RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	C15orf54	Q8N8G6	183 aa		12.52	□□□□□ -0.4
RFK-204	ENST00000479197	ICOS	Q9Y6W8	199 aa		12.52	□□□□□ -0.4
RFK-204	ENST00000479197		A0A087WWL8	130 aa		12.52	□□□□□ -0.41
RFK-204	ENST00000479197		A0A096LPF7	62 aa		12.52	□□□□□ -0.41
RFK-204	ENST00000479197		A8MWL6	223 aa		12.52	□□□□□ -0.41
RFK-204	ENST00000479197	CTRL	P40313	264 aa		12.52	□□□□□ -0.41
RFK-204	ENST00000479197	CACNG7	P62955	275 aa		12.52	□□□□□ -0.41
RFK-204	ENST00000479197	SLC25A29	Q8N8R3	303 aa		12.52	□□□□□ -0.41
RFK-204	ENST00000479197	TRBV6-4	A0A1B0GX49	114 aa		12.51	□□□□□ -0.41
RFK-204	ENST00000479197	CRYGD	P07320	174 aa		12.51	□□□□□ -0.41
RFK-204	ENST00000479197	RYR3	Q15413	4870 aa		12.51	□□□□□ -0.41
RFK-204	ENST00000479197	GTSF1	Q8WW33	167 aa		12.51	□□□□□ -0.41
RFK-204	ENST00000479197	GYPE	P15421	78 aa		12.5	□□□□□ -0.41
RFK-204	ENST00000479197	RHOH	Q15669	191 aa		12.5	□□□□□ -0.41
RFK-204	ENST00000479197	COMMD7	Q86VX2	200 aa		12.5	□□□□□ -0.41
RFK-204	ENST00000479197	UBE2DNL	Q8IWF7	75 aa		12.5	□□□□□ -0.41
RFK-204	ENST00000479197	AP1S3	Q96PC3	154 aa		12.5	□□□□□ -0.41
RFK-204	ENST00000479197		K7EQD1	137 aa		12.49	□□□□□ -0.41
RFK-204	ENST00000479197	MRPL23	Q16540	153 aa	Known RBP	12.49	□□□□□ -0.41
RFK-204	ENST00000479197	RNF212	Q495C1	297 aa		12.49	□□□□□ -0.41
RFK-204	ENST00000479197	OR10G8	Q8NGN5	311 aa		12.49	□□□□□ -0.41
RFK-204	ENST00000479197	TSKU	Q8WUA8	353 aa		12.49	□□□□□ -0.41
RFK-204	ENST00000479197	PRADC1	Q9BSG0	188 aa		12.49	□□□□□ -0.41
RFK-204	ENST00000479197	CNFN	Q9BYD5	112 aa		12.49	□□□□□ -0.41
RFK-204	ENST00000479197		V9GYV3	84 aa		12.49	□□□□□ -0.41
RFK-204	ENST00000479197	KMT2A	Q03164	3969 aa		12.49	□□□□□ -0.41
RFK-204	ENST00000479197	CCL18	P55774	89 aa		12.48	□□□□□ -0.41
RFK-204	ENST00000479197	WDR73	Q6P4I2	378 aa		12.48	□□□□□ -0.41
RFK-204	ENST00000479197		Q6ZSN1	163 aa		12.48	□□□□□ -0.41
RFK-204	ENST00000479197	GFRA4	Q9GZZ7	299 aa		12.48	□□□□□ -0.41
RFK-204	ENST00000479197	MSRB1	Q9NZV6	116 aa		12.48	□□□□□ -0.41
RFK-204	ENST00000479197	LOC100131303	A0A0U1RQF7	123 aa		12.47	□□□□□ -0.41
RFK-204	ENST00000479197	LINC00862	A6NCI5	91 aa		12.47	□□□□□ -0.41
RFK-204	ENST00000479197	NTF3	P20783	257 aa		12.47	□□□□□ -0.41
RFK-204	ENST00000479197	SRI	P30626	198 aa		12.47	□□□□□ -0.41
RFK-204	ENST00000479197	C14orf178	Q8N769	122 aa	Predicted RBP	12.47	□□□□□ -0.41
RFK-204	ENST00000479197	SMIM17	P0DL12	118 aa		12.47	□□□□□ -0.41
RFK-204	ENST00000479197	FOXA3	P55318	350 aa	Predicted RBP	12.47	□□□□□ -0.41
RFK-204	ENST00000479197	TMEM218	A2RU14	115 aa		12.46	□□□□□ -0.42
RFK-204	ENST00000479197	FAM231B	A6NCW3	169 aa		12.46	□□□□□ -0.42
RFK-204	ENST00000479197	PNRC1	Q12796	327 aa	Predicted RBP	12.46	□□□□□ -0.42
RFK-204	ENST00000479197	PGLYRP4	Q96LB8	373 aa		12.46	□□□□□ -0.42
RFK-204	ENST00000479197	LINC00588	Q9Y4M8	146 aa		12.46	□□□□□ -0.42
RFK-204	ENST00000479197	DNAH6	Q9C0G6	4158 aa		12.45	□□□□□ -0.42
RFK-204	ENST00000479197	HIGD1C	A8MV81	97 aa		12.45	□□□□□ -0.42
RFK-204	ENST00000479197	TRGC1	P0CF51	173 aa		12.45	□□□□□ -0.42
RFK-204	ENST00000479197	FAM3B	P58499	235 aa	Predicted RBP	12.45	□□□□□ -0.42
RFK-204	ENST00000479197	TWIST1	Q15672	202 aa		12.45	□□□□□ -0.42
RFK-204	ENST00000479197	ZNF56	Q15929	161 aa		12.45	□□□□□ -0.42
RFK-204	ENST00000479197	ESRG	Q1W209	222 aa		12.45	□□□□□ -0.42
RFK-204	ENST00000479197	NEGR1	Q7Z3B1	354 aa		12.45	□□□□□ -0.42
RFK-204	ENST00000479197	KRTAP3-3	Q9BYR6	98 aa		12.45	□□□□□ -0.42
RFK-204	ENST00000479197	KRTAP3-2	Q9BYR7	98 aa		12.45	□□□□□ -0.42
RFK-204	ENST00000479197	KIF25-AS1	Q9Y6Z4	181 aa		12.45	□□□□□ -0.42
RFK-204	ENST00000479197	RAB4B	P61018	213 aa		12.44	□□□□□ -0.42
RFK-204	ENST00000479197	SH2D6	Q7Z4S9	175 aa		12.44	□□□□□ -0.42
RFK-204	ENST00000479197	BORCS7	Q96B45	105 aa		12.44	□□□□□ -0.42
RFK-204	ENST00000479197	ADCYAP1	P18509	176 aa		12.43	□□□□□ -0.42
RFK-204	ENST00000479197		F5H697	171 aa		12.42	□□□□□ -0.42
RFK-204	ENST00000479197		F8W036	122 aa		12.42	□□□□□ -0.42
RFK-204	ENST00000479197	EVI2A	P22794	236 aa		12.42	□□□□□ -0.42
RFK-204	ENST00000479197	LINC00315	P59091	139 aa		12.42	□□□□□ -0.42
RFK-204	ENST00000479197	LYPD5	Q6UWN5	251 aa		12.42	□□□□□ -0.42
RFK-204	ENST00000479197	DPH3P1	Q9H4G8	78 aa		12.42	□□□□□ -0.42
RFK-204	ENST00000479197	NAT8B	Q9UHF3	227 aa		12.42	□□□□□ -0.42
RFK-204	ENST00000479197	MRPS16	Q9Y3D3	137 aa	Known RBP	12.42	□□□□□ -0.42
RFK-204	ENST00000479197	TRBV10-1	A0A0K0K1A3	114 aa		12.41	□□□□□ -0.42
RFK-204	ENST00000479197		A0A1B0GUT8	65 aa		12.41	□□□□□ -0.42
RFK-204	ENST00000479197	SMIM27	A0A1W2PRY6	76 aa		12.41	□□□□□ -0.42
RFK-204	ENST00000479197	PPP1R2P9	O14990	202 aa		12.41	□□□□□ -0.42
RFK-204	ENST00000479197	MGP	P08493	103 aa		12.41	□□□□□ -0.42
RFK-204	ENST00000479197	NUP35	Q8NFH5	326 aa		12.41	□□□□□ -0.42
RFK-204	ENST00000479197	SEC11C	Q9BY50	192 aa		12.41	□□□□□ -0.42
RFK-204	ENST00000479197		Q9UF83	564 aa		12.41	□□□□□ -0.42
RFK-204	ENST00000479197	GAGE12J	A6NER3	117 aa		12.4	□□□□□ -0.42
RFK-204	ENST00000479197	LINC00694	P0DN24	101 aa		12.4	□□□□□ -0.42
RFK-204	ENST00000479197	GAGE1	Q13065	139 aa		12.4	□□□□□ -0.42
RFK-204	ENST00000479197	GAGE4	Q13068	117 aa		12.4	□□□□□ -0.42
RFK-204	ENST00000479197	GAGE5	Q13069	117 aa		12.4	□□□□□ -0.42
RFK-204	ENST00000479197	GAGE13	Q4V321	117 aa		12.4	□□□□□ -0.42
RFK-204	ENST00000479197	ZNRF2	Q8NHG8	242 aa		12.4	□□□□□ -0.42
RFK-204	ENST00000479197	UPK3B	Q9BT76	320 aa		12.4	□□□□□ -0.42
RFK-204	ENST00000479197	SMIM15	Q7Z3B0	74 aa		12.39	□□□□□ -0.43
RFK-204	ENST00000479197	MT-ND4L	P03901	98 aa		12.38	□□□□□ -0.43
RFK-204	ENST00000479197	ATP6V0E2	Q8NHE4	81 aa		12.38	□□□□□ -0.43
RFK-204	ENST00000479197	ANAPC16	Q96DE5	110 aa		12.38	□□□□□ -0.43
RFK-204	ENST00000479197	TIRAP	P58753	221 aa		12.37	□□□□□ -0.43
RFK-204	ENST00000479197	RPL36A	P83881	106 aa	Known RBP	12.37	□□□□□ -0.43
RFK-204	ENST00000479197	SUMO4	Q6EEV6	95 aa		12.37	□□□□□ -0.43
RFK-204	ENST00000479197	RPL36AL	Q969Q0	106 aa	Known RBP	12.37	□□□□□ -0.43
RFK-204	ENST00000479197	IGLV2-18	A0A075B6J9	118 aa		12.37	□□□□□ -0.43
RFK-204	ENST00000479197		H7C1H1	209 aa		12.37	□□□□□ -0.43
RFK-204	ENST00000479197	RIG	Q13278	110 aa		12.37	□□□□□ -0.43
RFK-204	ENST00000479197	TRBV7-3	A0A075B6L6	115 aa		12.36	□□□□□ -0.43
RFK-204	ENST00000479197	NEXN-AS1	Q8NBZ9	246 aa		12.36	□□□□□ -0.43
RFK-204	ENST00000479197	GTSF1L	Q9H1H1	148 aa		12.36	□□□□□ -0.43
RFK-204	ENST00000479197		Q9H8V8	135 aa		12.36	□□□□□ -0.43
RFK-204	ENST00000479197		M0QY20	66 aa		12.35	□□□□□ -0.43
RFK-204	ENST00000479197	C10orf91	Q5T1B1	145 aa		12.35	□□□□□ -0.43
RFK-204	ENST00000479197	UBE2D3	P61077	147 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms