RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 CD7P09564 240 aa10.71□□□□□ -0.69
CCDC78-210ENST00000478979 BLCAPP62952 87 aa10.71□□□□□ -0.69
CCDC78-210ENST00000478979 LYRM7Q5U5X0 104 aa10.71□□□□□ -0.69
CCDC78-210ENST00000478979 SHISA2Q6UWI4 295 aa10.71□□□□□ -0.69
CCDC78-210ENST00000478979 MAPK1IP1LQ8NDC0 245 aa10.71□□□□□ -0.69
CCDC78-210ENST00000478979 SCGB3A1Q96QR1 104 aa10.71□□□□□ -0.69
CCDC78-210ENST00000478979 CITED1Q99966 193 aa10.71□□□□□ -0.69
CCDC78-210ENST00000478979 SETD2Q9BYW2 2564 aaPredicted RBP10.71□□□□□ -0.7
CCDC78-210ENST00000478979 IGKV3D-20A0A0C4DH25 116 aa10.71□□□□□ -0.7
CCDC78-210ENST00000478979 F6UB75 175 aa10.71□□□□□ -0.7
CCDC78-210ENST00000478979 PF4V1P10720 104 aa10.71□□□□□ -0.7
CCDC78-210ENST00000478979 TRAV8-2A0A0B4J237 113 aa10.7□□□□□ -0.7
CCDC78-210ENST00000478979 SLC25A16P16260 332 aa10.7□□□□□ -0.7
CCDC78-210ENST00000478979 ARL3P36405 182 aa10.7□□□□□ -0.7
CCDC78-210ENST00000478979 ATP5J2P56134 94 aa10.7□□□□□ -0.7
CCDC78-210ENST00000478979 TMEM95Q3KNT9 176 aa10.7□□□□□ -0.7
CCDC78-210ENST00000478979 CCL19Q99731 98 aa10.7□□□□□ -0.7
CCDC78-210ENST00000478979 NDUFA11Q86Y39 141 aa10.7□□□□□ -0.7
CCDC78-210ENST00000478979 SBSPONQ8IVN8 264 aa10.7□□□□□ -0.7
CCDC78-210ENST00000478979 NEXN-AS1Q8NBZ9 246 aa10.69□□□□□ -0.7
CCDC78-210ENST00000478979 KLHL30-AS1Q8NEE0 82 aa10.69□□□□□ -0.7
CCDC78-210ENST00000478979 SONP18583 2426 aaKnown RBP10.69□□□□□ -0.7
CCDC78-210ENST00000478979 IGHV4-30-2A0A087WSY4 118 aa10.69□□□□□ -0.7
CCDC78-210ENST00000478979 TMEM262E9PQX1 116 aa10.69□□□□□ -0.7
CCDC78-210ENST00000478979 EDN2P20800 178 aa10.69□□□□□ -0.7
CCDC78-210ENST00000478979 MOB4Q9Y3A3 225 aa10.69□□□□□ -0.7
CCDC78-210ENST00000478979 IGHV1-69DA0A0B4J2H0 117 aa10.69□□□□□ -0.7
CCDC78-210ENST00000478979 TRBV7-9A0A0J9YWB2 115 aa10.69□□□□□ -0.7
CCDC78-210ENST00000478979 IGHV1-69P01742 117 aa10.69□□□□□ -0.7
CCDC78-210ENST00000478979 PRR9Q5T870 116 aa10.69□□□□□ -0.7
CCDC78-210ENST00000478979 C20orf173Q96LM9 149 aa10.69□□□□□ -0.7
CCDC78-210ENST00000478979 TRBV20-1A0A075B6N2 111 aa10.68□□□□□ -0.7
CCDC78-210ENST00000478979 SMIM2Q9BVW6 85 aa10.68□□□□□ -0.7
CCDC78-210ENST00000478979 NOTCH3Q9UM47 2321 aa10.68□□□□□ -0.7
CCDC78-210ENST00000478979 MXRA5Q9NR99 2828 aa10.68□□□□□ -0.7
CCDC78-210ENST00000478979 COX6B1P14854 86 aa10.68□□□□□ -0.7
CCDC78-210ENST00000478979 HERV-K104P63124 156 aa10.68□□□□□ -0.7
CCDC78-210ENST00000478979 RASL10AQ92737 203 aa10.68□□□□□ -0.7
CCDC78-210ENST00000478979 HIF1ANQ9NWT6 349 aa10.68□□□□□ -0.7
CCDC78-210ENST00000478979 CCDC179H3BU77 68 aa10.67□□□□□ -0.7
CCDC78-210ENST00000478979 RHODO00212 210 aa10.67□□□□□ -0.7
CCDC78-210ENST00000478979 M0R381 172 aa10.67□□□□□ -0.7
CCDC78-210ENST00000478979 SCGB1C2P0DMR2 95 aa10.67□□□□□ -0.7
CCDC78-210ENST00000478979 NDUFV3P56181 108 aaKnown RBP10.67□□□□□ -0.7
CCDC78-210ENST00000478979 SPANXN1Q5VSR9 72 aa10.67□□□□□ -0.7
CCDC78-210ENST00000478979 PIMREGQ9BSJ6 248 aa10.67□□□□□ -0.7
CCDC78-210ENST00000478979 TRBV7-1A0A0A6YYK4 115 aa10.66□□□□□ -0.7
CCDC78-210ENST00000478979 IGHV7-4-1A0A0J9YVY3 117 aa10.66□□□□□ -0.7
CCDC78-210ENST00000478979 GAGE2BQ13066 116 aa10.66□□□□□ -0.7
CCDC78-210ENST00000478979 GAGE2EQ4V326 116 aa10.66□□□□□ -0.7
CCDC78-210ENST00000478979 BAALCQ8WXS3 180 aa10.66□□□□□ -0.7
CCDC78-210ENST00000478979 TOMM6Q96B49 74 aa10.66□□□□□ -0.7
CCDC78-210ENST00000478979 PRORYQ9H606 182 aa10.66□□□□□ -0.7
CCDC78-210ENST00000478979 GAGE2DQ9UEU5 116 aa10.66□□□□□ -0.7
CCDC78-210ENST00000478979 TRAV4A0A0B4J268 109 aa10.66□□□□□ -0.7
CCDC78-210ENST00000478979 SLC50A1Q9BRV3 221 aa10.66□□□□□ -0.7
CCDC78-210ENST00000478979 SMIM20Q8N5G0 67 aa10.66□□□□□ -0.7
CCDC78-210ENST00000478979 NAV2Q8IVL1 2488 aa10.65□□□□□ -0.7
CCDC78-210ENST00000478979 GAGE12JA6NER3 117 aa10.65□□□□□ -0.7
CCDC78-210ENST00000478979 CRLF1O75462 422 aa10.65□□□□□ -0.7
CCDC78-210ENST00000478979 SNCGO76070 127 aa10.65□□□□□ -0.7
CCDC78-210ENST00000478979 GAGE7O76087 117 aa10.65□□□□□ -0.7
CCDC78-210ENST00000478979 CFC1BP0CG36 223 aa10.65□□□□□ -0.7
CCDC78-210ENST00000478979 CFC1P0CG37 223 aa10.65□□□□□ -0.7
CCDC78-210ENST00000478979 GAGE12FP0CL80 117 aa10.65□□□□□ -0.7
CCDC78-210ENST00000478979 GAGE12GP0CL81 117 aa10.65□□□□□ -0.7
CCDC78-210ENST00000478979 GAGE12IP0CL82 117 aa10.65□□□□□ -0.7
CCDC78-210ENST00000478979 GAGE4Q13068 117 aa10.65□□□□□ -0.7
CCDC78-210ENST00000478979 ORMDL2Q53FV1 153 aa10.65□□□□□ -0.7
CCDC78-210ENST00000478979 FBN2P35556 2912 aa10.65□□□□□ -0.7
CCDC78-210ENST00000478979 SLC25A20O43772 301 aa10.64□□□□□ -0.71
CCDC78-210ENST00000478979 AVPP01185 164 aa10.64□□□□□ -0.71
CCDC78-210ENST00000478979 FAM110AQ9BQ89 295 aa10.64□□□□□ -0.71
CCDC78-210ENST00000478979 TEX15Q9BXT5 2789 aa10.64□□□□□ -0.71
CCDC78-210ENST00000478979 A0A0J9YY99 117 aa10.64□□□□□ -0.71
CCDC78-210ENST00000478979 RPL32P62910 135 aaKnown RBP10.64□□□□□ -0.71
CCDC78-210ENST00000478979 C10orf99Q6UWK7 81 aa10.64□□□□□ -0.71
CCDC78-210ENST00000478979 C10orf126Q8N4M7 172 aa10.64□□□□□ -0.71
CCDC78-210ENST00000478979 EPG5Q9HCE0 2579 aa10.64□□□□□ -0.71
CCDC78-210ENST00000478979 C9JAW5 83 aa10.64□□□□□ -0.71
CCDC78-210ENST00000478979 CRIP2P52943 208 aaPredicted RBP10.64□□□□□ -0.71
CCDC78-210ENST00000478979 C2orf66Q6UXQ4 117 aa10.64□□□□□ -0.71
CCDC78-210ENST00000478979 CCDC168Q8NDH2 2452 aa10.64□□□□□ -0.71
CCDC78-210ENST00000478979 IGKV3-20P01619 116 aa10.63□□□□□ -0.71
CCDC78-210ENST00000478979 S100A4P26447 101 aaKnown RBP10.63□□□□□ -0.71
CCDC78-210ENST00000478979 SUMO2P61956 95 aaKnown RBP10.63□□□□□ -0.71
CCDC78-210ENST00000478979 TTC32Q5I0X7 151 aa10.63□□□□□ -0.71
CCDC78-210ENST00000478979 WNK1Q9H4A3 2382 aa10.63□□□□□ -0.71
CCDC78-210ENST00000478979 PRB1P04280 392 aa10.62□□□□□ -0.71
CCDC78-210ENST00000478979 RNASE4P34096 147 aaKnown RBP10.62□□□□□ -0.71
CCDC78-210ENST00000478979 EMP1P54849 157 aa10.62□□□□□ -0.71
CCDC78-210ENST00000478979 TRPT1Q86TN4 253 aaKnown RBP10.62□□□□□ -0.71
CCDC78-210ENST00000478979 ASIPP42127 132 aa10.62□□□□□ -0.71
CCDC78-210ENST00000478979 RPL39LQ96EH5 51 aaKnown RBP10.62□□□□□ -0.71
CCDC78-210ENST00000478979 IGHV3-30P01768 117 aa10.61□□□□□ -0.71
CCDC78-210ENST00000478979 IGHV3-30-5P0DP03 117 aa10.61□□□□□ -0.71
CCDC78-210ENST00000478979 IFITM1P13164 125 aa10.61□□□□□ -0.71
CCDC78-210ENST00000478979 C10orf105Q8TEF2 133 aa10.61□□□□□ -0.71
CCDC78-210ENST00000478979 MGPP08493 103 aa10.61□□□□□ -0.71
CCDC78-210ENST00000478979 RAX2Q96IS3 184 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms