RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 HIGD2BQ4VC39 106 aa6.89□□□□□ -1.31
LSAMP-205ENST00000490035 NDUFA1O15239 70 aa6.89□□□□□ -1.31
LSAMP-205ENST00000490035 A4D1N5 150 aa6.88□□□□□ -1.31
LSAMP-205ENST00000490035 ANKHD1Q8IWZ3 2542 aaKnown RBP6.88□□□□□ -1.31
LSAMP-205ENST00000490035 NXPH4O95158 308 aa6.88□□□□□ -1.31
LSAMP-205ENST00000490035 VSIG2Q96IQ7 327 aa6.88□□□□□ -1.31
LSAMP-205ENST00000490035 TMEM263Q8WUH6 116 aaKnown RBP6.88□□□□□ -1.31
LSAMP-205ENST00000490035 CAMK2N2Q96S95 79 aa6.88□□□□□ -1.31
LSAMP-205ENST00000490035 IGHV3-38A0A0C4DH36 116 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 MYCNOSP40205 109 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 DEFB112Q30KQ8 113 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 NPSP0C0P6 89 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 SPATA12Q7Z6I5 190 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 Q8N1Y9 231 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 NTN5Q8WTR8 489 aaPredicted RBP6.87□□□□□ -1.31
LSAMP-205ENST00000490035 GNRH2O43555 120 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 IGKV1-17P01599 117 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 CTSGP08311 255 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 HHLA3Q9XRX5 114 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 FAM208BQ5VWN6 2430 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 FAM167A-AS1Q96KT0 104 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 TRAV4A0A0B4J268 109 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 PRR30Q53SZ7 412 aaPredicted RBP6.87□□□□□ -1.31
LSAMP-205ENST00000490035 MDFICQ9P1T7 246 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 CTSZQ9UBR2 303 aa6.87□□□□□ -1.31
LSAMP-205ENST00000490035 GYPEP15421 78 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 LINC00574Q9H8X3 128 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 SMIM9A6NGZ8 99 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 NREPQ16612 68 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 AGRNO00468 2067 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 COL5A1P20908 1838 aaPredicted RBP6.86□□□□□ -1.31
LSAMP-205ENST00000490035 Q8N9W7 124 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 A0A1B0GX51 115 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 IGLL5B9A064 214 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 HIST2H2BCQ6DN03 193 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 KLK5Q9Y337 293 aaPredicted RBP6.86□□□□□ -1.31
LSAMP-205ENST00000490035 BAALCQ8WXS3 180 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 EXPH5Q8NEV8 1989 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 ADAMTS20P59510 1910 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 TRBV10-2A0A0K0K1G8 114 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 C2orf70A6NJV1 201 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 KIR2DL5BQ8NHK3 375 aa6.86□□□□□ -1.31
LSAMP-205ENST00000490035 TIRAPP58753 221 aa6.85□□□□□ -1.31
LSAMP-205ENST00000490035 C4orf48Q5BLP8 95 aa6.85□□□□□ -1.31
LSAMP-205ENST00000490035 NDUFS5O43920 106 aa6.85□□□□□ -1.31
LSAMP-205ENST00000490035 IGHV4-59P01825 116 aa6.85□□□□□ -1.31
LSAMP-205ENST00000490035 PSMB8P28062 276 aa6.85□□□□□ -1.31
LSAMP-205ENST00000490035 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
LSAMP-205ENST00000490035 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
LSAMP-205ENST00000490035 MAJINQ3KP22 176 aa6.85□□□□□ -1.31
LSAMP-205ENST00000490035 K7ERJ3 54 aa6.85□□□□□ -1.31
LSAMP-205ENST00000490035 DIRC1Q969H9 104 aa6.85□□□□□ -1.31
LSAMP-205ENST00000490035 FGF23Q9GZV9 251 aaPredicted RBP6.85□□□□□ -1.31
LSAMP-205ENST00000490035 TET2Q6N021 2002 aaPredicted RBP6.84□□□□□ -1.31
LSAMP-205ENST00000490035 LYPD6Q86Y78 171 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 C10orf105Q8TEF2 133 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 DEFB104AQ8WTQ1 72 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 ATP5EP2Q5VTU8 51 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 CSPG4Q6UVK1 2322 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 TINCRA0A1B0GVN0 87 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 IGLV1-47P01700 117 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 MUC6Q6W4X9 2439 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 PCP2Q8IVA1 136 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 AJUBAQ96IF1 538 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 COL4A4P53420 1690 aaPredicted RBP6.84□□□□□ -1.31
LSAMP-205ENST00000490035 CHKB-CPT1BH3BT56 60 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 J3KT08 172 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 LGALS9O00182 355 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 DIAPH2-AS1Q14236 149 aa6.84□□□□□ -1.31
LSAMP-205ENST00000490035 TECTAO75443 2155 aa6.84□□□□□ -1.32
LSAMP-205ENST00000490035 RPL18AQ02543 176 aaKnown RBP6.84□□□□□ -1.32
LSAMP-205ENST00000490035 C17orf77Q96MU5 243 aa6.84□□□□□ -1.32
LSAMP-205ENST00000490035 PTPRSQ13332 1948 aa6.83□□□□□ -1.32
LSAMP-205ENST00000490035 IGKV1OR2-108A0A075B7D4 117 aa6.83□□□□□ -1.32
LSAMP-205ENST00000490035 MUSTN1Q8IVN3 82 aa6.83□□□□□ -1.32
LSAMP-205ENST00000490035 MRAPQ8TCY5 172 aa6.83□□□□□ -1.32
LSAMP-205ENST00000490035 TEX22C9J3V5 150 aa6.82□□□□□ -1.32
LSAMP-205ENST00000490035 RPL39LQ96EH5 51 aaKnown RBP6.82□□□□□ -1.32
LSAMP-205ENST00000490035 RAI1Q7Z5J4 1906 aaPredicted RBP6.82□□□□□ -1.32
LSAMP-205ENST00000490035 A0A0J9YXY3 114 aa6.82□□□□□ -1.32
LSAMP-205ENST00000490035 WIPF3A6NGB9 483 aa6.82□□□□□ -1.32
LSAMP-205ENST00000490035 AMTNQ6UX39 209 aa6.82□□□□□ -1.32
LSAMP-205ENST00000490035 SELENOKQ9Y6D0 94 aa6.82□□□□□ -1.32
LSAMP-205ENST00000490035 ODF1Q14990 250 aa6.82□□□□□ -1.32
LSAMP-205ENST00000490035 MUC7Q8TAX7 377 aa6.82□□□□□ -1.32
LSAMP-205ENST00000490035 LINC00643Q86TS7 51 aa6.82□□□□□ -1.32
LSAMP-205ENST00000490035 PRO0255Q9UI72 69 aa6.82□□□□□ -1.32
LSAMP-205ENST00000490035 C19orf71A6NCJ1 209 aa6.82□□□□□ -1.32
LSAMP-205ENST00000490035 LRRC75A-AS1Q8N1F1 130 aa6.82□□□□□ -1.32
LSAMP-205ENST00000490035 GPR179Q6PRD1 2367 aa6.81□□□□□ -1.32
LSAMP-205ENST00000490035 IGLV2-23P01705 113 aa6.81□□□□□ -1.32
LSAMP-205ENST00000490035 SEC61GP60059 68 aa6.81□□□□□ -1.32
LSAMP-205ENST00000490035 C5orf38Q86SI9 138 aa6.81□□□□□ -1.32
LSAMP-205ENST00000490035 ATP5EP56381 51 aaPredicted RBP6.81□□□□□ -1.32
LSAMP-205ENST00000490035 GTSF1Q8WW33 167 aa6.81□□□□□ -1.32
LSAMP-205ENST00000490035 ZNF524Q96C55 264 aa6.81□□□□□ -1.32
LSAMP-205ENST00000490035 FOXI1Q12951 378 aa6.81□□□□□ -1.32
LSAMP-205ENST00000490035 HIVEP2P31629 2446 aa6.81□□□□□ -1.32
LSAMP-205ENST00000490035 MIAQ16674 131 aa6.81□□□□□ -1.32
LSAMP-205ENST00000490035 PRB4P10163 310 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms