RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 RNF185Q96GF1 192 aa6.8□□□□□ -1.32
COL12A1-208ENST00000486533 USMG5Q96IX5 58 aa6.8□□□□□ -1.32
COL12A1-208ENST00000486533 C16orf92Q96LL3 132 aa6.8□□□□□ -1.32
COL12A1-208ENST00000486533 U3KQE9 123 aa6.8□□□□□ -1.32
COL12A1-208ENST00000486533 TRAV41A0A0B4J266 112 aa6.79□□□□□ -1.32
COL12A1-208ENST00000486533 TRAV21A0A0B4J279 112 aa6.79□□□□□ -1.32
COL12A1-208ENST00000486533 K7EIL1 84 aa6.79□□□□□ -1.32
COL12A1-208ENST00000486533 NDUFA4O00483 81 aa6.79□□□□□ -1.32
COL12A1-208ENST00000486533 SMIM13P0DJ93 91 aa6.79□□□□□ -1.32
COL12A1-208ENST00000486533 ZNF80P51504 273 aaPredicted RBP6.79□□□□□ -1.32
COL12A1-208ENST00000486533 KRTAP10-11P60412 298 aa6.79□□□□□ -1.32
COL12A1-208ENST00000486533 FOXE3Q13461 319 aa6.79□□□□□ -1.32
COL12A1-208ENST00000486533 DEFB136Q30KP8 78 aa6.79□□□□□ -1.32
COL12A1-208ENST00000486533 DEFB121Q5J5C9 76 aa6.79□□□□□ -1.32
COL12A1-208ENST00000486533 MCRIP2Q9BUT9 160 aaKnown RBP6.79□□□□□ -1.32
COL12A1-208ENST00000486533 CST9LQ9H4G1 147 aa6.79□□□□□ -1.32
COL12A1-208ENST00000486533 K7EP34 96 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 M0R381 172 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 CCL24O00175 119 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 IGHG4P01861 327 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 ELANEP08246 267 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 FABP2P12104 132 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 EGFEM1PQ0D2K5 195 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 ODF1Q14990 250 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 RAX2Q96IS3 184 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 CCDC140Q96MF4 163 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 C20orf78Q9BR46 151 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 AGPAT4-IT1Q9H0P7 198 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 ZMAT4Q9H898 229 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 DNAH3Q8TD57 4116 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 TRAV12-1A0A0B4J245 112 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 A0A0G2JLM5 398 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 SMKR1H3BMG3 65 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 IGF1P05019 195 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 ARL3P36405 182 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 ASIPP42127 132 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 PCP4P48539 62 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 ERCC8Q13216 396 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 COTL1Q14019 142 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 OCIAD2Q56VL3 154 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 ERASQ7Z444 233 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 UFC1Q9Y3C8 167 aa6.78□□□□□ -1.32
COL12A1-208ENST00000486533 GAGE12BA1L429 117 aa6.77□□□□□ -1.33
COL12A1-208ENST00000486533 LINC01619G3V211 115 aa6.77□□□□□ -1.33
COL12A1-208ENST00000486533 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.77□□□□□ -1.33
COL12A1-208ENST00000486533 TRGV3P03979 118 aa6.77□□□□□ -1.33
COL12A1-208ENST00000486533 SMIM17P0DL12 118 aa6.77□□□□□ -1.33
COL12A1-208ENST00000486533 S100A4P26447 101 aaKnown RBP6.77□□□□□ -1.33
COL12A1-208ENST00000486533 HLA-DMBP28068 263 aa6.77□□□□□ -1.33
COL12A1-208ENST00000486533 RBX1P62877 108 aa6.77□□□□□ -1.33
COL12A1-208ENST00000486533 CFHR3Q02985 330 aa6.77□□□□□ -1.33
COL12A1-208ENST00000486533 FAM106AQ4KMX7 169 aa6.77□□□□□ -1.33
COL12A1-208ENST00000486533 ADAMTSL5Q6ZMM2 481 aa6.77□□□□□ -1.33
COL12A1-208ENST00000486533 RNF152Q8N8N0 203 aa6.77□□□□□ -1.33
COL12A1-208ENST00000486533 RNASE8Q8TDE3 154 aaKnown RBP6.77□□□□□ -1.33
COL12A1-208ENST00000486533 C4orf3Q8WVX3 66 aa6.77□□□□□ -1.33
COL12A1-208ENST00000486533 VPS25Q9BRG1 176 aa6.77□□□□□ -1.33
COL12A1-208ENST00000486533 DPH3P1Q9H4G8 78 aa6.77□□□□□ -1.33
COL12A1-208ENST00000486533 A0A087WX48 190 aa6.76□□□□□ -1.33
COL12A1-208ENST00000486533 G3V318 75 aa6.76□□□□□ -1.33
COL12A1-208ENST00000486533 ZNF207O43670 478 aaKnown RBP6.76□□□□□ -1.33
COL12A1-208ENST00000486533 PSMB8P28062 276 aa6.76□□□□□ -1.33
COL12A1-208ENST00000486533 ID1P41134 155 aa6.76□□□□□ -1.33
COL12A1-208ENST00000486533 PAPPA-AS1Q5QFB9 102 aa6.76□□□□□ -1.33
COL12A1-208ENST00000486533 RNF182Q8N6D2 247 aa6.76□□□□□ -1.33
COL12A1-208ENST00000486533 GLMPQ8WWB7 406 aa6.76□□□□□ -1.33
COL12A1-208ENST00000486533 C18orf15Q96N68 181 aa6.76□□□□□ -1.33
COL12A1-208ENST00000486533 CHAC1Q9BUX1 264 aa6.76□□□□□ -1.33
COL12A1-208ENST00000486533 SMIM2Q9BVW6 85 aa6.76□□□□□ -1.33
COL12A1-208ENST00000486533 ZNF580Q9UK33 172 aa6.76□□□□□ -1.33
COL12A1-208ENST00000486533 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
COL12A1-208ENST00000486533 TRAV8-6A0A0B4J262 113 aa6.75□□□□□ -1.33
COL12A1-208ENST00000486533 IGKV3D-20A0A0C4DH25 116 aa6.75□□□□□ -1.33
COL12A1-208ENST00000486533 A0A1W2PPM0 123 aa6.75□□□□□ -1.33
COL12A1-208ENST00000486533 PRAC2D3DTV9 90 aa6.75□□□□□ -1.33
COL12A1-208ENST00000486533 H7C1H1 209 aa6.75□□□□□ -1.33
COL12A1-208ENST00000486533 Q6ZVH6 145 aa6.75□□□□□ -1.33
COL12A1-208ENST00000486533 OR11H1Q8NG94 326 aa6.75□□□□□ -1.33
COL12A1-208ENST00000486533 KLK15Q9H2R5 256 aa6.75□□□□□ -1.33
COL12A1-208ENST00000486533 PHLDA3Q9Y5J5 127 aa6.75□□□□□ -1.33
COL12A1-208ENST00000486533 IGLV2-18A0A075B6J9 118 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 IGHV3-35A0A0C4DH35 117 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 IGHV7-4-1A0A0J9YVY3 117 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 F8VRH5 84 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 H3BUT2 72 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 PPIFP30405 207 aaKnown RBP6.74□□□□□ -1.33
COL12A1-208ENST00000486533 RPL32P62910 135 aaKnown RBP6.74□□□□□ -1.33
COL12A1-208ENST00000486533 RNF151Q2KHN1 245 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 C19orf54Q5BKX5 351 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 C9orf66Q5T8R8 295 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 IGFL4Q6B9Z1 124 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 UFSP1Q6NVU6 142 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 NRACQ8N912 160 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 UBE2E2Q96LR5 201 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 MSRB1Q9NZV6 116 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 DKK2Q9UBU2 259 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 SPCS1Q9Y6A9 102 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 TENM3Q9P273 2699 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 TMEM238LA0A1B0GVL6 79 aa6.74□□□□□ -1.33
COL12A1-208ENST00000486533 OR11H12B2RN74 326 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms