RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 IGHV3-30-5P0DP03 117 aa12.8□□□□□ -0.36
CLIP2-206ENST00000487091 C14orf178Q8N769 122 aaPredicted RBP12.8□□□□□ -0.36
CLIP2-206ENST00000487091 A0A087WWC5 75 aa12.79□□□□□ -0.36
CLIP2-206ENST00000487091 TMSB15BA0A087X1C1 80 aa12.79□□□□□ -0.36
CLIP2-206ENST00000487091 PFDN1O60925 122 aa12.79□□□□□ -0.36
CLIP2-206ENST00000487091 H2AFB1P0C5Y9 115 aa12.79□□□□□ -0.36
CLIP2-206ENST00000487091 LAGE3Q14657 143 aa12.79□□□□□ -0.36
CLIP2-206ENST00000487091 Q9UF83 564 aa12.79□□□□□ -0.36
CLIP2-206ENST00000487091 A0A1B0GV50 99 aa12.78□□□□□ -0.36
CLIP2-206ENST00000487091 SCO2A0A1W2PP80 73 aa12.78□□□□□ -0.36
CLIP2-206ENST00000487091 LRCOL1A6NCL2 159 aa12.78□□□□□ -0.36
CLIP2-206ENST00000487091 TMUB2Q71RG4 321 aa12.78□□□□□ -0.36
CLIP2-206ENST00000487091 ZFP82Q8N141 532 aa12.78□□□□□ -0.36
CLIP2-206ENST00000487091 MLST8Q9BVC4 326 aa12.78□□□□□ -0.36
CLIP2-206ENST00000487091 M0R381 172 aa12.77□□□□□ -0.37
CLIP2-206ENST00000487091 CXCL1P09341 107 aa12.77□□□□□ -0.37
CLIP2-206ENST00000487091 FAM74A4Q5TZK3 123 aa12.77□□□□□ -0.37
CLIP2-206ENST00000487091 BAGE2Q86Y30 109 aa12.77□□□□□ -0.37
CLIP2-206ENST00000487091 Q9HAA7 133 aa12.77□□□□□ -0.37
CLIP2-206ENST00000487091 A0A087WWL8 130 aa12.76□□□□□ -0.37
CLIP2-206ENST00000487091 KRTAP10-1P60331 282 aa12.76□□□□□ -0.37
CLIP2-206ENST00000487091 TRBV10-1A0A0K0K1A3 114 aa12.75□□□□□ -0.37
CLIP2-206ENST00000487091 GCSHP23434 173 aa12.75□□□□□ -0.37
CLIP2-206ENST00000487091 XGP55808 180 aa12.75□□□□□ -0.37
CLIP2-206ENST00000487091 NTN5Q8WTR8 489 aaPredicted RBP12.75□□□□□ -0.37
CLIP2-206ENST00000487091 TM2D2Q9BX73 214 aa12.75□□□□□ -0.37
CLIP2-206ENST00000487091 RAB5CP51148 216 aa12.74□□□□□ -0.37
CLIP2-206ENST00000487091 TRAV8-3A0A0A6YYJ7 113 aa12.73□□□□□ -0.37
CLIP2-206ENST00000487091 TRAV1-1A0A0B4J248 108 aa12.73□□□□□ -0.37
CLIP2-206ENST00000487091 TOR2AQ5JU69 321 aa12.73□□□□□ -0.37
CLIP2-206ENST00000487091 EIF5AL1Q6IS14 154 aaKnown RBP12.73□□□□□ -0.37
CLIP2-206ENST00000487091 MANBALQ9NQG1 85 aa12.73□□□□□ -0.37
CLIP2-206ENST00000487091 RPL36AP83881 106 aaKnown RBP12.72□□□□□ -0.37
CLIP2-206ENST00000487091 RPL19P84098 196 aaKnown RBP12.72□□□□□ -0.37
CLIP2-206ENST00000487091 Q8N3U1 123 aa12.72□□□□□ -0.37
CLIP2-206ENST00000487091 Q8N814 137 aa12.72□□□□□ -0.37
CLIP2-206ENST00000487091 RPL36ALQ969Q0 106 aaKnown RBP12.72□□□□□ -0.37
CLIP2-206ENST00000487091 SSBP4Q9BWG4 385 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-206ENST00000487091 IGLV5-52A0A0A0MRZ9 124 aa12.71□□□□□ -0.37
CLIP2-206ENST00000487091 SNAI2O43623 268 aa12.71□□□□□ -0.37
CLIP2-206ENST00000487091 OR5AL1P0C617 328 aa12.71□□□□□ -0.37
CLIP2-206ENST00000487091 CCL20P78556 96 aa12.71□□□□□ -0.37
CLIP2-206ENST00000487091 DAZ4Q86SG3 579 aaKnown RBP12.71□□□□□ -0.37
CLIP2-206ENST00000487091 C11orf52Q96A22 123 aa12.71□□□□□ -0.37
CLIP2-206ENST00000487091 DAZ3Q9NR90 486 aaKnown RBP12.71□□□□□ -0.37
CLIP2-206ENST00000487091 GNG13Q9P2W3 67 aa12.71□□□□□ -0.37
CLIP2-206ENST00000487091 TRBV7-3A0A075B6L6 115 aa12.7□□□□□ -0.38
CLIP2-206ENST00000487091 TEX46H3BTG2 121 aa12.7□□□□□ -0.38
CLIP2-206ENST00000487091 RPL35P42766 123 aaKnown RBP12.7□□□□□ -0.38
CLIP2-206ENST00000487091 RAB4BP61018 213 aa12.7□□□□□ -0.38
CLIP2-206ENST00000487091 NIT1Q86X76 327 aa12.7□□□□□ -0.38
CLIP2-206ENST00000487091 OR10AG1Q8NH19 301 aa12.7□□□□□ -0.38
CLIP2-206ENST00000487091 URGCP-MRPS24S4R325 110 aa12.7□□□□□ -0.38
CLIP2-206ENST00000487091 EPM2AB3EWF7 344 aa12.69□□□□□ -0.38
CLIP2-206ENST00000487091 UBE2D3P61077 147 aa12.69□□□□□ -0.38
CLIP2-206ENST00000487091 UBE2D2P62837 147 aa12.69□□□□□ -0.38
CLIP2-206ENST00000487091 PRR27Q6MZM9 219 aa12.69□□□□□ -0.38
CLIP2-206ENST00000487091 OR10G8Q8NGN5 311 aa12.69□□□□□ -0.38
CLIP2-206ENST00000487091 CHCHD7Q9BUK0 85 aa12.69□□□□□ -0.38
CLIP2-206ENST00000487091 COX11Q9Y6N1 276 aa12.69□□□□□ -0.38
CLIP2-206ENST00000487091 SULT1A2P50226 295 aa12.68□□□□□ -0.38
CLIP2-206ENST00000487091 SPANXN1Q5VSR9 72 aa12.68□□□□□ -0.38
CLIP2-206ENST00000487091 TCTE3Q8IZS6 198 aa12.68□□□□□ -0.38
CLIP2-206ENST00000487091 TMEM70Q9BUB7 260 aa12.67□□□□□ -0.38
CLIP2-206ENST00000487091 DERL1Q9BUN8 251 aa12.67□□□□□ -0.38
CLIP2-206ENST00000487091 ZNF56Q15929 161 aa12.66□□□□□ -0.38
CLIP2-206ENST00000487091 RMI2Q96E14 147 aa12.66□□□□□ -0.38
CLIP2-206ENST00000487091 A0A087WX48 190 aa12.65□□□□□ -0.38
CLIP2-206ENST00000487091 ELOBQ15370 118 aa12.65□□□□□ -0.38
CLIP2-206ENST00000487091 CENPWQ5EE01 88 aa12.65□□□□□ -0.38
CLIP2-206ENST00000487091 NEXN-AS1Q8NBZ9 246 aa12.65□□□□□ -0.38
CLIP2-206ENST00000487091 SMIM12Q96EX1 92 aa12.65□□□□□ -0.38
CLIP2-206ENST00000487091 MUC21A0A0G2JKD1 596 aa12.64□□□□□ -0.39
CLIP2-206ENST00000487091 MUC21A0A140T8X8 626 aa12.64□□□□□ -0.39
CLIP2-206ENST00000487091 IGLV2-8P01709 118 aa12.64□□□□□ -0.39
CLIP2-206ENST00000487091 WFDC2Q14508 124 aa12.64□□□□□ -0.39
CLIP2-206ENST00000487091 KCNIP4Q6PIL6 250 aa12.64□□□□□ -0.39
CLIP2-206ENST00000487091 SLC51BQ86UW2 128 aa12.64□□□□□ -0.39
CLIP2-206ENST00000487091 KLK12Q9UKR0 248 aa12.64□□□□□ -0.39
CLIP2-206ENST00000487091 TRBV6-8A0A0A6YYG3 113 aa12.63□□□□□ -0.39
CLIP2-206ENST00000487091 PDE6DO43924 150 aa12.63□□□□□ -0.39
CLIP2-206ENST00000487091 IFNA1P01562 189 aa12.63□□□□□ -0.39
CLIP2-206ENST00000487091 C1QBP02746 253 aa12.63□□□□□ -0.39
CLIP2-206ENST00000487091 RPS20P60866 119 aaKnown RBP12.63□□□□□ -0.39
CLIP2-206ENST00000487091 MEF2BQ02080 365 aaPredicted RBP12.63□□□□□ -0.39
CLIP2-206ENST00000487091 FRZBQ92765 325 aa12.63□□□□□ -0.39
CLIP2-206ENST00000487091 DAZAP1Q96EP5 407 aaKnown RBP12.63□□□□□ -0.39
CLIP2-206ENST00000487091 KIF25-AS1Q9Y6Z4 181 aa12.63□□□□□ -0.39
CLIP2-206ENST00000487091 FAT1Q14517 4588 aa12.62□□□□□ -0.39
CLIP2-206ENST00000487091 C19orf71A6NCJ1 209 aa12.62□□□□□ -0.39
CLIP2-206ENST00000487091 F5H697 171 aa12.62□□□□□ -0.39
CLIP2-206ENST00000487091 SMIM17P0DL12 118 aa12.62□□□□□ -0.39
CLIP2-206ENST00000487091 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.62□□□□□ -0.39
CLIP2-206ENST00000487091 AP1S3Q96PC3 154 aa12.62□□□□□ -0.39
CLIP2-206ENST00000487091 RAB19A4D1S5 217 aa12.61□□□□□ -0.39
CLIP2-206ENST00000487091 GNG4P50150 75 aa12.61□□□□□ -0.39
CLIP2-206ENST00000487091 Q5VSD8 79 aa12.61□□□□□ -0.39
CLIP2-206ENST00000487091 FER1L6-AS1Q8NA97 138 aa12.61□□□□□ -0.39
CLIP2-206ENST00000487091 OR2D3Q8NGH3 330 aa12.61□□□□□ -0.39
CLIP2-206ENST00000487091 RBFOX3A6NFN3 312 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 300.8 ms