RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 RHODO00212 210 aa14.44□□□□□ -0.1
MAP1LC3A-204ENST00000476428 SSTP61278 116 aa14.44□□□□□ -0.1
MAP1LC3A-204ENST00000476428 SRSF3P84103 164 aaKnown RBP14.44□□□□□ -0.1
MAP1LC3A-204ENST00000476428 FAM74A4Q5TZK3 123 aa14.44□□□□□ -0.1
MAP1LC3A-204ENST00000476428 SPANXN1Q5VSR9 72 aa14.44□□□□□ -0.1
MAP1LC3A-204ENST00000476428 FER1L6-AS1Q8NA97 138 aa14.44□□□□□ -0.1
MAP1LC3A-204ENST00000476428 LY96Q9Y6Y9 160 aa14.44□□□□□ -0.1
MAP1LC3A-204ENST00000476428 XKRY2A2RUG3 117 aa14.43□□□□□ -0.1
MAP1LC3A-204ENST00000476428 ZNF727A8MUV8 499 aa14.43□□□□□ -0.1
MAP1LC3A-204ENST00000476428 PEA15Q15121 130 aa14.42□□□□□ -0.1
MAP1LC3A-204ENST00000476428 C14orf178Q8N769 122 aaPredicted RBP14.42□□□□□ -0.1
MAP1LC3A-204ENST00000476428 TPPP3Q9BW30 176 aa14.42□□□□□ -0.1
MAP1LC3A-204ENST00000476428 RPP21Q9H633 154 aaKnown RBP14.42□□□□□ -0.1
MAP1LC3A-204ENST00000476428 NACAE9PAV3 2078 aa14.42□□□□□ -0.1
MAP1LC3A-204ENST00000476428 NBDYA0A0U1RRE5 68 aa14.41□□□□□ -0.1
MAP1LC3A-204ENST00000476428 SH2D6Q7Z4S9 175 aa14.41□□□□□ -0.1
MAP1LC3A-204ENST00000476428 PCLOQ9Y6V0 5065 aa14.41□□□□□ -0.1
MAP1LC3A-204ENST00000476428 HERC2O95714 4834 aa14.4□□□□□ -0.1
MAP1LC3A-204ENST00000476428 FAM231DQ6ZW35 169 aa14.4□□□□□ -0.1
MAP1LC3A-204ENST00000476428 LINC01551Q86U37 167 aa14.4□□□□□ -0.1
MAP1LC3A-204ENST00000476428 Q9UF83 564 aa14.4□□□□□ -0.1
MAP1LC3A-204ENST00000476428 FRAS1Q86XX4 4008 aa14.4□□□□□ -0.1
MAP1LC3A-204ENST00000476428 DNAH10Q8IVF4 4471 aa14.39□□□□□ -0.11
MAP1LC3A-204ENST00000476428 GATCO43716 136 aaKnown RBP14.39□□□□□ -0.11
MAP1LC3A-204ENST00000476428 LYZL1Q6UWQ5 148 aa14.39□□□□□ -0.11
MAP1LC3A-204ENST00000476428 SMDT1Q9H4I9 107 aa14.39□□□□□ -0.11
MAP1LC3A-204ENST00000476428 A0A1W2PPQ1 181 aa14.38□□□□□ -0.11
MAP1LC3A-204ENST00000476428 GAGE12JA6NER3 117 aa14.38□□□□□ -0.11
MAP1LC3A-204ENST00000476428 F2Z2F3 143 aa14.38□□□□□ -0.11
MAP1LC3A-204ENST00000476428 RAB14P61106 215 aa14.38□□□□□ -0.11
MAP1LC3A-204ENST00000476428 CACNG7P62955 275 aa14.38□□□□□ -0.11
MAP1LC3A-204ENST00000476428 GAGE1Q13065 139 aa14.38□□□□□ -0.11
MAP1LC3A-204ENST00000476428 GAGE4Q13068 117 aa14.38□□□□□ -0.11
MAP1LC3A-204ENST00000476428 GAGE5Q13069 117 aa14.38□□□□□ -0.11
MAP1LC3A-204ENST00000476428 GAGE13Q4V321 117 aa14.38□□□□□ -0.11
MAP1LC3A-204ENST00000476428 MSRB1Q9NZV6 116 aa14.38□□□□□ -0.11
MAP1LC3A-204ENST00000476428 ERVFC1-1P60608 527 aa14.37□□□□□ -0.11
MAP1LC3A-204ENST00000476428 TMEM241Q24JQ0 296 aa14.37□□□□□ -0.11
MAP1LC3A-204ENST00000476428 FAM74A3Q4VXF1 159 aa14.37□□□□□ -0.11
MAP1LC3A-204ENST00000476428 SIVA1O15304 175 aa14.36□□□□□ -0.11
MAP1LC3A-204ENST00000476428 TIRAPP58753 221 aa14.36□□□□□ -0.11
MAP1LC3A-204ENST00000476428 IFITM2Q01629 132 aa14.36□□□□□ -0.11
MAP1LC3A-204ENST00000476428 ATP6V0E2Q8NHE4 81 aa14.36□□□□□ -0.11
MAP1LC3A-204ENST00000476428 KIF25-AS1Q9Y6Z4 181 aa14.36□□□□□ -0.11
MAP1LC3A-204ENST00000476428 LINC00694P0DN24 101 aa14.35□□□□□ -0.11
MAP1LC3A-204ENST00000476428 CTRLP40313 264 aa14.35□□□□□ -0.11
MAP1LC3A-204ENST00000476428 RAB4BP61018 213 aa14.35□□□□□ -0.11
MAP1LC3A-204ENST00000476428 WDR73Q6P4I2 378 aa14.35□□□□□ -0.11
MAP1LC3A-204ENST00000476428 GTSF1Q8WW33 167 aa14.35□□□□□ -0.11
MAP1LC3A-204ENST00000476428 AP1S3Q96PC3 154 aa14.35□□□□□ -0.11
MAP1LC3A-204ENST00000476428 RTL8CO15255 209 aa14.34□□□□□ -0.11
MAP1LC3A-204ENST00000476428 LINC00315P59091 139 aa14.34□□□□□ -0.11
MAP1LC3A-204ENST00000476428 C1orf134Q5TEV5 83 aa14.34□□□□□ -0.11
MAP1LC3A-204ENST00000476428 KRTAP1-5Q9BYS1 174 aa14.34□□□□□ -0.11
MAP1LC3A-204ENST00000476428 OSTCQ9NRP0 149 aa14.34□□□□□ -0.11
MAP1LC3A-204ENST00000476428 A8MWL6 223 aa14.33□□□□□ -0.12
MAP1LC3A-204ENST00000476428 SMIM17P0DL12 118 aa14.33□□□□□ -0.12
MAP1LC3A-204ENST00000476428 NTF3P20783 257 aa14.33□□□□□ -0.12
MAP1LC3A-204ENST00000476428 RPL23P62829 140 aaKnown RBP14.33□□□□□ -0.12
MAP1LC3A-204ENST00000476428 ZNF56Q15929 161 aa14.33□□□□□ -0.12
MAP1LC3A-204ENST00000476428 CLLU1Q5K131 121 aa14.33□□□□□ -0.12
MAP1LC3A-204ENST00000476428 GTSF1LQ9H1H1 148 aa14.33□□□□□ -0.12
MAP1LC3A-204ENST00000476428 NAT8Q9UHE5 227 aa14.33□□□□□ -0.12
MAP1LC3A-204ENST00000476428 TRBV10-1A0A0K0K1A3 114 aa14.32□□□□□ -0.12
MAP1LC3A-204ENST00000476428 F5H697 171 aa14.32□□□□□ -0.12
MAP1LC3A-204ENST00000476428 CT83Q5H943 113 aa14.32□□□□□ -0.12
MAP1LC3A-204ENST00000476428 TTC32Q5I0X7 151 aa14.32□□□□□ -0.12
MAP1LC3A-204ENST00000476428 SOHLH1Q5JUK2 328 aa14.32□□□□□ -0.12
MAP1LC3A-204ENST00000476428 WFDC10BQ8IUB3 73 aa14.32□□□□□ -0.12
MAP1LC3A-204ENST00000476428 ISOC2Q96AB3 205 aa14.32□□□□□ -0.12
MAP1LC3A-204ENST00000476428 CNFNQ9BYD5 112 aa14.32□□□□□ -0.12
MAP1LC3A-204ENST00000476428 DNAH2Q9P225 4427 aa14.31□□□□□ -0.12
MAP1LC3A-204ENST00000476428 TRGC1P0CF51 173 aa14.3□□□□□ -0.12
MAP1LC3A-204ENST00000476428 EVI2AP22794 236 aa14.3□□□□□ -0.12
MAP1LC3A-204ENST00000476428 FOXA3P55318 350 aaPredicted RBP14.3□□□□□ -0.12
MAP1LC3A-204ENST00000476428 ADIRFQ15847 76 aa14.3□□□□□ -0.12
MAP1LC3A-204ENST00000476428 LINC00336Q6ZUF6 198 aa14.3□□□□□ -0.12
MAP1LC3A-204ENST00000476428 RPL36AP83881 106 aaKnown RBP14.29□□□□□ -0.12
MAP1LC3A-204ENST00000476428 TWIST1Q15672 202 aa14.29□□□□□ -0.12
MAP1LC3A-204ENST00000476428 LELP1Q5T871 98 aa14.29□□□□□ -0.12
MAP1LC3A-204ENST00000476428 C6orf223Q8N319 242 aa14.29□□□□□ -0.12
MAP1LC3A-204ENST00000476428 C15orf54Q8N8G6 183 aa14.29□□□□□ -0.12
MAP1LC3A-204ENST00000476428 NEXN-AS1Q8NBZ9 246 aa14.29□□□□□ -0.12
MAP1LC3A-204ENST00000476428 OR10G8Q8NGN5 311 aa14.29□□□□□ -0.12
MAP1LC3A-204ENST00000476428 RPL36ALQ969Q0 106 aaKnown RBP14.29□□□□□ -0.12
MAP1LC3A-204ENST00000476428 PGLYRP4Q96LB8 373 aa14.29□□□□□ -0.12
MAP1LC3A-204ENST00000476428 TRAV8-6A0A0B4J262 113 aa14.28□□□□□ -0.12
MAP1LC3A-204ENST00000476428 MGPP08493 103 aa14.28□□□□□ -0.12
MAP1LC3A-204ENST00000476428 OR10J3Q5JRS4 329 aa14.28□□□□□ -0.12
MAP1LC3A-204ENST00000476428 TSKUQ8WUA8 353 aa14.28□□□□□ -0.12
MAP1LC3A-204ENST00000476428 V9GYV3 84 aa14.28□□□□□ -0.12
MAP1LC3A-204ENST00000476428 TRBV7-3A0A075B6L6 115 aa14.27□□□□□ -0.13
MAP1LC3A-204ENST00000476428 DNAH10OSP0CZ25 163 aa14.27□□□□□ -0.13
MAP1LC3A-204ENST00000476428 UBE2D3P61077 147 aa14.27□□□□□ -0.13
MAP1LC3A-204ENST00000476428 UBE2D2P62837 147 aa14.27□□□□□ -0.13
MAP1LC3A-204ENST00000476428 DNAH17Q9UFH2 4485 aa14.27□□□□□ -0.13
MAP1LC3A-204ENST00000476428 PRSS29PA6NIE9 313 aa14.26□□□□□ -0.13
MAP1LC3A-204ENST00000476428 GFRA4Q9GZZ7 299 aa14.26□□□□□ -0.13
MAP1LC3A-204ENST00000476428 DPH3P1Q9H4G8 78 aa14.26□□□□□ -0.13
MAP1LC3A-204ENST00000476428 IGHV3-38A0A0C4DH36 116 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms