5A8 372 aa9.45□□□□□ -0.9
HLA-DOA-205ENST00000490305 NIT1Q86X76 327 aa9.45□□□□□ -0.9
HLA-DOA-205ENST00000490305 CHCHD1Q96BP2 118 aaKnown RBP9.45□□□□□ -0.9
HLA-DOA-205ENST00000490305 RETNQ9HD89 108 aa9.45□□□□□ -0.9
HLA-DOA-205ENST00000490305 NXT2Q9NPJ8 142 aaKnown RBP9.45□□□□□ -0.9
HLA-DOA-205ENST00000490305 TRBV6-5A0A0K0K1A5 114 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 LOC389332A0A1B0GUA5 103 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 SERF1AO75920 110 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 GAS8-AS1O95177 125 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 LINC00614P0C842 121 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 DEFB130BP0DP73 79 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 DEFB130AP0DP74 79 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 PMCHP20382 165 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 MRAPQ8TCY5 172 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 ZNF479Q96JC4 524 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 DNAJC30Q96LL9 226 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 TM2D3Q9BRN9 247 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 C11orf68Q9H3H3 251 aaKnown RBP9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 ST20Q9HBF5 79 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 NIT2Q9NQR4 276 aa9.44□□□□□ -0.9
HLA-DOA-205ENST00000490305 DEFB4AO15263 64 aa9.43□□□□□ -0.9
HLA-DOA-205ENST00000490305 S100A2P29034 98 aa9.43□□□□□ -0.9
HLA-DOA-205ENST00000490305 DAD1P61803 113 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms