RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 GAGE4Q13068 117 aa13.36□□□□□ -0.27
SMC4-222ENST00000490207 GAGE5Q13069 117 aa13.36□□□□□ -0.27
SMC4-222ENST00000490207 GAGE13Q4V321 117 aa13.36□□□□□ -0.27
SMC4-222ENST00000490207 LINC01556Q5JQF7 62 aa13.36□□□□□ -0.27
SMC4-222ENST00000490207 PRR27Q6MZM9 219 aa13.36□□□□□ -0.27
SMC4-222ENST00000490207 C14orf178Q8N769 122 aaPredicted RBP13.36□□□□□ -0.27
SMC4-222ENST00000490207 CXCL1P09341 107 aa13.35□□□□□ -0.27
SMC4-222ENST00000490207 RPL35P42766 123 aaKnown RBP13.35□□□□□ -0.27
SMC4-222ENST00000490207 SLC51BQ86UW2 128 aa13.35□□□□□ -0.27
SMC4-222ENST00000490207 C11orf52Q96A22 123 aa13.35□□□□□ -0.27
SMC4-222ENST00000490207 SFRP2Q96HF1 295 aa13.35□□□□□ -0.27
SMC4-222ENST00000490207 APOBP04114 4563 aaKnown RBP13.34□□□□□ -0.27
SMC4-222ENST00000490207 A0A087WWL8 130 aa13.34□□□□□ -0.27
SMC4-222ENST00000490207 EREGO14944 169 aa13.34□□□□□ -0.27
SMC4-222ENST00000490207 DERL1Q9BUN8 251 aa13.34□□□□□ -0.27
SMC4-222ENST00000490207 AKAP14Q86UN6 197 aa13.33□□□□□ -0.28
SMC4-222ENST00000490207 hCG_2014768A0A024R1R8 64 aa13.32□□□□□ -0.28
SMC4-222ENST00000490207 CDK2AP2O75956 126 aa13.32□□□□□ -0.28
SMC4-222ENST00000490207 IFNA1P01562 189 aa13.32□□□□□ -0.28
SMC4-222ENST00000490207 Q9UF83 564 aa13.32□□□□□ -0.28
SMC4-222ENST00000490207 IGHV3-30P01768 117 aa13.31□□□□□ -0.28
SMC4-222ENST00000490207 IGHV3-33P01772 117 aa13.31□□□□□ -0.28
SMC4-222ENST00000490207 IGHV3-30-3P0DP02 117 aa13.31□□□□□ -0.28
SMC4-222ENST00000490207 IGHV3-30-5P0DP03 117 aa13.31□□□□□ -0.28
SMC4-222ENST00000490207 CENPWQ5EE01 88 aa13.31□□□□□ -0.28
SMC4-222ENST00000490207 OR10AG1Q8NH19 301 aa13.31□□□□□ -0.28
SMC4-222ENST00000490207 A0A087WTM6 91 aa13.3□□□□□ -0.28
SMC4-222ENST00000490207 SNAI2O43623 268 aa13.3□□□□□ -0.28
SMC4-222ENST00000490207 MEF2BQ02080 365 aaPredicted RBP13.3□□□□□ -0.28
SMC4-222ENST00000490207 IBA57-AS1B1ANH7 110 aa13.29□□□□□ -0.28
SMC4-222ENST00000490207 C9orf62Q8N4C0 152 aa13.29□□□□□ -0.28
SMC4-222ENST00000490207 PDE6DO43924 150 aa13.28□□□□□ -0.28
SMC4-222ENST00000490207 BCL2P10415 239 aa13.28□□□□□ -0.28
SMC4-222ENST00000490207 KRTAP17-1Q9BYP8 105 aa13.28□□□□□ -0.28
SMC4-222ENST00000490207 Q9HAA7 133 aa13.28□□□□□ -0.28
SMC4-222ENST00000490207 PSCAO43653 123 aa13.27□□□□□ -0.29
SMC4-222ENST00000490207 OR5AL1P0C617 328 aa13.27□□□□□ -0.29
SMC4-222ENST00000490207 GNG4P50150 75 aa13.27□□□□□ -0.29
SMC4-222ENST00000490207 SPANXN1Q5VSR9 72 aa13.27□□□□□ -0.29
SMC4-222ENST00000490207 CDPF1Q6NVV7 123 aa13.27□□□□□ -0.29
SMC4-222ENST00000490207 SSBP4Q9BWG4 385 aaPredicted RBP13.27□□□□□ -0.29
SMC4-222ENST00000490207 PGPEP1Q9NXJ5 209 aa13.27□□□□□ -0.29
SMC4-222ENST00000490207 A0A087WWC5 75 aa13.26□□□□□ -0.29
SMC4-222ENST00000490207 MUC21A0A0G2JKD1 596 aa13.26□□□□□ -0.29
SMC4-222ENST00000490207 TRBV10-1A0A0K0K1A3 114 aa13.26□□□□□ -0.29
SMC4-222ENST00000490207 MUC21A0A140T8X8 626 aa13.26□□□□□ -0.29
SMC4-222ENST00000490207 RAB19A4D1S5 217 aa13.26□□□□□ -0.29
SMC4-222ENST00000490207 IGLV2-8P01709 118 aa13.26□□□□□ -0.29
SMC4-222ENST00000490207 FUSP35637 526 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMC4-222ENST00000490207 ZNF56Q15929 161 aa13.26□□□□□ -0.29
SMC4-222ENST00000490207 Q8N3U1 123 aa13.26□□□□□ -0.29
SMC4-222ENST00000490207 SMIM12Q96EX1 92 aa13.26□□□□□ -0.29
SMC4-222ENST00000490207 MED9Q9NWA0 146 aa13.26□□□□□ -0.29
SMC4-222ENST00000490207 RPL36AP83881 106 aaKnown RBP13.25□□□□□ -0.29
SMC4-222ENST00000490207 LAGE3Q14657 143 aa13.25□□□□□ -0.29
SMC4-222ENST00000490207 RPL36ALQ969Q0 106 aaKnown RBP13.25□□□□□ -0.29
SMC4-222ENST00000490207 DAZAP1Q96EP5 407 aaKnown RBP13.25□□□□□ -0.29
SMC4-222ENST00000490207 VAX2Q9UIW0 290 aa13.25□□□□□ -0.29
SMC4-222ENST00000490207 TAGLN2P37802 199 aaKnown RBP13.24□□□□□ -0.29
SMC4-222ENST00000490207 RAB4BP61018 213 aa13.24□□□□□ -0.29
SMC4-222ENST00000490207 RPS20P60866 119 aaKnown RBP13.23□□□□□ -0.29
SMC4-222ENST00000490207 UBE2D3P61077 147 aa13.23□□□□□ -0.29
SMC4-222ENST00000490207 SSTP61278 116 aa13.23□□□□□ -0.29
SMC4-222ENST00000490207 UBE2D2P62837 147 aa13.23□□□□□ -0.29
SMC4-222ENST00000490207 MAPKAPK5-AS1Q8N8E1 139 aa13.23□□□□□ -0.29
SMC4-222ENST00000490207 OR2D3Q8NGH3 330 aa13.23□□□□□ -0.29
SMC4-222ENST00000490207 AP1S3Q96PC3 154 aa13.23□□□□□ -0.29
SMC4-222ENST00000490207 TRBV7-3A0A075B6L6 115 aa13.22□□□□□ -0.29
SMC4-222ENST00000490207 C19orf71A6NCJ1 209 aa13.22□□□□□ -0.29
SMC4-222ENST00000490207 GZMBP10144 247 aa13.22□□□□□ -0.29
SMC4-222ENST00000490207 OR10G8Q8NGN5 311 aa13.22□□□□□ -0.29
SMC4-222ENST00000490207 TRBV20OR9-2A0A075B6H5 130 aa13.21□□□□□ -0.29
SMC4-222ENST00000490207 P01737 135 aa13.21□□□□□ -0.29
SMC4-222ENST00000490207 IGLC6P0CF74 106 aa13.21□□□□□ -0.29
SMC4-222ENST00000490207 SMIM17P0DL12 118 aa13.21□□□□□ -0.29
SMC4-222ENST00000490207 ALKAL2Q6UX46 152 aa13.21□□□□□ -0.29
SMC4-222ENST00000490207 DAZ4Q86SG3 579 aaKnown RBP13.21□□□□□ -0.29
SMC4-222ENST00000490207 FER1L6-AS1Q8NA97 138 aa13.21□□□□□ -0.29
SMC4-222ENST00000490207 NEXN-AS1Q8NBZ9 246 aa13.21□□□□□ -0.29
SMC4-222ENST00000490207 TPPP3Q9BW30 176 aa13.21□□□□□ -0.29
SMC4-222ENST00000490207 BIN3Q9NQY0 253 aa13.21□□□□□ -0.29
SMC4-222ENST00000490207 DAZ3Q9NR90 486 aaKnown RBP13.21□□□□□ -0.29
SMC4-222ENST00000490207 URGCP-MRPS24S4R325 110 aa13.21□□□□□ -0.29
SMC4-222ENST00000490207 LRCOL1A6NCL2 159 aa13.2□□□□□ -0.3
SMC4-222ENST00000490207 RBFOX3A6NFN3 312 aa13.2□□□□□ -0.3
SMC4-222ENST00000490207 TOR2AQ5JU69 321 aa13.2□□□□□ -0.3
SMC4-222ENST00000490207 PCLOQ9Y6V0 5065 aa13.19□□□□□ -0.3
SMC4-222ENST00000490207 XKRY2A2RUG3 117 aa13.19□□□□□ -0.3
SMC4-222ENST00000490207 F5H697 171 aa13.19□□□□□ -0.3
SMC4-222ENST00000490207 NIT1Q86X76 327 aa13.19□□□□□ -0.3
SMC4-222ENST00000490207 TM2D2Q9BX73 214 aa13.19□□□□□ -0.3
SMC4-222ENST00000490207 TRAV8-3A0A0A6YYJ7 113 aa13.18□□□□□ -0.3
SMC4-222ENST00000490207 BLOC1S1P78537 153 aa13.18□□□□□ -0.3
SMC4-222ENST00000490207 KRTAP4-5Q9BYR2 181 aa13.18□□□□□ -0.3
SMC4-222ENST00000490207 CACNG7P62955 275 aa13.17□□□□□ -0.3
SMC4-222ENST00000490207 KIF25-AS1Q9Y6Z4 181 aa13.17□□□□□ -0.3
SMC4-222ENST00000490207 MGPP08493 103 aa13.16□□□□□ -0.3
SMC4-222ENST00000490207 KCNIP4Q6PIL6 250 aa13.16□□□□□ -0.3
SMC4-222ENST00000490207 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.16□□□□□ -0.3
SMC4-222ENST00000490207 CHCHD7Q9BUK0 85 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms