RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 DAZAP1Q96EP5 407 aaKnown RBP8.91□□□□□ -0.98
SSR4-211ENST00000486204 SFRP2Q96HF1 295 aa8.91□□□□□ -0.98
SSR4-211ENST00000486204 LINC00588Q9Y4M8 146 aa8.91□□□□□ -0.98
SSR4-211ENST00000486204 ICOSQ9Y6W8 199 aa8.91□□□□□ -0.98
SSR4-211ENST00000486204 LOC100131303A0A0U1RQF7 123 aa8.9□□□□□ -0.98
SSR4-211ENST00000486204 TRBV6-4A0A1B0GX49 114 aa8.9□□□□□ -0.98
SSR4-211ENST00000486204 ZNF727A8MUV8 499 aa8.9□□□□□ -0.98
SSR4-211ENST00000486204 CRYGDP07320 174 aa8.9□□□□□ -0.98
SSR4-211ENST00000486204 RPS20P60866 119 aaKnown RBP8.9□□□□□ -0.98
SSR4-211ENST00000486204 ESRGQ1W209 222 aa8.9□□□□□ -0.98
SSR4-211ENST00000486204 ZFP2Q6ZN57 461 aa8.9□□□□□ -0.98
SSR4-211ENST00000486204 Q6ZSN1 163 aa8.9□□□□□ -0.98
SSR4-211ENST00000486204 FAM231DQ6ZW35 169 aa8.9□□□□□ -0.98
SSR4-211ENST00000486204 SLC25A29Q8N8R3 303 aa8.9□□□□□ -0.98
SSR4-211ENST00000486204 SMDT1Q9H4I9 107 aa8.9□□□□□ -0.98
SSR4-211ENST00000486204 K7EQD1 137 aa8.89□□□□□ -0.99
SSR4-211ENST00000486204 GYPEP15421 78 aa8.89□□□□□ -0.99
SSR4-211ENST00000486204 PEA15Q15121 130 aa8.89□□□□□ -0.99
SSR4-211ENST00000486204 CLLU1Q5K131 121 aa8.89□□□□□ -0.99
SSR4-211ENST00000486204 FER1L6-AS1Q8NA97 138 aa8.89□□□□□ -0.99
SSR4-211ENST00000486204 ZNRF2Q8NHG8 242 aa8.89□□□□□ -0.99
SSR4-211ENST00000486204 RPP21Q9H633 154 aaKnown RBP8.89□□□□□ -0.99
SSR4-211ENST00000486204 MUC21A0A0G2JKD1 596 aa8.88□□□□□ -0.99
SSR4-211ENST00000486204 MUC21A0A140T8X8 626 aa8.88□□□□□ -0.99
SSR4-211ENST00000486204 C16orf90A8MZG2 172 aa8.88□□□□□ -0.99
SSR4-211ENST00000486204 RHODO00212 210 aa8.88□□□□□ -0.99
SSR4-211ENST00000486204 CTRLP40313 264 aa8.88□□□□□ -0.99
SSR4-211ENST00000486204 CCL18P55774 89 aa8.88□□□□□ -0.99
SSR4-211ENST00000486204 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
SSR4-211ENST00000486204 RHOHQ15669 191 aa8.88□□□□□ -0.99
SSR4-211ENST00000486204 MRPL23Q16540 153 aaKnown RBP8.88□□□□□ -0.99
SSR4-211ENST00000486204 APOBP04114 4563 aaKnown RBP8.88□□□□□ -0.99
SSR4-211ENST00000486204 A0A087WWL8 130 aa8.87□□□□□ -0.99
SSR4-211ENST00000486204 LINC00694P0DN24 101 aa8.87□□□□□ -0.99
SSR4-211ENST00000486204 FAM74A3Q4VXF1 159 aa8.87□□□□□ -0.99
SSR4-211ENST00000486204 FAM74A4Q5TZK3 123 aa8.87□□□□□ -0.99
SSR4-211ENST00000486204 UPK3BQ9BT76 320 aa8.87□□□□□ -0.99
SSR4-211ENST00000486204 Q9UF83 564 aa8.87□□□□□ -0.99
SSR4-211ENST00000486204 MRPS16Q9Y3D3 137 aaKnown RBP8.87□□□□□ -0.99
SSR4-211ENST00000486204 KIF25-AS1Q9Y6Z4 181 aa8.87□□□□□ -0.99
SSR4-211ENST00000486204 XKRY2A2RUG3 117 aa8.86□□□□□ -0.99
SSR4-211ENST00000486204 SRIP30626 198 aa8.86□□□□□ -0.99
SSR4-211ENST00000486204 RAB14P61106 215 aa8.86□□□□□ -0.99
SSR4-211ENST00000486204 RPL23P62829 140 aaKnown RBP8.86□□□□□ -0.99
SSR4-211ENST00000486204 SPANXN1Q5VSR9 72 aa8.86□□□□□ -0.99
SSR4-211ENST00000486204 LYPD5Q6UWN5 251 aa8.86□□□□□ -0.99
SSR4-211ENST00000486204 Q6ZR54 194 aa8.86□□□□□ -0.99
SSR4-211ENST00000486204 NEGR1Q7Z3B1 354 aa8.86□□□□□ -0.99
SSR4-211ENST00000486204 C14orf178Q8N769 122 aaPredicted RBP8.86□□□□□ -0.99
SSR4-211ENST00000486204 GTSF1Q8WW33 167 aa8.86□□□□□ -0.99
SSR4-211ENST00000486204 CNFNQ9BYD5 112 aa8.86□□□□□ -0.99
SSR4-211ENST00000486204 MSRB1Q9NZV6 116 aa8.86□□□□□ -0.99
SSR4-211ENST00000486204 IGLV2-18A0A075B6J9 118 aa8.85□□□□□ -0.99
SSR4-211ENST00000486204 A0A1W2PPQ1 181 aa8.85□□□□□ -0.99
SSR4-211ENST00000486204 GATCO43716 136 aaKnown RBP8.85□□□□□ -0.99
SSR4-211ENST00000486204 LINC00315P59091 139 aa8.85□□□□□ -0.99
SSR4-211ENST00000486204 ERVFC1-1P60608 527 aa8.85□□□□□ -0.99
SSR4-211ENST00000486204 TMEM241Q24JQ0 296 aa8.85□□□□□ -0.99
SSR4-211ENST00000486204 CT83Q5H943 113 aa8.85□□□□□ -0.99
SSR4-211ENST00000486204 SOHLH1Q5JUK2 328 aa8.85□□□□□ -0.99
SSR4-211ENST00000486204 LYZL1Q6UWQ5 148 aa8.85□□□□□ -0.99
SSR4-211ENST00000486204 ISOC2Q96AB3 205 aa8.85□□□□□ -0.99
SSR4-211ENST00000486204 PRADC1Q9BSG0 188 aa8.85□□□□□ -0.99
SSR4-211ENST00000486204 TPPP3Q9BW30 176 aa8.85□□□□□ -0.99
SSR4-211ENST00000486204 OSTCQ9NRP0 149 aa8.85□□□□□ -0.99
SSR4-211ENST00000486204 F2Z2F3 143 aa8.84□□□□□ -0.99
SSR4-211ENST00000486204 SSTP61278 116 aa8.84□□□□□ -0.99
SSR4-211ENST00000486204 CACNG7P62955 275 aa8.84□□□□□ -0.99
SSR4-211ENST00000486204 AP1S3Q96PC3 154 aa8.84□□□□□ -0.99
SSR4-211ENST00000486204 NAT8Q9UHE5 227 aa8.84□□□□□ -0.99
SSR4-211ENST00000486204 DNAH5Q8TE73 4624 aa8.84□□□□□ -1
SSR4-211ENST00000486204 WDR73Q6P4I2 378 aa8.83□□□□□ -1
SSR4-211ENST00000486204 V9GYV3 84 aa8.83□□□□□ -1
SSR4-211ENST00000486204 UBR4Q5T4S7 5183 aa8.82□□□□□ -1
SSR4-211ENST00000486204 A8MWL6 223 aa8.82□□□□□ -1
SSR4-211ENST00000486204 NTF3P20783 257 aa8.82□□□□□ -1
SSR4-211ENST00000486204 FOXA3P55318 350 aaPredicted RBP8.82□□□□□ -1
SSR4-211ENST00000486204 TIRAPP58753 221 aa8.82□□□□□ -1
SSR4-211ENST00000486204 RAB4BP61018 213 aa8.82□□□□□ -1
SSR4-211ENST00000486204 ADIRFQ15847 76 aa8.82□□□□□ -1
SSR4-211ENST00000486204 ZNF56Q15929 161 aa8.82□□□□□ -1
SSR4-211ENST00000486204 SH2D6Q7Z4S9 175 aa8.82□□□□□ -1
SSR4-211ENST00000486204 KRTAP1-5Q9BYS1 174 aa8.82□□□□□ -1
SSR4-211ENST00000486204 NBDYA0A0U1RRE5 68 aa8.81□□□□□ -1
SSR4-211ENST00000486204 GAGE12JA6NER3 117 aa8.81□□□□□ -1
SSR4-211ENST00000486204 GAGE1Q13065 139 aa8.81□□□□□ -1
SSR4-211ENST00000486204 GAGE4Q13068 117 aa8.81□□□□□ -1
SSR4-211ENST00000486204 GAGE5Q13069 117 aa8.81□□□□□ -1
SSR4-211ENST00000486204 GAGE13Q4V321 117 aa8.81□□□□□ -1
SSR4-211ENST00000486204 TSKUQ8WUA8 353 aa8.81□□□□□ -1
SSR4-211ENST00000486204 Q9H8V8 135 aa8.81□□□□□ -1
SSR4-211ENST00000486204 TRBV10-1A0A0K0K1A3 114 aa8.8□□□□□ -1
SSR4-211ENST00000486204 EVI2AP22794 236 aa8.8□□□□□ -1
SSR4-211ENST00000486204 C1orf134Q5TEV5 83 aa8.8□□□□□ -1
SSR4-211ENST00000486204 WFDC10BQ8IUB3 73 aa8.8□□□□□ -1
SSR4-211ENST00000486204 ATP6V0E2Q8NHE4 81 aa8.8□□□□□ -1
SSR4-211ENST00000486204 GFRA4Q9GZZ7 299 aa8.8□□□□□ -1
SSR4-211ENST00000486204 FAM231BA6NCW3 169 aa8.79□□□□□ -1
SSR4-211ENST00000486204 HIGD1CA8MV81 97 aa8.79□□□□□ -1
SSR4-211ENST00000486204 SIVA1O15304 175 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms