RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 ZFP82Q8N141 532 aa15.48■□□□□ 0.07
CUL4A-209ENST00000488558 C14orf178Q8N769 122 aaPredicted RBP15.48■□□□□ 0.07
CUL4A-209ENST00000488558 LRCOL1A6NCL2 159 aa15.47■□□□□ 0.07
CUL4A-209ENST00000488558 IGHV3-30P01768 117 aa15.47■□□□□ 0.07
CUL4A-209ENST00000488558 IGHV3-33P01772 117 aa15.47■□□□□ 0.07
CUL4A-209ENST00000488558 IGHV3-30-3P0DP02 117 aa15.47■□□□□ 0.07
CUL4A-209ENST00000488558 IGHV3-30-5P0DP03 117 aa15.47■□□□□ 0.07
CUL4A-209ENST00000488558 FUSP35637 526 aaKnown RBP eCLIP15.47■□□□□ 0.07
CUL4A-209ENST00000488558 MLST8Q9BVC4 326 aa15.47■□□□□ 0.07
CUL4A-209ENST00000488558 TMSB15BA0A087X1C1 80 aa15.46■□□□□ 0.07
CUL4A-209ENST00000488558 SCO2A0A1W2PP80 73 aa15.46■□□□□ 0.07
CUL4A-209ENST00000488558 FAM74A4Q5TZK3 123 aa15.46■□□□□ 0.07
CUL4A-209ENST00000488558 A0A1B0GV50 99 aa15.45■□□□□ 0.06
CUL4A-209ENST00000488558 M0R381 172 aa15.45■□□□□ 0.06
CUL4A-209ENST00000488558 NTN5Q8WTR8 489 aaPredicted RBP15.45■□□□□ 0.06
CUL4A-209ENST00000488558 Q9HAA7 133 aa15.45■□□□□ 0.06
CUL4A-209ENST00000488558 Q9UF83 564 aa15.45■□□□□ 0.06
CUL4A-209ENST00000488558 TRBV10-1A0A0K0K1A3 114 aa15.44■□□□□ 0.06
CUL4A-209ENST00000488558 TMUB2Q71RG4 321 aa15.44■□□□□ 0.06
CUL4A-209ENST00000488558 A0A087WWL8 130 aa15.43■□□□□ 0.06
CUL4A-209ENST00000488558 KRTAP10-1P60331 282 aa15.43■□□□□ 0.06
CUL4A-209ENST00000488558 BAGE2Q86Y30 109 aa15.43■□□□□ 0.06
CUL4A-209ENST00000488558 TM2D2Q9BX73 214 aa15.43■□□□□ 0.06
CUL4A-209ENST00000488558 MANBALQ9NQG1 85 aa15.43■□□□□ 0.06
CUL4A-209ENST00000488558 GCSHP23434 173 aa15.42■□□□□ 0.06
CUL4A-209ENST00000488558 TOR2AQ5JU69 321 aa15.42■□□□□ 0.06
CUL4A-209ENST00000488558 TRAV1-1A0A0B4J248 108 aa15.41■□□□□ 0.06
CUL4A-209ENST00000488558 RAB5CP51148 216 aa15.41■□□□□ 0.06
CUL4A-209ENST00000488558 XGP55808 180 aa15.41■□□□□ 0.06
CUL4A-209ENST00000488558 TRAV8-3A0A0A6YYJ7 113 aa15.4■□□□□ 0.06
CUL4A-209ENST00000488558 EIF5AL1Q6IS14 154 aaKnown RBP15.4■□□□□ 0.06
CUL4A-209ENST00000488558 Q8N3U1 123 aa15.4■□□□□ 0.06
CUL4A-209ENST00000488558 Q8N814 137 aa15.4■□□□□ 0.06
CUL4A-209ENST00000488558 C11orf52Q96A22 123 aa15.4■□□□□ 0.06
CUL4A-209ENST00000488558 IGLV5-52A0A0A0MRZ9 124 aa15.39■□□□□ 0.05
CUL4A-209ENST00000488558 SNAI2O43623 268 aa15.39■□□□□ 0.05
CUL4A-209ENST00000488558 RPL19P84098 196 aaKnown RBP15.39■□□□□ 0.05
CUL4A-209ENST00000488558 SSBP4Q9BWG4 385 aaPredicted RBP15.39■□□□□ 0.05
CUL4A-209ENST00000488558 OR5AL1P0C617 328 aa15.38■□□□□ 0.05
CUL4A-209ENST00000488558 RPL35P42766 123 aaKnown RBP15.38■□□□□ 0.05
CUL4A-209ENST00000488558 RPL36AP83881 106 aaKnown RBP15.38■□□□□ 0.05
CUL4A-209ENST00000488558 OR10G8Q8NGN5 311 aa15.38■□□□□ 0.05
CUL4A-209ENST00000488558 OR10AG1Q8NH19 301 aa15.38■□□□□ 0.05
CUL4A-209ENST00000488558 RPL36ALQ969Q0 106 aaKnown RBP15.38■□□□□ 0.05
CUL4A-209ENST00000488558 RAB4BP61018 213 aa15.37■□□□□ 0.05
CUL4A-209ENST00000488558 UBE2D3P61077 147 aa15.37■□□□□ 0.05
CUL4A-209ENST00000488558 UBE2D2P62837 147 aa15.37■□□□□ 0.05
CUL4A-209ENST00000488558 DAZ4Q86SG3 579 aaKnown RBP15.37■□□□□ 0.05
CUL4A-209ENST00000488558 NIT1Q86X76 327 aa15.37■□□□□ 0.05
CUL4A-209ENST00000488558 CHCHD7Q9BUK0 85 aa15.37■□□□□ 0.05
CUL4A-209ENST00000488558 DAZ3Q9NR90 486 aaKnown RBP15.37■□□□□ 0.05
CUL4A-209ENST00000488558 GNG13Q9P2W3 67 aa15.37■□□□□ 0.05
CUL4A-209ENST00000488558 URGCP-MRPS24S4R325 110 aa15.37■□□□□ 0.05
CUL4A-209ENST00000488558 TRBV7-3A0A075B6L6 115 aa15.36■□□□□ 0.05
CUL4A-209ENST00000488558 EPM2AB3EWF7 344 aa15.36■□□□□ 0.05
CUL4A-209ENST00000488558 TEX46H3BTG2 121 aa15.36■□□□□ 0.05
CUL4A-209ENST00000488558 PRR27Q6MZM9 219 aa15.36■□□□□ 0.05
CUL4A-209ENST00000488558 COX11Q9Y6N1 276 aa15.36■□□□□ 0.05
CUL4A-209ENST00000488558 CCL20P78556 96 aa15.35■□□□□ 0.05
CUL4A-209ENST00000488558 TCTE3Q8IZS6 198 aa15.35■□□□□ 0.05
CUL4A-209ENST00000488558 TMEM70Q9BUB7 260 aa15.35■□□□□ 0.05
CUL4A-209ENST00000488558 SULT1A2P50226 295 aa15.33■□□□□ 0.04
CUL4A-209ENST00000488558 ZNF56Q15929 161 aa15.33■□□□□ 0.04
CUL4A-209ENST00000488558 SPANXN1Q5VSR9 72 aa15.33■□□□□ 0.04
CUL4A-209ENST00000488558 RMI2Q96E14 147 aa15.33■□□□□ 0.04
CUL4A-209ENST00000488558 SMIM12Q96EX1 92 aa15.33■□□□□ 0.04
CUL4A-209ENST00000488558 DERL1Q9BUN8 251 aa15.33■□□□□ 0.04
CUL4A-209ENST00000488558 CENPWQ5EE01 88 aa15.32■□□□□ 0.04
CUL4A-209ENST00000488558 ELOBQ15370 118 aa15.31■□□□□ 0.04
CUL4A-209ENST00000488558 A0A087WX48 190 aa15.3■□□□□ 0.04
CUL4A-209ENST00000488558 MEF2BQ02080 365 aaPredicted RBP15.3■□□□□ 0.04
CUL4A-209ENST00000488558 WFDC2Q14508 124 aa15.3■□□□□ 0.04
CUL4A-209ENST00000488558 NEXN-AS1Q8NBZ9 246 aa15.3■□□□□ 0.04
CUL4A-209ENST00000488558 FRZBQ92765 325 aa15.3■□□□□ 0.04
CUL4A-209ENST00000488558 AP1S3Q96PC3 154 aa15.3■□□□□ 0.04
CUL4A-209ENST00000488558 PDE6DO43924 150 aa15.29■□□□□ 0.04
CUL4A-209ENST00000488558 IFNA1P01562 189 aa15.29■□□□□ 0.04
CUL4A-209ENST00000488558 IGLV2-8P01709 118 aa15.29■□□□□ 0.04
CUL4A-209ENST00000488558 C1QBP02746 253 aa15.29■□□□□ 0.04
CUL4A-209ENST00000488558 KCNIP4Q6PIL6 250 aa15.29■□□□□ 0.04
CUL4A-209ENST00000488558 SLC51BQ86UW2 128 aa15.29■□□□□ 0.04
CUL4A-209ENST00000488558 FAT1Q14517 4588 aa15.29■□□□□ 0.04
CUL4A-209ENST00000488558 TRBV6-8A0A0A6YYG3 113 aa15.28■□□□□ 0.04
CUL4A-209ENST00000488558 RPS20P60866 119 aaKnown RBP15.28■□□□□ 0.04
CUL4A-209ENST00000488558 Q5VSD8 79 aa15.28■□□□□ 0.04
CUL4A-209ENST00000488558 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.28■□□□□ 0.04
CUL4A-209ENST00000488558 KLK12Q9UKR0 248 aa15.28■□□□□ 0.04
CUL4A-209ENST00000488558 KIF25-AS1Q9Y6Z4 181 aa15.28■□□□□ 0.04
CUL4A-209ENST00000488558 C19orf71A6NCJ1 209 aa15.27■□□□□ 0.04
CUL4A-209ENST00000488558 IGLC6P0CF74 106 aa15.27■□□□□ 0.04
CUL4A-209ENST00000488558 SMIM17P0DL12 118 aa15.27■□□□□ 0.04
CUL4A-209ENST00000488558 ATRAIDQ6UW56 229 aa15.27■□□□□ 0.04
CUL4A-209ENST00000488558 MUC21A0A0G2JKD1 596 aa15.26■□□□□ 0.03
CUL4A-209ENST00000488558 MUC21A0A140T8X8 626 aa15.26■□□□□ 0.03
CUL4A-209ENST00000488558 RBFOX3A6NFN3 312 aa15.26■□□□□ 0.03
CUL4A-209ENST00000488558 BCL2P10415 239 aa15.26■□□□□ 0.03
CUL4A-209ENST00000488558 GNG4P50150 75 aa15.26■□□□□ 0.03
CUL4A-209ENST00000488558 DAZAP1Q96EP5 407 aaKnown RBP15.26■□□□□ 0.03
CUL4A-209ENST00000488558 VAX2Q9UIW0 290 aa15.26■□□□□ 0.03
CUL4A-209ENST00000488558 DNAH8Q96JB1 4490 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms