RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ORM1P02763 201 aa7.52□□□□□ -1.21
SCAMP4-208ENST00000489554 FABP4P15090 132 aa7.52□□□□□ -1.21
SCAMP4-208ENST00000489554 RAB4AP20338 218 aa7.52□□□□□ -1.21
SCAMP4-208ENST00000489554 CAMPP49913 170 aa7.52□□□□□ -1.21
SCAMP4-208ENST00000489554 EMP1P54849 157 aa7.52□□□□□ -1.21
SCAMP4-208ENST00000489554 MUC21Q5SSG8 566 aa7.52□□□□□ -1.21
SCAMP4-208ENST00000489554 OR10D4PQ8NGN7 298 aa7.52□□□□□ -1.21
SCAMP4-208ENST00000489554 GTSF1Q8WW33 167 aa7.52□□□□□ -1.21
SCAMP4-208ENST00000489554 IGHV1OR15-1A0A075B7D0 117 aa7.51□□□□□ -1.21
SCAMP4-208ENST00000489554 PLAC8L1A1L4L8 177 aa7.51□□□□□ -1.21
SCAMP4-208ENST00000489554 AZU1P20160 251 aa7.51□□□□□ -1.21
SCAMP4-208ENST00000489554 FAM222AQ5U5X8 452 aa7.51□□□□□ -1.21
SCAMP4-208ENST00000489554 SMIM15Q7Z3B0 74 aa7.51□□□□□ -1.21
SCAMP4-208ENST00000489554 TMEM256Q8N2U0 113 aa7.51□□□□□ -1.21
SCAMP4-208ENST00000489554 HIST1H2BLQ99880 126 aa7.51□□□□□ -1.21
SCAMP4-208ENST00000489554 DKK2Q9UBU2 259 aa7.51□□□□□ -1.21
SCAMP4-208ENST00000489554 TMSB15BA0A087X1C1 80 aa7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 IGHV3-16A0A0C4DH30 117 aa7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 GNRH2O43555 120 aa7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 IGLC6P0CF74 106 aa7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 GZMBP10144 247 aa7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 RNASE3P12724 160 aaKnown RBP7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 PMCHP20382 165 aa7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 SRIP30626 198 aa7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 ZNF493Q6ZR52 646 aa7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 FER1L6-AS1Q8NA97 138 aa7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 C11orf72Q8NBR9 251 aa7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 NDUFAF3Q9BU61 184 aa7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 SAMD10Q9BYL1 202 aa7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 NAGKQ9UJ70 344 aa7.5□□□□□ -1.21
SCAMP4-208ENST00000489554 EPPK1P58107 5090 aaKnown RBP7.49□□□□□ -1.21
SCAMP4-208ENST00000489554 GRIFINA4D1Z8 144 aa7.49□□□□□ -1.21
SCAMP4-208ENST00000489554 CTRLP40313 264 aa7.49□□□□□ -1.21
SCAMP4-208ENST00000489554 CACNG7P62955 275 aa7.49□□□□□ -1.21
SCAMP4-208ENST00000489554 PDZD11Q5EBL8 140 aa7.49□□□□□ -1.21
SCAMP4-208ENST00000489554 RNASE8Q8TDE3 154 aaKnown RBP7.49□□□□□ -1.21
SCAMP4-208ENST00000489554 LINC01587Q99440 93 aa7.49□□□□□ -1.21
SCAMP4-208ENST00000489554 MDFICQ9P1T7 246 aa7.49□□□□□ -1.21
SCAMP4-208ENST00000489554 MUC4Q99102 2169 aa7.49□□□□□ -1.21
SCAMP4-208ENST00000489554 KMT2AQ03164 3969 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 LYRM9A8MSI8 78 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 PPBPP02775 128 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 MED14OSP0DP75 135 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 DAD1P61803 113 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 SLAQ13239 276 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 JOSD1Q15040 202 aaPredicted RBP7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 IQCJQ1A5X6 159 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 LYZL1Q6UWQ5 148 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 FAM159AQ6UWV7 190 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 CHCHD1Q96BP2 118 aaKnown RBP7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 KCNS1Q96KK3 526 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 C9orf85Q96MD7 179 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 ALKBH7Q9BT30 221 aaPredicted RBP7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 TPPP3Q9BW30 176 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 SSBP4Q9BWG4 385 aaPredicted RBP7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 CNFNQ9BYD5 112 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 SCRT2Q9NQ03 307 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 NIT2Q9NQR4 276 aa7.48□□□□□ -1.21
SCAMP4-208ENST00000489554 IFITM10A6NMD0 228 aa7.47□□□□□ -1.21
SCAMP4-208ENST00000489554 SNAI2O43623 268 aa7.47□□□□□ -1.21
SCAMP4-208ENST00000489554 ARMS2P0C7Q2 107 aa7.47□□□□□ -1.21
SCAMP4-208ENST00000489554 P0DMU3 169 aa7.47□□□□□ -1.21
SCAMP4-208ENST00000489554 FAM231AP0DMU4 169 aa7.47□□□□□ -1.21
SCAMP4-208ENST00000489554 FAM231CP0DMU5 169 aa7.47□□□□□ -1.21
SCAMP4-208ENST00000489554 TMEM263Q8WUH6 116 aaKnown RBP7.47□□□□□ -1.21
SCAMP4-208ENST00000489554 LAMTOR2Q9Y2Q5 125 aa7.47□□□□□ -1.21
SCAMP4-208ENST00000489554 TRGV11A0A075B6L2 103 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 CBY3A6NI87 242 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 HSBP1O75506 76 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 SERF1AO75920 110 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 OR5AL1P0C617 328 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 HTN1P15515 57 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 TWIST1Q15672 202 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 KIAA1644Q3SXP7 199 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 C18orf32Q8TCD1 76 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 C16orf74Q96GX8 76 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 TMEM191AQ9H0A3 160 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 GSN-AS1Q9NRJ2 163 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 BIRC6Q9NR09 4857 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 VPS13DQ5THJ4 4388 aa7.46□□□□□ -1.22
SCAMP4-208ENST00000489554 H3BVH4 76 aa7.45□□□□□ -1.22
SCAMP4-208ENST00000489554 NXPH4O95158 308 aa7.45□□□□□ -1.22
SCAMP4-208ENST00000489554 HTN3P15516 51 aa7.45□□□□□ -1.22
SCAMP4-208ENST00000489554 S100A4P26447 101 aaKnown RBP7.45□□□□□ -1.22
SCAMP4-208ENST00000489554 ASIPP42127 132 aa7.45□□□□□ -1.22
SCAMP4-208ENST00000489554 FAM104BQ5XKR9 115 aa7.45□□□□□ -1.22
SCAMP4-208ENST00000489554 ORMDL3Q8N138 153 aa7.45□□□□□ -1.22
SCAMP4-208ENST00000489554 POM121L12Q8N7R1 296 aa7.45□□□□□ -1.22
SCAMP4-208ENST00000489554 DNAH6Q9C0G6 4158 aa7.44□□□□□ -1.22
SCAMP4-208ENST00000489554 NTF3P20783 257 aa7.44□□□□□ -1.22
SCAMP4-208ENST00000489554 AMTP48728 403 aa7.44□□□□□ -1.22
SCAMP4-208ENST00000489554 PYY3Q5JQD4 70 aa7.44□□□□□ -1.22
SCAMP4-208ENST00000489554 OR10AG1Q8NH19 301 aa7.44□□□□□ -1.22
SCAMP4-208ENST00000489554 TIMM8BQ9Y5J9 83 aaPredicted RBP7.44□□□□□ -1.22
SCAMP4-208ENST00000489554 MUC21A0A0G2JKD1 596 aa7.43□□□□□ -1.22
SCAMP4-208ENST00000489554 MUC21A0A140T8X8 626 aa7.43□□□□□ -1.22
SCAMP4-208ENST00000489554 SCGB1D1O95968 90 aa7.43□□□□□ -1.22
SCAMP4-208ENST00000489554 PPP1R17O96001 155 aa7.43□□□□□ -1.22
SCAMP4-208ENST00000489554 LINC00614P0C842 121 aa7.43□□□□□ -1.22
SCAMP4-208ENST00000489554 DEFB130BP0DP73 79 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms