RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 GAGE1Q13065 139 aa16.15■□□□□ 0.18
RHBDD3-205ENST00000488106 GAGE4Q13068 117 aa16.15■□□□□ 0.18
RHBDD3-205ENST00000488106 GAGE5Q13069 117 aa16.15■□□□□ 0.18
RHBDD3-205ENST00000488106 GAGE13Q4V321 117 aa16.15■□□□□ 0.18
RHBDD3-205ENST00000488106 LYPD6BQ8NI32 183 aa16.15■□□□□ 0.18
RHBDD3-205ENST00000488106 LY96Q9Y6Y9 160 aa16.15■□□□□ 0.18
RHBDD3-205ENST00000488106 SNAI2O43623 268 aa16.14■□□□□ 0.17
RHBDD3-205ENST00000488106 GZMBP10144 247 aa16.14■□□□□ 0.17
RHBDD3-205ENST00000488106 LINC00315P59091 139 aa16.14■□□□□ 0.17
RHBDD3-205ENST00000488106 SSTP61278 116 aa16.14■□□□□ 0.17
RHBDD3-205ENST00000488106 OR2D3Q8NGH3 330 aa16.14■□□□□ 0.17
RHBDD3-205ENST00000488106 Q9UF83 564 aa16.14■□□□□ 0.17
RHBDD3-205ENST00000488106 C19orf71A6NCJ1 209 aa16.13■□□□□ 0.17
RHBDD3-205ENST00000488106 CRYGDP07320 174 aa16.13■□□□□ 0.17
RHBDD3-205ENST00000488106 TOR2AQ5JU69 321 aa16.13■□□□□ 0.17
RHBDD3-205ENST00000488106 SPANXN1Q5VSR9 72 aa16.13■□□□□ 0.17
RHBDD3-205ENST00000488106 ATP6V0E2Q8NHE4 81 aa16.13■□□□□ 0.17
RHBDD3-205ENST00000488106 TPPP3Q9BW30 176 aa16.13■□□□□ 0.17
RHBDD3-205ENST00000488106 P01737 135 aa16.12■□□□□ 0.17
RHBDD3-205ENST00000488106 OR5AL1P0C617 328 aa16.12■□□□□ 0.17
RHBDD3-205ENST00000488106 TIRAPP58753 221 aa16.12■□□□□ 0.17
RHBDD3-205ENST00000488106 SSBP4Q9BWG4 385 aaPredicted RBP16.12■□□□□ 0.17
RHBDD3-205ENST00000488106 CEBPGP53567 150 aa16.11■□□□□ 0.17
RHBDD3-205ENST00000488106 OR10J3Q5JRS4 329 aa16.11■□□□□ 0.17
RHBDD3-205ENST00000488106 BIN3Q9NQY0 253 aa16.11■□□□□ 0.17
RHBDD3-205ENST00000488106 DNAH11Q96DT5 4516 aa16.11■□□□□ 0.17
RHBDD3-205ENST00000488106 LINC00694P0DN24 101 aa16.1■□□□□ 0.17
RHBDD3-205ENST00000488106 RPS20P60866 119 aaKnown RBP16.1■□□□□ 0.17
RHBDD3-205ENST00000488106 GTSF1LQ9H1H1 148 aa16.1■□□□□ 0.17
RHBDD3-205ENST00000488106 TRAV9-2A0A087WT02 112 aa16.09■□□□□ 0.17
RHBDD3-205ENST00000488106 TMEM250H0YL14 139 aa16.09■□□□□ 0.17
RHBDD3-205ENST00000488106 DNAH10OSP0CZ25 163 aa16.09■□□□□ 0.17
RHBDD3-205ENST00000488106 EVI2AP22794 236 aa16.09■□□□□ 0.17
RHBDD3-205ENST00000488106 ZNF56Q15929 161 aa16.09■□□□□ 0.17
RHBDD3-205ENST00000488106 FER1L6-AS1Q8NA97 138 aa16.09■□□□□ 0.17
RHBDD3-205ENST00000488106 EIF5A2Q9GZV4 153 aaKnown RBP16.09■□□□□ 0.17
RHBDD3-205ENST00000488106 DYNC1H1Q14204 4646 aaKnown RBP16.09■□□□□ 0.17
RHBDD3-205ENST00000488106 TRAV8-6A0A0B4J262 113 aa16.08■□□□□ 0.16
RHBDD3-205ENST00000488106 K7EN84 100 aa16.08■□□□□ 0.16
RHBDD3-205ENST00000488106 IGHV3-38A0A0C4DH36 116 aa16.07■□□□□ 0.16
RHBDD3-205ENST00000488106 XKRY2A2RUG3 117 aa16.07■□□□□ 0.16
RHBDD3-205ENST00000488106 IGLC6P0CF74 106 aa16.07■□□□□ 0.16
RHBDD3-205ENST00000488106 LELP1Q5T871 98 aa16.07■□□□□ 0.16
RHBDD3-205ENST00000488106 OCC1Q8TAD7 63 aa16.07■□□□□ 0.16
RHBDD3-205ENST00000488106 TNFRSF18Q9Y5U5 241 aa16.07■□□□□ 0.16
RHBDD3-205ENST00000488106 BTF3P20290 206 aaKnown RBP16.06■□□□□ 0.16
RHBDD3-205ENST00000488106 NUDT10Q8NFP7 164 aa16.06■□□□□ 0.16
RHBDD3-205ENST00000488106 NUDT11Q96G61 164 aa16.06■□□□□ 0.16
RHBDD3-205ENST00000488106 FAM210AQ96ND0 272 aa16.06■□□□□ 0.16
RHBDD3-205ENST00000488106 AP1S3Q96PC3 154 aa16.06■□□□□ 0.16
RHBDD3-205ENST00000488106 RNASE7Q9H1E1 156 aaKnown RBP16.06■□□□□ 0.16
RHBDD3-205ENST00000488106 RAB4BP61018 213 aa16.04■□□□□ 0.16
RHBDD3-205ENST00000488106 Q6ZRN7 208 aaPredicted RBP16.04■□□□□ 0.16
RHBDD3-205ENST00000488106 F5H697 171 aa16.03■□□□□ 0.16
RHBDD3-205ENST00000488106 SMIM17P0DL12 118 aa16.03■□□□□ 0.16
RHBDD3-205ENST00000488106 LINC01556Q5JQF7 62 aa16.03■□□□□ 0.16
RHBDD3-205ENST00000488106 RPP21Q9H633 154 aaKnown RBP16.03■□□□□ 0.16
RHBDD3-205ENST00000488106 MSRB1Q9NZV6 116 aa16.03■□□□□ 0.16
RHBDD3-205ENST00000488106 TRBV10-1A0A0K0K1A3 114 aa16.02■□□□□ 0.16
RHBDD3-205ENST00000488106 K7EP13 123 aa16.02■□□□□ 0.16
RHBDD3-205ENST00000488106 IGHV3-30P01768 117 aa16.02■□□□□ 0.16
RHBDD3-205ENST00000488106 IGHV3-33P01772 117 aa16.02■□□□□ 0.16
RHBDD3-205ENST00000488106 IGHV3-30-3P0DP02 117 aa16.02■□□□□ 0.16
RHBDD3-205ENST00000488106 IGHV3-30-5P0DP03 117 aa16.02■□□□□ 0.16
RHBDD3-205ENST00000488106 RPL36AP83881 106 aaKnown RBP16.02■□□□□ 0.16
RHBDD3-205ENST00000488106 LYZL1Q6UWQ5 148 aa16.02■□□□□ 0.16
RHBDD3-205ENST00000488106 C10orf126Q8N4M7 172 aa16.02■□□□□ 0.16
RHBDD3-205ENST00000488106 RPL36ALQ969Q0 106 aaKnown RBP16.02■□□□□ 0.16
RHBDD3-205ENST00000488106 SMIM7Q9BQ49 75 aa16.02■□□□□ 0.16
RHBDD3-205ENST00000488106 MGPP08493 103 aa16.01■□□□□ 0.15
RHBDD3-205ENST00000488106 CACNG7P62955 275 aa16.01■□□□□ 0.15
RHBDD3-205ENST00000488106 TEX261Q6UWH6 196 aa16.01■□□□□ 0.15
RHBDD3-205ENST00000488106 F2Z2F3 143 aa16■□□□□ 0.15
RHBDD3-205ENST00000488106 NFE4Q86UQ8 179 aa16■□□□□ 0.15
RHBDD3-205ENST00000488106 KIAA1109Q2LD37 5005 aa16■□□□□ 0.15
RHBDD3-205ENST00000488106 TRBV7-3A0A075B6L6 115 aa15.99■□□□□ 0.15
RHBDD3-205ENST00000488106 SRP19P09132 144 aaKnown RBP15.99■□□□□ 0.15
RHBDD3-205ENST00000488106 UBE2D3P61077 147 aa15.99■□□□□ 0.15
RHBDD3-205ENST00000488106 UBE2D2P62837 147 aa15.99■□□□□ 0.15
RHBDD3-205ENST00000488106 Q8N3U1 123 aa15.99■□□□□ 0.15
RHBDD3-205ENST00000488106 NEXN-AS1Q8NBZ9 246 aa15.99■□□□□ 0.15
RHBDD3-205ENST00000488106 KIF25-AS1Q9Y6Z4 181 aa15.99■□□□□ 0.15
RHBDD3-205ENST00000488106 A0A087WWC5 75 aa15.98■□□□□ 0.15
RHBDD3-205ENST00000488106 CTRLP40313 264 aa15.98■□□□□ 0.15
RHBDD3-205ENST00000488106 ZNF727A8MUV8 499 aa15.97■□□□□ 0.15
RHBDD3-205ENST00000488106 OR10G8Q8NGN5 311 aa15.97■□□□□ 0.15
RHBDD3-205ENST00000488106 GATCO43716 136 aaKnown RBP15.96■□□□□ 0.15
RHBDD3-205ENST00000488106 NDUFS6O75380 124 aaKnown RBP15.96■□□□□ 0.15
RHBDD3-205ENST00000488106 SPATA12Q7Z6I5 190 aa15.96■□□□□ 0.15
RHBDD3-205ENST00000488106 Q9HAA7 133 aa15.96■□□□□ 0.15
RHBDD3-205ENST00000488106 TRGC1P0CF51 173 aa15.95■□□□□ 0.14
RHBDD3-205ENST00000488106 NTF3P20783 257 aa15.95■□□□□ 0.14
RHBDD3-205ENST00000488106 ERVFC1-1P60608 527 aa15.95■□□□□ 0.14
RHBDD3-205ENST00000488106 C16orf90A8MZG2 172 aa15.94■□□□□ 0.14
RHBDD3-205ENST00000488106 IBA57-AS1B1ANH7 110 aa15.94■□□□□ 0.14
RHBDD3-205ENST00000488106 LINC01551Q86U37 167 aa15.94■□□□□ 0.14
RHBDD3-205ENST00000488106 TWIST1Q15672 202 aa15.93■□□□□ 0.14
RHBDD3-205ENST00000488106 SUMO4Q6EEV6 95 aa15.93■□□□□ 0.14
RHBDD3-205ENST00000488106 FAM231DQ6ZW35 169 aa15.93■□□□□ 0.14
RHBDD3-205ENST00000488106 GTSF1Q8WW33 167 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms