RNA–Protein interactions for RNA: ENST00000477424.2

C4A-253, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-253ENST00000477424 GAGE12JA6NER3 117 aa12.1□□□□□ -0.47
C4A-253ENST00000477424 RHODO00212 210 aa12.1□□□□□ -0.47
C4A-253ENST00000477424 SNAI2O43623 268 aa12.1□□□□□ -0.47
C4A-253ENST00000477424 PDE6DO43924 150 aa12.1□□□□□ -0.47
C4A-253ENST00000477424 GAGE1Q13065 139 aa12.1□□□□□ -0.47
C4A-253ENST00000477424 GAGE4Q13068 117 aa12.1□□□□□ -0.47
C4A-253ENST00000477424 GAGE5Q13069 117 aa12.1□□□□□ -0.47
C4A-253ENST00000477424 GAGE13Q4V321 117 aa12.1□□□□□ -0.47
C4A-253ENST00000477424 MED9Q9NWA0 146 aa12.1□□□□□ -0.47
C4A-253ENST00000477424 MUC21A0A0G2JKD1 596 aa12.09□□□□□ -0.47
C4A-253ENST00000477424 MUC21A0A140T8X8 626 aa12.09□□□□□ -0.47
C4A-253ENST00000477424 BTF3P20290 206 aaKnown RBP12.09□□□□□ -0.47
C4A-253ENST00000477424 ATP6V0E2Q8NHE4 81 aa12.09□□□□□ -0.47
C4A-253ENST00000477424 SSBP4Q9BWG4 385 aaPredicted RBP12.09□□□□□ -0.47
C4A-253ENST00000477424 HERC2O95714 4834 aa12.08□□□□□ -0.47
C4A-253ENST00000477424 C19orf71A6NCJ1 209 aa12.08□□□□□ -0.48
C4A-253ENST00000477424 GNG4P50150 75 aa12.08□□□□□ -0.48
C4A-253ENST00000477424 OR5AL1P0C617 328 aa12.07□□□□□ -0.48
C4A-253ENST00000477424 GZMBP10144 247 aa12.07□□□□□ -0.48
C4A-253ENST00000477424 LYPD6BQ8NI32 183 aa12.07□□□□□ -0.48
C4A-253ENST00000477424 GTSF1LQ9H1H1 148 aa12.07□□□□□ -0.48
C4A-253ENST00000477424 LELP1Q5T871 98 aa12.06□□□□□ -0.48
C4A-253ENST00000477424 SMIM12Q96EX1 92 aa12.06□□□□□ -0.48
C4A-253ENST00000477424 IGHV3-38A0A0C4DH36 116 aa12.05□□□□□ -0.48
C4A-253ENST00000477424 IGLC6P0CF74 106 aa12.05□□□□□ -0.48
C4A-253ENST00000477424 EVI2AP22794 236 aa12.05□□□□□ -0.48
C4A-253ENST00000477424 TAGLN2P37802 199 aaKnown RBP12.05□□□□□ -0.48
C4A-253ENST00000477424 BLOC1S1P78537 153 aa12.05□□□□□ -0.48
C4A-253ENST00000477424 LINC01556Q5JQF7 62 aa12.05□□□□□ -0.48
C4A-253ENST00000477424 OR10J3Q5JRS4 329 aa12.05□□□□□ -0.48
C4A-253ENST00000477424 Q8N3U1 123 aa12.05□□□□□ -0.48
C4A-253ENST00000477424 OR2D3Q8NGH3 330 aa12.05□□□□□ -0.48
C4A-253ENST00000477424 RBFOX3A6NFN3 312 aa12.04□□□□□ -0.48
C4A-253ENST00000477424 KRTAP10-2P60368 255 aa12.04□□□□□ -0.48
C4A-253ENST00000477424 SSTP61278 116 aa12.04□□□□□ -0.48
C4A-253ENST00000477424 MSRB1Q9NZV6 116 aa12.04□□□□□ -0.48
C4A-253ENST00000477424 TRAV9-2A0A087WT02 112 aa12.03□□□□□ -0.48
C4A-253ENST00000477424 TRAV8-6A0A0B4J262 113 aa12.03□□□□□ -0.48
C4A-253ENST00000477424 SPANXN1Q5VSR9 72 aa12.03□□□□□ -0.48
C4A-253ENST00000477424 SPATA12Q7Z6I5 190 aa12.03□□□□□ -0.48
C4A-253ENST00000477424 K7EN84 100 aa12.02□□□□□ -0.49
C4A-253ENST00000477424 K7EP13 123 aa12.02□□□□□ -0.49
C4A-253ENST00000477424 IGHV3-30P01768 117 aa12.02□□□□□ -0.49
C4A-253ENST00000477424 IGHV3-33P01772 117 aa12.02□□□□□ -0.49
C4A-253ENST00000477424 IGHV3-30-3P0DP02 117 aa12.02□□□□□ -0.49
C4A-253ENST00000477424 IGHV3-30-5P0DP03 117 aa12.02□□□□□ -0.49
C4A-253ENST00000477424 FER1L6-AS1Q8NA97 138 aa12.02□□□□□ -0.49
C4A-253ENST00000477424 DAZAP1Q96EP5 407 aaKnown RBP12.02□□□□□ -0.49
C4A-253ENST00000477424 C16orf90A8MZG2 172 aa12.01□□□□□ -0.49
C4A-253ENST00000477424 P01737 135 aa12.01□□□□□ -0.49
C4A-253ENST00000477424 ZNF56Q15929 161 aa12.01□□□□□ -0.49
C4A-253ENST00000477424 C10orf126Q8N4M7 172 aa12.01□□□□□ -0.49
C4A-253ENST00000477424 TPPP3Q9BW30 176 aa12.01□□□□□ -0.49
C4A-253ENST00000477424 KIF25-AS1Q9Y6Z4 181 aa12.01□□□□□ -0.49
C4A-253ENST00000477424 TRBV10-1A0A0K0K1A3 114 aa12□□□□□ -0.49
C4A-253ENST00000477424 RPS20P60866 119 aaKnown RBP12□□□□□ -0.49
C4A-253ENST00000477424 RAB4BP61018 213 aa12□□□□□ -0.49
C4A-253ENST00000477424 TOR2AQ5JU69 321 aa12□□□□□ -0.49
C4A-253ENST00000477424 NFE4Q86UQ8 179 aa12□□□□□ -0.49
C4A-253ENST00000477424 NUDT10Q8NFP7 164 aa12□□□□□ -0.49
C4A-253ENST00000477424 OCC1Q8TAD7 63 aa12□□□□□ -0.49
C4A-253ENST00000477424 NUDT11Q96G61 164 aa12□□□□□ -0.49
C4A-253ENST00000477424 TMEM250H0YL14 139 aa11.99□□□□□ -0.49
C4A-253ENST00000477424 UBE2D3P61077 147 aa11.99□□□□□ -0.49
C4A-253ENST00000477424 UBE2D2P62837 147 aa11.99□□□□□ -0.49
C4A-253ENST00000477424 NEXN-AS1Q8NBZ9 246 aa11.99□□□□□ -0.49
C4A-253ENST00000477424 AP1S3Q96PC3 154 aa11.99□□□□□ -0.49
C4A-253ENST00000477424 RNASE7Q9H1E1 156 aaKnown RBP11.99□□□□□ -0.49
C4A-253ENST00000477424 IBA57-AS1B1ANH7 110 aa11.98□□□□□ -0.49
C4A-253ENST00000477424 FUSP35637 526 aaKnown RBP eCLIP11.98□□□□□ -0.49
C4A-253ENST00000477424 OR10G8Q8NGN5 311 aa11.98□□□□□ -0.49
C4A-253ENST00000477424 BIN3Q9NQY0 253 aa11.98□□□□□ -0.49
C4A-253ENST00000477424 TRBV7-3A0A075B6L6 115 aa11.97□□□□□ -0.49
C4A-253ENST00000477424 RPL36AP83881 106 aaKnown RBP11.97□□□□□ -0.49
C4A-253ENST00000477424 LYZL1Q6UWQ5 148 aa11.97□□□□□ -0.49
C4A-253ENST00000477424 RPL36ALQ969Q0 106 aaKnown RBP11.97□□□□□ -0.49
C4A-253ENST00000477424 A0A087WTM6 91 aa11.96□□□□□ -0.49
C4A-253ENST00000477424 A0A087WWC5 75 aa11.96□□□□□ -0.49
C4A-253ENST00000477424 CTRLP40313 264 aa11.96□□□□□ -0.49
C4A-253ENST00000477424 CEBPGP53567 150 aa11.96□□□□□ -0.49
C4A-253ENST00000477424 ERVFC1-1P60608 527 aa11.96□□□□□ -0.49
C4A-253ENST00000477424 FAM210AQ96ND0 272 aa11.96□□□□□ -0.49
C4A-253ENST00000477424 RPP21Q9H633 154 aaKnown RBP11.96□□□□□ -0.49
C4A-253ENST00000477424 Q9HAA7 133 aa11.96□□□□□ -0.49
C4A-253ENST00000477424 LRP1BQ9NZR2 4599 aa11.96□□□□□ -0.5
C4A-253ENST00000477424 XKRY2A2RUG3 117 aa11.95□□□□□ -0.5
C4A-253ENST00000477424 F5H697 171 aa11.95□□□□□ -0.5
C4A-253ENST00000477424 CACNG7P62955 275 aa11.95□□□□□ -0.5
C4A-253ENST00000477424 DAZ4Q86SG3 579 aaKnown RBP11.95□□□□□ -0.5
C4A-253ENST00000477424 EIF5A2Q9GZV4 153 aaKnown RBP11.95□□□□□ -0.5
C4A-253ENST00000477424 DAZ3Q9NR90 486 aaKnown RBP11.95□□□□□ -0.5
C4A-253ENST00000477424 MGPP08493 103 aa11.94□□□□□ -0.5
C4A-253ENST00000477424 SMIM17P0DL12 118 aa11.94□□□□□ -0.5
C4A-253ENST00000477424 DNAH5Q8TE73 4624 aa11.94□□□□□ -0.5
C4A-253ENST00000477424 RYR1P21817 5038 aa11.94□□□□□ -0.5
C4A-253ENST00000477424 F2Z2F3 143 aa11.93□□□□□ -0.5
C4A-253ENST00000477424 SRP19P09132 144 aaKnown RBP11.93□□□□□ -0.5
C4A-253ENST00000477424 NIT1Q86X76 327 aa11.93□□□□□ -0.5
C4A-253ENST00000477424 GTSF1Q8WW33 167 aa11.93□□□□□ -0.5
C4A-253ENST00000477424 NTF3P20783 257 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms