RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 TDRG1Q3Y452 100 aa9.48□□□□□ -0.89
FAM3A-218ENST00000475657 IBA57Q5T440 356 aaKnown RBP9.48□□□□□ -0.89
FAM3A-218ENST00000475657 DAZAP1Q96EP5 407 aaKnown RBP9.48□□□□□ -0.89
FAM3A-218ENST00000475657 P01737 135 aa9.47□□□□□ -0.89
FAM3A-218ENST00000475657 LINC01559Q495D7 138 aa9.47□□□□□ -0.89
FAM3A-218ENST00000475657 FAM159AQ6UWV7 190 aa9.47□□□□□ -0.89
FAM3A-218ENST00000475657 SFRP2Q96HF1 295 aa9.47□□□□□ -0.89
FAM3A-218ENST00000475657 KCNS1Q96KK3 526 aa9.47□□□□□ -0.89
FAM3A-218ENST00000475657 OSTCQ9NRP0 149 aa9.47□□□□□ -0.89
FAM3A-218ENST00000475657 TNFRSF18Q9Y5U5 241 aa9.47□□□□□ -0.89
FAM3A-218ENST00000475657 IGHV1OR15-1A0A075B7D0 117 aa9.46□□□□□ -0.9
FAM3A-218ENST00000475657 SNURFLB1AK76 121 aa9.46□□□□□ -0.9
FAM3A-218ENST00000475657 B4DEV8 164 aa9.46□□□□□ -0.9
FAM3A-218ENST00000475657 Q6ZQT7 251 aa9.46□□□□□ -0.9
FAM3A-218ENST00000475657 Q6ZTI0 123 aa9.46□□□□□ -0.9
FAM3A-218ENST00000475657 SVBPQ8N300 66 aa9.46□□□□□ -0.9
FAM3A-218ENST00000475657 C15orf54Q8N8G6 183 aa9.46□□□□□ -0.9
FAM3A-218ENST00000475657 NUDT10Q8NFP7 164 aa9.46□□□□□ -0.9
FAM3A-218ENST00000475657 NUDT11Q96G61 164 aa9.46□□□□□ -0.9
FAM3A-218ENST00000475657 RNASE7Q9H1E1 156 aaKnown RBP9.46□□□□□ -0.9
FAM3A-218ENST00000475657 C11orf21Q9P2W6 132 aa9.46□□□□□ -0.9
FAM3A-218ENST00000475657 NAGKQ9UJ70 344 aa9.46□□□□□ -0.9
FAM3A-218ENST00000475657 A0A096LPF7 62 aa9.45□□□□□ -0.9
FAM3A-218ENST00000475657 IGKV3D-20A0A0C4DH25 116 aa9.45□□□□□ -0.9
FAM3A-218ENST00000475657 M0R036 132 aa9.45□□□□□ -0.9
FAM3A-218ENST00000475657 OXTP01178 125 aa9.45□□□□□ -0.9
FAM3A-218ENST00000475657 APOC3P02656 99 aa9.45□□□□□ -0.9
FAM3A-218ENST00000475657 ORM1P02763 201 aa9.45□□□□□ -0.9
FAM3A-218ENST00000475657 CXCL1P09341 107 aa9.45□□□□□ -0.9
FAM3A-218ENST00000475657 RPS20P60866 119 aaKnown RBP9.45□□□□□ -0.9
FAM3A-218ENST00000475657 ANXA2RQ3ZCQ2 193 aa9.45□□□□□ -0.9
FAM3A-218ENST00000475657 CT83Q5H943 113 aa9.45□□□□□ -0.9
FAM3A-218ENST00000475657 MUC21Q5SSG8 566 aa9.45□□□□□ -0.9
FAM3A-218ENST00000475657 RPP21Q9H633 154 aaKnown RBP9.45□□□□□ -0.9
FAM3A-218ENST00000475657 GSN-AS1Q9NRJ2 163 aa9.45□□□□□ -0.9
FAM3A-218ENST00000475657 FAT3Q8TDW7 4589 aa9.44□□□□□ -0.9
FAM3A-218ENST00000475657 TRGV11A0A075B6L2 103 aa9.44□□□□□ -0.9
FAM3A-218ENST00000475657 TRAV9-2A0A087WT02 112 aa9.44□□□□□ -0.9
FAM3A-218ENST00000475657 XKRY2A2RUG3 117 aa9.44□□□□□ -0.9
FAM3A-218ENST00000475657 K7EP13 123 aa9.44□□□□□ -0.9
FAM3A-218ENST00000475657 PPP1R2P9O14990 202 aa9.44□□□□□ -0.9
FAM3A-218ENST00000475657 GATCO43716 136 aaKnown RBP9.44□□□□□ -0.9
FAM3A-218ENST00000475657 RHEBQ15382 184 aa9.44□□□□□ -0.9
FAM3A-218ENST00000475657 CLRN3Q8NCR9 226 aa9.44□□□□□ -0.9
FAM3A-218ENST00000475657 OR2D3Q8NGH3 330 aa9.44□□□□□ -0.9
FAM3A-218ENST00000475657 OR10G8Q8NGN5 311 aa9.44□□□□□ -0.9
FAM3A-218ENST00000475657 NTN5Q8WTR8 489 aaPredicted RBP9.44□□□□□ -0.9
FAM3A-218ENST00000475657 ANAPC16Q96DE5 110 aa9.44□□□□□ -0.9
FAM3A-218ENST00000475657 NXPH4O95158 308 aa9.43□□□□□ -0.9
FAM3A-218ENST00000475657 SNAPINO95295 136 aa9.43□□□□□ -0.9
FAM3A-218ENST00000475657 MT-ND4LP03901 98 aa9.43□□□□□ -0.9
FAM3A-218ENST00000475657 VSIG2Q96IQ7 327 aa9.43□□□□□ -0.9
FAM3A-218ENST00000475657 V9GYV3 84 aa9.43□□□□□ -0.9
FAM3A-218ENST00000475657 RNF213Q63HN8 5207 aa9.42□□□□□ -0.9
FAM3A-218ENST00000475657 TRGV2A0A075B6R0 118 aa9.42□□□□□ -0.9
FAM3A-218ENST00000475657 IGLV5-52A0A0A0MRZ9 124 aa9.42□□□□□ -0.9
FAM3A-218ENST00000475657 ATP6V1G1O75348 118 aa9.42□□□□□ -0.9
FAM3A-218ENST00000475657 TYMSP04818 313 aa9.42□□□□□ -0.9
FAM3A-218ENST00000475657 ASIPP42127 132 aa9.42□□□□□ -0.9
FAM3A-218ENST00000475657 RPL19P84098 196 aaKnown RBP9.42□□□□□ -0.9
FAM3A-218ENST00000475657 DNLZQ5SXM8 178 aa9.42□□□□□ -0.9
FAM3A-218ENST00000475657 A0A087WWC5 75 aa9.41□□□□□ -0.9
FAM3A-218ENST00000475657 TMSB15BA0A087X1C1 80 aa9.41□□□□□ -0.9
FAM3A-218ENST00000475657 TRGV1A0A0A0MS02 117 aa9.41□□□□□ -0.9
FAM3A-218ENST00000475657 FAM231BA6NCW3 169 aa9.41□□□□□ -0.9
FAM3A-218ENST00000475657 A8MWL6 223 aa9.41□□□□□ -0.9
FAM3A-218ENST00000475657 IGHV3-53P01767 116 aa9.41□□□□□ -0.9
FAM3A-218ENST00000475657 ZNF415Q09FC8 603 aa9.41□□□□□ -0.9
FAM3A-218ENST00000475657 CTDSP1Q9GZU7 261 aa9.41□□□□□ -0.9
FAM3A-218ENST00000475657 GFRA4Q9GZZ7 299 aa9.41□□□□□ -0.9
FAM3A-218ENST00000475657 TP53TG3Q9ULZ0 132 aa9.41□□□□□ -0.9
FAM3A-218ENST00000475657 IGHV3-16A0A0C4DH30 117 aa9.4□□□□□ -0.9
FAM3A-218ENST00000475657 C7orf77A4D0Y5 90 aa9.4□□□□□ -0.9
FAM3A-218ENST00000475657 S100A1P23297 94 aa9.4□□□□□ -0.9
FAM3A-218ENST00000475657 S100A4P26447 101 aaKnown RBP9.4□□□□□ -0.9
FAM3A-218ENST00000475657 DAZ2Q13117 558 aaKnown RBP9.4□□□□□ -0.9
FAM3A-218ENST00000475657 LINC00528Q8N1L1 170 aa9.4□□□□□ -0.9
FAM3A-218ENST00000475657 C11orf72Q8NBR9 251 aa9.4□□□□□ -0.9
FAM3A-218ENST00000475657 TSKUQ8WUA8 353 aa9.4□□□□□ -0.9
FAM3A-218ENST00000475657 TMEM242Q9NWH2 141 aa9.4□□□□□ -0.9
FAM3A-218ENST00000475657 MSRB1Q9NZV6 116 aa9.4□□□□□ -0.9
FAM3A-218ENST00000475657 FAM30AQ9NZY2 134 aa9.4□□□□□ -0.9
FAM3A-218ENST00000475657 GRIFINA4D1Z8 144 aa9.39□□□□□ -0.91
FAM3A-218ENST00000475657 GNRH2O43555 120 aa9.39□□□□□ -0.91
FAM3A-218ENST00000475657 IGLC6P0CF74 106 aa9.39□□□□□ -0.91
FAM3A-218ENST00000475657 TCL1AP56279 114 aa9.39□□□□□ -0.91
FAM3A-218ENST00000475657 MRPL16Q9NX20 251 aaKnown RBP9.39□□□□□ -0.91
FAM3A-218ENST00000475657 IL36BQ9NZH7 164 aa9.39□□□□□ -0.91
FAM3A-218ENST00000475657 SNAI2O43623 268 aa9.38□□□□□ -0.91
FAM3A-218ENST00000475657 OR5AL1P0C617 328 aa9.38□□□□□ -0.91
FAM3A-218ENST00000475657 GZMBP10144 247 aa9.38□□□□□ -0.91
FAM3A-218ENST00000475657 RNASE3P12724 160 aaKnown RBP9.38□□□□□ -0.91
FAM3A-218ENST00000475657 CTRLP40313 264 aa9.38□□□□□ -0.91
FAM3A-218ENST00000475657 FOXA3P55318 350 aaPredicted RBP9.38□□□□□ -0.91
FAM3A-218ENST00000475657 FER1L6-AS1Q8NA97 138 aa9.38□□□□□ -0.91
FAM3A-218ENST00000475657 C9orf85Q96MD7 179 aa9.38□□□□□ -0.91
FAM3A-218ENST00000475657 SSBP4Q9BWG4 385 aaPredicted RBP9.38□□□□□ -0.91
FAM3A-218ENST00000475657 RPS10P5Q9NQ39 176 aa9.38□□□□□ -0.91
FAM3A-218ENST00000475657 SMIM27A0A1W2PRY6 76 aa9.37□□□□□ -0.91
FAM3A-218ENST00000475657 LRCOL1A6NCL2 159 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms