RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 CXorf1O96002 111 aa7.28□□□□□ -1.24
TTC28-206ENST00000480563 RNASE3P12724 160 aaKnown RBP7.28□□□□□ -1.24
TTC28-206ENST00000480563 ZNF80P51504 273 aaPredicted RBP7.28□□□□□ -1.24
TTC28-206ENST00000480563 FGF8P55075 233 aaPredicted RBP7.28□□□□□ -1.24
TTC28-206ENST00000480563 ELOBQ15370 118 aa7.28□□□□□ -1.24
TTC28-206ENST00000480563 ARL6IP6Q8N6S5 226 aa7.28□□□□□ -1.24
TTC28-206ENST00000480563 STOML3Q8TAV4 291 aa7.28□□□□□ -1.24
TTC28-206ENST00000480563 SGK494Q96LW2 274 aa7.28□□□□□ -1.24
TTC28-206ENST00000480563 CYTL1Q9NRR1 136 aa7.28□□□□□ -1.24
TTC28-206ENST00000480563 TMEM167BQ9NRX6 74 aa7.28□□□□□ -1.24
TTC28-206ENST00000480563 A8MWV9 139 aa7.27□□□□□ -1.25
TTC28-206ENST00000480563 STAG3L2P0CL84 134 aa7.27□□□□□ -1.25
TTC28-206ENST00000480563 STAG3L3P0CL85 134 aa7.27□□□□□ -1.25
TTC28-206ENST00000480563 ARL14EPLP0DKL9 152 aa7.27□□□□□ -1.25
TTC28-206ENST00000480563 ASIPP42127 132 aa7.27□□□□□ -1.25
TTC28-206ENST00000480563 GNG5P63218 68 aa7.27□□□□□ -1.25
TTC28-206ENST00000480563 C14orf178Q8N769 122 aaPredicted RBP7.27□□□□□ -1.25
TTC28-206ENST00000480563 TMEM75Q8N9X5 138 aa7.27□□□□□ -1.25
TTC28-206ENST00000480563 RAB24Q969Q5 203 aa7.27□□□□□ -1.25
TTC28-206ENST00000480563 LINC00479Q96M42 142 aa7.27□□□□□ -1.25
TTC28-206ENST00000480563 NDFIP1Q9BT67 221 aa7.27□□□□□ -1.25
TTC28-206ENST00000480563 HMGB3O15347 200 aaKnown RBP7.26□□□□□ -1.25
TTC28-206ENST00000480563 GCGP01275 180 aa7.26□□□□□ -1.25
TTC28-206ENST00000480563 Q0VG73 95 aa7.26□□□□□ -1.25
TTC28-206ENST00000480563 LGALSLQ3ZCW2 172 aaPredicted RBP7.26□□□□□ -1.25
TTC28-206ENST00000480563 DMRTA1Q5VZB9 504 aa7.26□□□□□ -1.25
TTC28-206ENST00000480563 KCNIP4Q6PIL6 250 aa7.26□□□□□ -1.25
TTC28-206ENST00000480563 CHCHD7Q9BUK0 85 aa7.26□□□□□ -1.25
TTC28-206ENST00000480563 C1orf43Q9BWL3 253 aa7.26□□□□□ -1.25
TTC28-206ENST00000480563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.26□□□□□ -1.25
TTC28-206ENST00000480563 MAP1LC3B2A6NCE7 125 aa7.25□□□□□ -1.25
TTC28-206ENST00000480563 TEX46H3BTG2 121 aa7.25□□□□□ -1.25
TTC28-206ENST00000480563 PANO1I0J062 215 aa7.25□□□□□ -1.25
TTC28-206ENST00000480563 K7EQM0 130 aa7.25□□□□□ -1.25
TTC28-206ENST00000480563 GCHFRP30047 84 aa7.25□□□□□ -1.25
TTC28-206ENST00000480563 DGAT2L7PQ6IED9 249 aa7.25□□□□□ -1.25
TTC28-206ENST00000480563 SLC51BQ86UW2 128 aa7.25□□□□□ -1.25
TTC28-206ENST00000480563 C9orf163Q8N9P6 203 aa7.25□□□□□ -1.25
TTC28-206ENST00000480563 MAP1LC3BQ9GZQ8 125 aa7.25□□□□□ -1.25
TTC28-206ENST00000480563 JPT2Q9H910 190 aa7.25□□□□□ -1.25
TTC28-206ENST00000480563 SERTM2A0A1B0GWG4 89 aa7.24□□□□□ -1.25
TTC28-206ENST00000480563 USP17L23D6RBM5 183 aa7.24□□□□□ -1.25
TTC28-206ENST00000480563 PRSS1P07477 247 aa7.24□□□□□ -1.25
TTC28-206ENST00000480563 S100A4P26447 101 aaKnown RBP7.24□□□□□ -1.25
TTC28-206ENST00000480563 RAB5CP51148 216 aa7.24□□□□□ -1.25
TTC28-206ENST00000480563 PIK3CD-AS1Q5SR53 167 aa7.24□□□□□ -1.25
TTC28-206ENST00000480563 UFSP1Q6NVU6 142 aa7.24□□□□□ -1.25
TTC28-206ENST00000480563 ENHOQ6UWT2 76 aa7.24□□□□□ -1.25
TTC28-206ENST00000480563 FAM213BQ8TBF2 198 aa7.24□□□□□ -1.25
TTC28-206ENST00000480563 ZC2HC1AQ96GY0 325 aa7.24□□□□□ -1.25
TTC28-206ENST00000480563 A0A1B0GVG6 124 aa7.23□□□□□ -1.25
TTC28-206ENST00000480563 TMEM262E9PQX1 116 aa7.23□□□□□ -1.25
TTC28-206ENST00000480563 SMUG1Q53HV7 270 aa7.23□□□□□ -1.25
TTC28-206ENST00000480563 SDIM1Q6ZPB5 146 aa7.23□□□□□ -1.25
TTC28-206ENST00000480563 C9orf62Q8N4C0 152 aa7.23□□□□□ -1.25
TTC28-206ENST00000480563 C5orf17Q8NAS9 161 aa7.23□□□□□ -1.25
TTC28-206ENST00000480563 NKX6-2Q9C056 277 aaPredicted RBP7.23□□□□□ -1.25
TTC28-206ENST00000480563 DPH3P1Q9H4G8 78 aa7.23□□□□□ -1.25
TTC28-206ENST00000480563 PSG8Q9UQ74 426 aa7.23□□□□□ -1.25
TTC28-206ENST00000480563 TNXBP22105 4242 aa7.23□□□□□ -1.25
TTC28-206ENST00000480563 IGKV3D-20A0A0C4DH25 116 aa7.22□□□□□ -1.25
TTC28-206ENST00000480563 CRPP02741 224 aa7.22□□□□□ -1.25
TTC28-206ENST00000480563 TCRAP04437 139 aa7.22□□□□□ -1.25
TTC28-206ENST00000480563 A0A1W2PRE2 83 aa7.21□□□□□ -1.26
TTC28-206ENST00000480563 RHODO00212 210 aa7.21□□□□□ -1.26
TTC28-206ENST00000480563 IFNA7P01567 189 aa7.21□□□□□ -1.26
TTC28-206ENST00000480563 HLA-DQA1P01909 254 aa7.21□□□□□ -1.26
TTC28-206ENST00000480563 H2AFB1P0C5Y9 115 aa7.21□□□□□ -1.26
TTC28-206ENST00000480563 ZNF726P1Q15940 193 aa7.21□□□□□ -1.26
TTC28-206ENST00000480563 PRNTQ86SH4 94 aa7.21□□□□□ -1.26
TTC28-206ENST00000480563 C15orf54Q8N8G6 183 aa7.21□□□□□ -1.26
TTC28-206ENST00000480563 SUN5Q8TC36 379 aa7.21□□□□□ -1.26
TTC28-206ENST00000480563 SFT2D1Q8WV19 159 aa7.21□□□□□ -1.26
TTC28-206ENST00000480563 TCEAL7Q9BRU2 100 aa7.21□□□□□ -1.26
TTC28-206ENST00000480563 ARL2-SNX15V9GYD0 113 aa7.21□□□□□ -1.26
TTC28-206ENST00000480563 UBE2G2P60604 165 aa7.2□□□□□ -1.26
TTC28-206ENST00000480563 RPL19P84098 196 aaKnown RBP7.2□□□□□ -1.26
TTC28-206ENST00000480563 FLI1Q01543 452 aaPredicted RBP7.2□□□□□ -1.26
TTC28-206ENST00000480563 SAPCD1Q5SSQ6 148 aa7.2□□□□□ -1.26
TTC28-206ENST00000480563 FAM74A4Q5TZK3 123 aa7.2□□□□□ -1.26
TTC28-206ENST00000480563 DPH3Q96FX2 82 aa7.2□□□□□ -1.26
TTC28-206ENST00000480563 IL36BQ9NZH7 164 aa7.2□□□□□ -1.26
TTC28-206ENST00000480563 IFNA1P01562 189 aa7.19□□□□□ -1.26
TTC28-206ENST00000480563 ANGP03950 147 aaKnown RBP7.19□□□□□ -1.26
TTC28-206ENST00000480563 SULT1A2P50226 295 aa7.19□□□□□ -1.26
TTC28-206ENST00000480563 UBE2D3P61077 147 aa7.19□□□□□ -1.26
TTC28-206ENST00000480563 UBE2D2P62837 147 aa7.19□□□□□ -1.26
TTC28-206ENST00000480563 RPL36AP83881 106 aaKnown RBP7.19□□□□□ -1.26
TTC28-206ENST00000480563 CIRBPQ14011 172 aaKnown RBP7.19□□□□□ -1.26
TTC28-206ENST00000480563 ODF1Q14990 250 aa7.19□□□□□ -1.26
TTC28-206ENST00000480563 MIAQ16674 131 aa7.19□□□□□ -1.26
TTC28-206ENST00000480563 CST9LP1Q5W188 147 aa7.19□□□□□ -1.26
TTC28-206ENST00000480563 MBD3L1Q8WWY6 194 aa7.19□□□□□ -1.26
TTC28-206ENST00000480563 RPL36ALQ969Q0 106 aaKnown RBP7.19□□□□□ -1.26
TTC28-206ENST00000480563 TRBV7-3A0A075B6L6 115 aa7.18□□□□□ -1.26
TTC28-206ENST00000480563 A0A087WWL8 130 aa7.18□□□□□ -1.26
TTC28-206ENST00000480563 TRBV6-8A0A0A6YYG3 113 aa7.18□□□□□ -1.26
TTC28-206ENST00000480563 A0A1B0GV50 99 aa7.18□□□□□ -1.26
TTC28-206ENST00000480563 FABP5P3A8MUU1 101 aa7.18□□□□□ -1.26
TTC28-206ENST00000480563 H3BVH4 76 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms