RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 AP1S3Q96PC3 154 aa6.47□□□□□ -1.37
SHROOM4-204ENST00000483955 NOP10Q9NPE3 64 aaKnown RBP6.47□□□□□ -1.37
SHROOM4-204ENST00000483955 MGAM2Q2M2H8 2515 aa6.46□□□□□ -1.37
SHROOM4-204ENST00000483955 TRGV1A0A0A0MS02 117 aa6.46□□□□□ -1.38
SHROOM4-204ENST00000483955 A8MWV9 139 aa6.46□□□□□ -1.38
SHROOM4-204ENST00000483955 H0Y8G0 127 aa6.46□□□□□ -1.38
SHROOM4-204ENST00000483955 CAMPP49913 170 aa6.46□□□□□ -1.38
SHROOM4-204ENST00000483955 FAM3BP58499 235 aaPredicted RBP6.46□□□□□ -1.38
SHROOM4-204ENST00000483955 FAM222AQ5U5X8 452 aa6.46□□□□□ -1.38
SHROOM4-204ENST00000483955 RASL11AQ6T310 242 aa6.46□□□□□ -1.38
SHROOM4-204ENST00000483955 OR10AG1Q8NH19 301 aa6.46□□□□□ -1.38
SHROOM4-204ENST00000483955 C18orf15Q96N68 181 aa6.46□□□□□ -1.38
SHROOM4-204ENST00000483955 DKK2Q9UBU2 259 aa6.46□□□□□ -1.38
SHROOM4-204ENST00000483955 URGCP-MRPS24S4R325 110 aa6.46□□□□□ -1.38
SHROOM4-204ENST00000483955 TRGV2A0A075B6R0 118 aa6.45□□□□□ -1.38
SHROOM4-204ENST00000483955 A0A0J9YWU9 116 aa6.45□□□□□ -1.38
SHROOM4-204ENST00000483955 CIDEAO60543 219 aa6.45□□□□□ -1.38
SHROOM4-204ENST00000483955 SMIM17P0DL12 118 aa6.45□□□□□ -1.38
SHROOM4-204ENST00000483955 NTF3P20783 257 aa6.45□□□□□ -1.38
SHROOM4-204ENST00000483955 HBBP68871 147 aa6.45□□□□□ -1.38
SHROOM4-204ENST00000483955 TWIST1Q15672 202 aa6.45□□□□□ -1.38
SHROOM4-204ENST00000483955 COX19Q49B96 90 aa6.45□□□□□ -1.38
SHROOM4-204ENST00000483955 MRPL54Q6P161 138 aaKnown RBP6.45□□□□□ -1.38
SHROOM4-204ENST00000483955 LINC00612Q8N6U2 182 aa6.45□□□□□ -1.38
SHROOM4-204ENST00000483955 MRPL16Q9NX20 251 aaKnown RBP6.45□□□□□ -1.38
SHROOM4-204ENST00000483955 TRBV24-1A0A075B6N3 115 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 TRAV4A0A0B4J268 109 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 A0A1B0GXF2 115 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 GAGE12BA1L429 117 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 RHODO00212 210 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 DEFB4AO15263 64 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 GAGE7O76087 117 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 S100A6P06703 90 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 GAGE12FP0CL80 117 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 GAGE12GP0CL81 117 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 GAGE12IP0CL82 117 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 DAD1P61803 113 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 ELOBQ15370 118 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 TMEM88Q6PEY1 159 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 Q6ZTI0 123 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 CBLN2Q8IUK8 224 aa6.44□□□□□ -1.38
SHROOM4-204ENST00000483955 MUC21A0A0G2JKD1 596 aa6.43□□□□□ -1.38
SHROOM4-204ENST00000483955 MUC21A0A140T8X8 626 aa6.43□□□□□ -1.38
SHROOM4-204ENST00000483955 F8WDY8 70 aa6.43□□□□□ -1.38
SHROOM4-204ENST00000483955 SSTP61278 116 aa6.43□□□□□ -1.38
SHROOM4-204ENST00000483955 LINC00469Q8N7U9 141 aa6.43□□□□□ -1.38
SHROOM4-204ENST00000483955 GATD1Q8NB37 220 aa6.43□□□□□ -1.38
SHROOM4-204ENST00000483955 OR4C5Q8NGB2 326 aa6.43□□□□□ -1.38
SHROOM4-204ENST00000483955 TMEM191AQ9H0A3 160 aa6.43□□□□□ -1.38
SHROOM4-204ENST00000483955 DPH3P1Q9H4G8 78 aa6.43□□□□□ -1.38
SHROOM4-204ENST00000483955 CELA1Q9UNI1 258 aa6.43□□□□□ -1.38
SHROOM4-204ENST00000483955 U3KQK5 164 aa6.43□□□□□ -1.38
SHROOM4-204ENST00000483955 RS1O15537 224 aa6.42□□□□□ -1.38
SHROOM4-204ENST00000483955 HLA-DQA1P01909 254 aa6.42□□□□□ -1.38
SHROOM4-204ENST00000483955 MT-ND6P03923 174 aa6.42□□□□□ -1.38
SHROOM4-204ENST00000483955 DEFB130BP0DP73 79 aa6.42□□□□□ -1.38
SHROOM4-204ENST00000483955 DEFB130AP0DP74 79 aa6.42□□□□□ -1.38
SHROOM4-204ENST00000483955 CFAP126Q5VTH2 177 aa6.42□□□□□ -1.38
SHROOM4-204ENST00000483955 ZFP2Q6ZN57 461 aa6.42□□□□□ -1.38
SHROOM4-204ENST00000483955 C11orf45Q8TAV5 145 aa6.42□□□□□ -1.38
SHROOM4-204ENST00000483955 FAM210BQ96KR6 192 aa6.42□□□□□ -1.38
SHROOM4-204ENST00000483955 TGIF2-C20orf24A0A0A6YYL0 155 aa6.41□□□□□ -1.38
SHROOM4-204ENST00000483955 SCO1O75880 301 aa6.41□□□□□ -1.38
SHROOM4-204ENST00000483955 ATP5G1P05496 136 aa6.41□□□□□ -1.38
SHROOM4-204ENST00000483955 EVI2AP22794 236 aa6.41□□□□□ -1.38
SHROOM4-204ENST00000483955 RAB4BP61018 213 aa6.41□□□□□ -1.38
SHROOM4-204ENST00000483955 FAM74A4Q5TZK3 123 aa6.41□□□□□ -1.38
SHROOM4-204ENST00000483955 C14orf178Q8N769 122 aaPredicted RBP6.41□□□□□ -1.38
SHROOM4-204ENST00000483955 FRZBQ92765 325 aa6.41□□□□□ -1.38
SHROOM4-204ENST00000483955 YPEL4Q96NS1 127 aa6.41□□□□□ -1.38
SHROOM4-204ENST00000483955 GNB1LQ9BYB4 327 aa6.41□□□□□ -1.38
SHROOM4-204ENST00000483955 MSRB1Q9NZV6 116 aa6.41□□□□□ -1.38
SHROOM4-204ENST00000483955 HUWE1Q7Z6Z7 4374 aaKnown RBP6.4□□□□□ -1.38
SHROOM4-204ENST00000483955 CRYGDP07320 174 aa6.4□□□□□ -1.38
SHROOM4-204ENST00000483955 MGPP08493 103 aa6.4□□□□□ -1.38
SHROOM4-204ENST00000483955 CTAG1AP78358 180 aa6.4□□□□□ -1.38
SHROOM4-204ENST00000483955 SLAQ13239 276 aa6.4□□□□□ -1.38
SHROOM4-204ENST00000483955 ZNF56Q15929 161 aa6.4□□□□□ -1.38
SHROOM4-204ENST00000483955 C12orf74Q32Q52 190 aa6.4□□□□□ -1.38
SHROOM4-204ENST00000483955 FAM104BQ5XKR9 115 aa6.4□□□□□ -1.38
SHROOM4-204ENST00000483955 JPT2Q9H910 190 aa6.4□□□□□ -1.38
SHROOM4-204ENST00000483955 EDA2RQ9HAV5 297 aa6.4□□□□□ -1.38
SHROOM4-204ENST00000483955 KIF25-AS1Q9Y6Z4 181 aa6.4□□□□□ -1.38
SHROOM4-204ENST00000483955 NOTCH1P46531 2555 aa6.4□□□□□ -1.39
SHROOM4-204ENST00000483955 MUC4Q99102 2169 aa6.4□□□□□ -1.39
SHROOM4-204ENST00000483955 DNAH9Q9NYC9 4486 aa6.39□□□□□ -1.39
SHROOM4-204ENST00000483955 TRGV4A0A0C4DH28 118 aa6.39□□□□□ -1.39
SHROOM4-204ENST00000483955 H7C1H1 209 aa6.39□□□□□ -1.39
SHROOM4-204ENST00000483955 IGHV3-53P01767 116 aa6.39□□□□□ -1.39
SHROOM4-204ENST00000483955 UFSP1Q6NVU6 142 aa6.39□□□□□ -1.39
SHROOM4-204ENST00000483955 CDPF1Q6NVV7 123 aa6.39□□□□□ -1.39
SHROOM4-204ENST00000483955 TMEM136Q6ZRR5 245 aa6.39□□□□□ -1.39
SHROOM4-204ENST00000483955 AMN1Q8IY45 258 aa6.39□□□□□ -1.39
SHROOM4-204ENST00000483955 POM121L12Q8N7R1 296 aa6.39□□□□□ -1.39
SHROOM4-204ENST00000483955 MRAP2Q96G30 205 aa6.39□□□□□ -1.39
SHROOM4-204ENST00000483955 ZNF479Q96JC4 524 aa6.39□□□□□ -1.39
SHROOM4-204ENST00000483955 SAMD10Q9BYL1 202 aa6.39□□□□□ -1.39
SHROOM4-204ENST00000483955 TRAV10A0A0B4J240 114 aa6.38□□□□□ -1.39
SHROOM4-204ENST00000483955 F5H697 171 aa6.38□□□□□ -1.39
SHROOM4-204ENST00000483955 PPBPP02775 128 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms