RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 IGHV3-30-3P0DP02 117 aa8.41□□□□□ -1.06
SRRM1-216ENST00000489130 IGHV3-30-5P0DP03 117 aa8.41□□□□□ -1.06
SRRM1-216ENST00000489130 TPT1P13693 172 aaKnown RBP8.41□□□□□ -1.06
SRRM1-216ENST00000489130 EIF5AP63241 154 aaKnown RBP8.41□□□□□ -1.06
SRRM1-216ENST00000489130 GAGE1Q13065 139 aa8.41□□□□□ -1.06
SRRM1-216ENST00000489130 GAGE4Q13068 117 aa8.41□□□□□ -1.06
SRRM1-216ENST00000489130 GAGE5Q13069 117 aa8.41□□□□□ -1.06
SRRM1-216ENST00000489130 LAGE3Q14657 143 aa8.41□□□□□ -1.06
SRRM1-216ENST00000489130 GAGE13Q4V321 117 aa8.41□□□□□ -1.06
SRRM1-216ENST00000489130 SFRP2Q96HF1 295 aa8.41□□□□□ -1.06
SRRM1-216ENST00000489130 MLST8Q9BVC4 326 aa8.41□□□□□ -1.06
SRRM1-216ENST00000489130 LRCOL1A6NCL2 159 aa8.4□□□□□ -1.06
SRRM1-216ENST00000489130 M0R381 172 aa8.4□□□□□ -1.06
SRRM1-216ENST00000489130 PSCAO43653 123 aa8.4□□□□□ -1.06
SRRM1-216ENST00000489130 PFDN1O60925 122 aa8.4□□□□□ -1.06
SRRM1-216ENST00000489130 H2AFB1P0C5Y9 115 aa8.4□□□□□ -1.06
SRRM1-216ENST00000489130 ZFP82Q8N141 532 aa8.4□□□□□ -1.06
SRRM1-216ENST00000489130 Q9HAA7 133 aa8.4□□□□□ -1.06
SRRM1-216ENST00000489130 ABCA13Q86UQ4 5058 aa8.4□□□□□ -1.06
SRRM1-216ENST00000489130 A0A087WWC5 75 aa8.39□□□□□ -1.07
SRRM1-216ENST00000489130 A0A087WWL8 130 aa8.39□□□□□ -1.07
SRRM1-216ENST00000489130 CXCL1P09341 107 aa8.39□□□□□ -1.07
SRRM1-216ENST00000489130 KRTAP10-1P60331 282 aa8.39□□□□□ -1.07
SRRM1-216ENST00000489130 FAM74A4Q5TZK3 123 aa8.39□□□□□ -1.07
SRRM1-216ENST00000489130 TMUB2Q71RG4 321 aa8.39□□□□□ -1.07
SRRM1-216ENST00000489130 Q8N3U1 123 aa8.39□□□□□ -1.07
SRRM1-216ENST00000489130 TRBV10-1A0A0K0K1A3 114 aa8.38□□□□□ -1.07
SRRM1-216ENST00000489130 XGP55808 180 aa8.38□□□□□ -1.07
SRRM1-216ENST00000489130 BAGE2Q86Y30 109 aa8.38□□□□□ -1.07
SRRM1-216ENST00000489130 NTN5Q8WTR8 489 aaPredicted RBP8.38□□□□□ -1.07
SRRM1-216ENST00000489130 GCSHP23434 173 aa8.37□□□□□ -1.07
SRRM1-216ENST00000489130 RPL19P84098 196 aaKnown RBP8.37□□□□□ -1.07
SRRM1-216ENST00000489130 Q8N814 137 aa8.37□□□□□ -1.07
SRRM1-216ENST00000489130 MANBALQ9NQG1 85 aa8.37□□□□□ -1.07
SRRM1-216ENST00000489130 TRAV8-3A0A0A6YYJ7 113 aa8.36□□□□□ -1.07
SRRM1-216ENST00000489130 TRAV1-1A0A0B4J248 108 aa8.36□□□□□ -1.07
SRRM1-216ENST00000489130 SNAI2O43623 268 aa8.36□□□□□ -1.07
SRRM1-216ENST00000489130 RAB5CP51148 216 aa8.36□□□□□ -1.07
SRRM1-216ENST00000489130 C11orf52Q96A22 123 aa8.36□□□□□ -1.07
SRRM1-216ENST00000489130 SSBP4Q9BWG4 385 aaPredicted RBP8.36□□□□□ -1.07
SRRM1-216ENST00000489130 TM2D2Q9BX73 214 aa8.36□□□□□ -1.07
SRRM1-216ENST00000489130 TRBV7-3A0A075B6L6 115 aa8.35□□□□□ -1.07
SRRM1-216ENST00000489130 IGLV5-52A0A0A0MRZ9 124 aa8.35□□□□□ -1.07
SRRM1-216ENST00000489130 OR5AL1P0C617 328 aa8.35□□□□□ -1.07
SRRM1-216ENST00000489130 RPL35P42766 123 aaKnown RBP8.35□□□□□ -1.07
SRRM1-216ENST00000489130 CCL20P78556 96 aa8.35□□□□□ -1.07
SRRM1-216ENST00000489130 TOR2AQ5JU69 321 aa8.35□□□□□ -1.07
SRRM1-216ENST00000489130 LCE2CQ5TA81 110 aa8.35□□□□□ -1.07
SRRM1-216ENST00000489130 DAZ4Q86SG3 579 aaKnown RBP8.35□□□□□ -1.07
SRRM1-216ENST00000489130 NIT1Q86X76 327 aa8.35□□□□□ -1.07
SRRM1-216ENST00000489130 OR10G8Q8NGN5 311 aa8.35□□□□□ -1.07
SRRM1-216ENST00000489130 OR10AG1Q8NH19 301 aa8.35□□□□□ -1.07
SRRM1-216ENST00000489130 DERL1Q9BUN8 251 aa8.35□□□□□ -1.07
SRRM1-216ENST00000489130 DAZ3Q9NR90 486 aaKnown RBP8.35□□□□□ -1.07
SRRM1-216ENST00000489130 GNG13Q9P2W3 67 aa8.35□□□□□ -1.07
SRRM1-216ENST00000489130 EPM2AB3EWF7 344 aa8.34□□□□□ -1.07
SRRM1-216ENST00000489130 RAB4BP61018 213 aa8.34□□□□□ -1.07
SRRM1-216ENST00000489130 UBE2D3P61077 147 aa8.34□□□□□ -1.07
SRRM1-216ENST00000489130 UBE2D2P62837 147 aa8.34□□□□□ -1.07
SRRM1-216ENST00000489130 RPL36AP83881 106 aaKnown RBP8.34□□□□□ -1.07
SRRM1-216ENST00000489130 EIF5AL1Q6IS14 154 aaKnown RBP8.34□□□□□ -1.07
SRRM1-216ENST00000489130 PRR27Q6MZM9 219 aa8.34□□□□□ -1.07
SRRM1-216ENST00000489130 TCTE3Q8IZS6 198 aa8.34□□□□□ -1.07
SRRM1-216ENST00000489130 RPL36ALQ969Q0 106 aaKnown RBP8.34□□□□□ -1.07
SRRM1-216ENST00000489130 FAT1Q14517 4588 aa8.34□□□□□ -1.07
SRRM1-216ENST00000489130 SULT1A2P50226 295 aa8.33□□□□□ -1.08
SRRM1-216ENST00000489130 CHCHD7Q9BUK0 85 aa8.33□□□□□ -1.08
SRRM1-216ENST00000489130 URGCP-MRPS24S4R325 110 aa8.33□□□□□ -1.08
SRRM1-216ENST00000489130 TEX46H3BTG2 121 aa8.32□□□□□ -1.08
SRRM1-216ENST00000489130 IGLV2-8P01709 118 aa8.32□□□□□ -1.08
SRRM1-216ENST00000489130 WFDC2Q14508 124 aa8.32□□□□□ -1.08
SRRM1-216ENST00000489130 ZNF56Q15929 161 aa8.32□□□□□ -1.08
SRRM1-216ENST00000489130 CENPWQ5EE01 88 aa8.32□□□□□ -1.08
SRRM1-216ENST00000489130 SPANXN1Q5VSR9 72 aa8.32□□□□□ -1.08
SRRM1-216ENST00000489130 NEXN-AS1Q8NBZ9 246 aa8.32□□□□□ -1.08
SRRM1-216ENST00000489130 SMIM12Q96EX1 92 aa8.32□□□□□ -1.08
SRRM1-216ENST00000489130 TMEM70Q9BUB7 260 aa8.32□□□□□ -1.08
SRRM1-216ENST00000489130 COX11Q9Y6N1 276 aa8.32□□□□□ -1.08
SRRM1-216ENST00000489130 A0A087WX48 190 aa8.3□□□□□ -1.08
SRRM1-216ENST00000489130 TRBV6-8A0A0A6YYG3 113 aa8.3□□□□□ -1.08
SRRM1-216ENST00000489130 MUC21A0A0G2JKD1 596 aa8.3□□□□□ -1.08
SRRM1-216ENST00000489130 MUC21A0A140T8X8 626 aa8.3□□□□□ -1.08
SRRM1-216ENST00000489130 PDE6DO43924 150 aa8.3□□□□□ -1.08
SRRM1-216ENST00000489130 C1QBP02746 253 aa8.3□□□□□ -1.08
SRRM1-216ENST00000489130 MEF2BQ02080 365 aaPredicted RBP8.3□□□□□ -1.08
SRRM1-216ENST00000489130 ELOBQ15370 118 aa8.3□□□□□ -1.08
SRRM1-216ENST00000489130 SLC51BQ86UW2 128 aa8.3□□□□□ -1.08
SRRM1-216ENST00000489130 RMI2Q96E14 147 aa8.3□□□□□ -1.08
SRRM1-216ENST00000489130 AP1S3Q96PC3 154 aa8.3□□□□□ -1.08
SRRM1-216ENST00000489130 KLK12Q9UKR0 248 aa8.3□□□□□ -1.08
SRRM1-216ENST00000489130 KIF25-AS1Q9Y6Z4 181 aa8.3□□□□□ -1.08
SRRM1-216ENST00000489130 DNAH8Q96JB1 4490 aa8.3□□□□□ -1.08
SRRM1-216ENST00000489130 C19orf71A6NCJ1 209 aa8.29□□□□□ -1.08
SRRM1-216ENST00000489130 IFNA1P01562 189 aa8.29□□□□□ -1.08
SRRM1-216ENST00000489130 IGLC6P0CF74 106 aa8.29□□□□□ -1.08
SRRM1-216ENST00000489130 GNG4P50150 75 aa8.29□□□□□ -1.08
SRRM1-216ENST00000489130 Q5VSD8 79 aa8.29□□□□□ -1.08
SRRM1-216ENST00000489130 KCNIP4Q6PIL6 250 aa8.29□□□□□ -1.08
SRRM1-216ENST00000489130 ATRAIDQ6UW56 229 aa8.29□□□□□ -1.08
SRRM1-216ENST00000489130 FRZBQ92765 325 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms