RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 CRIP2P52943 208 aaPredicted RBP10.32□□□□□ -0.76
SEMA4D-217ENST00000475255 LY6EQ16553 131 aa10.32□□□□□ -0.76
SEMA4D-217ENST00000475255 ITLN2Q8WWU7 325 aaPredicted RBP10.32□□□□□ -0.76
SEMA4D-217ENST00000475255 ABCA2Q9BZC7 2435 aa10.32□□□□□ -0.76
SEMA4D-217ENST00000475255 CENPVL3A0A0U1RRI6 287 aa10.32□□□□□ -0.76
SEMA4D-217ENST00000475255 C9JAW5 83 aa10.32□□□□□ -0.76
SEMA4D-217ENST00000475255 CFC1BP0CG36 223 aa10.32□□□□□ -0.76
SEMA4D-217ENST00000475255 CFC1P0CG37 223 aa10.32□□□□□ -0.76
SEMA4D-217ENST00000475255 TRAV2A0A0B4J234 112 aa10.32□□□□□ -0.76
SEMA4D-217ENST00000475255 ADARB2-AS1A8MUL3 147 aa10.32□□□□□ -0.76
SEMA4D-217ENST00000475255 ANKRD29Q8N6D5 301 aa10.32□□□□□ -0.76
SEMA4D-217ENST00000475255 ZNRF2Q8NHG8 242 aa10.32□□□□□ -0.76
SEMA4D-217ENST00000475255 ZNF580Q9UK33 172 aa10.32□□□□□ -0.76
SEMA4D-217ENST00000475255 A8MWV9 139 aa10.31□□□□□ -0.76
SEMA4D-217ENST00000475255 IGHV4-39P01824 125 aa10.31□□□□□ -0.76
SEMA4D-217ENST00000475255 ANAPC13Q9BS18 74 aa10.31□□□□□ -0.76
SEMA4D-217ENST00000475255 U3KQE9 123 aa10.31□□□□□ -0.76
SEMA4D-217ENST00000475255 TRBV7-1A0A0A6YYK4 115 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 TRAV41A0A0B4J266 112 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 C9orf139Q6ZV77 190 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 TRBV20-1A0A075B6N2 111 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 C11orf71Q6IPW1 123 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 NACAE9PAV3 2078 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 TRAV12-3A0A0B4J271 114 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 OOSP1A8MZH6 123 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 UBE2D3P61077 147 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 NPC2P61916 151 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 UBE2D2P62837 147 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 ADORA2A-AS1P86434 159 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 SUMO4Q6EEV6 95 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 C5orf56Q8N8D9 126 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 PPDPFLQ8WWR9 84 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 BPESC1Q9GZL8 116 aa10.3□□□□□ -0.76
SEMA4D-217ENST00000475255 CELSR2Q9HCU4 2923 aa10.29□□□□□ -0.76
SEMA4D-217ENST00000475255 HERVK_113P61574 105 aa10.29□□□□□ -0.76
SEMA4D-217ENST00000475255 TCTEX1D4Q5JR98 221 aa10.29□□□□□ -0.76
SEMA4D-217ENST00000475255 LINC00477Q96M19 166 aa10.29□□□□□ -0.76
SEMA4D-217ENST00000475255 C2CD3Q4AC94 2353 aa10.29□□□□□ -0.76
SEMA4D-217ENST00000475255 UBE2E1P51965 193 aa10.29□□□□□ -0.76
SEMA4D-217ENST00000475255 MRPL53Q96EL3 112 aaKnown RBP10.29□□□□□ -0.76
SEMA4D-217ENST00000475255 CSMD2Q7Z408 3487 aa10.28□□□□□ -0.76
SEMA4D-217ENST00000475255 TRAV12-2A0A075B6T6 113 aa10.28□□□□□ -0.76
SEMA4D-217ENST00000475255 SDHAF1A6NFY7 115 aa10.28□□□□□ -0.76
SEMA4D-217ENST00000475255 HTN1P15515 57 aa10.28□□□□□ -0.76
SEMA4D-217ENST00000475255 LINC00315P59091 139 aa10.28□□□□□ -0.76
SEMA4D-217ENST00000475255 TEN1Q86WV5 123 aa10.28□□□□□ -0.76
SEMA4D-217ENST00000475255 IGIPA6NJ69 53 aa10.28□□□□□ -0.76
SEMA4D-217ENST00000475255 B5MCH6 92 aa10.28□□□□□ -0.76
SEMA4D-217ENST00000475255 LINC01619G3V211 115 aa10.28□□□□□ -0.76
SEMA4D-217ENST00000475255 EIF4EBP3O60516 100 aaPredicted RBP10.28□□□□□ -0.76
SEMA4D-217ENST00000475255 IGHV3-30P01768 117 aa10.28□□□□□ -0.76
SEMA4D-217ENST00000475255 IGHV3-30-5P0DP03 117 aa10.28□□□□□ -0.76
SEMA4D-217ENST00000475255 A4D1N5 150 aa10.27□□□□□ -0.76
SEMA4D-217ENST00000475255 NPFFO15130 113 aa10.27□□□□□ -0.76
SEMA4D-217ENST00000475255 PRSS2P07478 247 aa10.27□□□□□ -0.76
SEMA4D-217ENST00000475255 ELANEP08246 267 aa10.27□□□□□ -0.76
SEMA4D-217ENST00000475255 LGALS3P17931 250 aaKnown RBP10.27□□□□□ -0.76
SEMA4D-217ENST00000475255 PMVKQ15126 192 aa10.27□□□□□ -0.76
SEMA4D-217ENST00000475255 SHISA2Q6UWI4 295 aa10.27□□□□□ -0.77
SEMA4D-217ENST00000475255 SOCS3O14543 225 aa10.26□□□□□ -0.77
SEMA4D-217ENST00000475255 ZNF688P0C7X2 276 aa10.26□□□□□ -0.77
SEMA4D-217ENST00000475255 RHPN1-AS1Q9BWJ2 59 aa10.26□□□□□ -0.77
SEMA4D-217ENST00000475255 J3QQQ9 107 aa10.26□□□□□ -0.77
SEMA4D-217ENST00000475255 TCF15Q12870 199 aa10.26□□□□□ -0.77
SEMA4D-217ENST00000475255 C10orf126Q8N4M7 172 aa10.26□□□□□ -0.77
SEMA4D-217ENST00000475255 TEX29Q8N6K0 151 aa10.26□□□□□ -0.77
SEMA4D-217ENST00000475255 PRO1854Q9UHT4 67 aa10.26□□□□□ -0.77
SEMA4D-217ENST00000475255 KIF25-AS1Q9Y6Z4 181 aa10.26□□□□□ -0.77
SEMA4D-217ENST00000475255 USP9YO00507 2555 aaPredicted RBP10.26□□□□□ -0.77
SEMA4D-217ENST00000475255 SLC25A20O43772 301 aa10.25□□□□□ -0.77
SEMA4D-217ENST00000475255 RNASE13Q5GAN3 156 aaKnown RBP10.25□□□□□ -0.77
SEMA4D-217ENST00000475255 MDFICQ9P1T7 246 aa10.25□□□□□ -0.77
SEMA4D-217ENST00000475255 OVOL1O14753 267 aa10.25□□□□□ -0.77
SEMA4D-217ENST00000475255 ZNF56Q15929 161 aa10.25□□□□□ -0.77
SEMA4D-217ENST00000475255 FAM159AQ6UWV7 190 aa10.25□□□□□ -0.77
SEMA4D-217ENST00000475255 NTN5Q8WTR8 489 aaPredicted RBP10.25□□□□□ -0.77
SEMA4D-217ENST00000475255 BLCAPP62952 87 aa10.25□□□□□ -0.77
SEMA4D-217ENST00000475255 ZFAND6Q6FIF0 208 aa10.25□□□□□ -0.77
SEMA4D-217ENST00000475255 SLC25A29Q8N8R3 303 aa10.25□□□□□ -0.77
SEMA4D-217ENST00000475255 KLK9Q9UKQ9 250 aa10.25□□□□□ -0.77
SEMA4D-217ENST00000475255 POLR2KP53803 58 aaKnown RBP10.24□□□□□ -0.77
SEMA4D-217ENST00000475255 AMELXQ99217 191 aa10.24□□□□□ -0.77
SEMA4D-217ENST00000475255 LYRM7Q5U5X0 104 aa10.24□□□□□ -0.77
SEMA4D-217ENST00000475255 IGHV3-73A0A0B4J1V6 119 aa10.23□□□□□ -0.77
SEMA4D-217ENST00000475255 ATP6V0E2Q8NHE4 81 aa10.23□□□□□ -0.77
SEMA4D-217ENST00000475255 CITED1Q99966 193 aa10.23□□□□□ -0.77
SEMA4D-217ENST00000475255 A0A0J9YXV3 536 aa10.23□□□□□ -0.77
SEMA4D-217ENST00000475255 LMO4P61968 165 aa10.23□□□□□ -0.77
SEMA4D-217ENST00000475255 MUSTN1Q8IVN3 82 aa10.23□□□□□ -0.77
SEMA4D-217ENST00000475255 LENEPQ9Y5L5 61 aa10.23□□□□□ -0.77
SEMA4D-217ENST00000475255 PRRC2AP48634 2157 aaKnown RBP10.23□□□□□ -0.77
SEMA4D-217ENST00000475255 VCYO14598 125 aa10.22□□□□□ -0.77
SEMA4D-217ENST00000475255 CRLF1O75462 422 aa10.22□□□□□ -0.77
SEMA4D-217ENST00000475255 SPXQ9BT56 116 aa10.22□□□□□ -0.77
SEMA4D-217ENST00000475255 K7ENP7 123 aa10.22□□□□□ -0.77
SEMA4D-217ENST00000475255 CEMP1Q6PRD7 247 aaPredicted RBP10.22□□□□□ -0.77
SEMA4D-217ENST00000475255 Q6ZSV7 163 aa10.22□□□□□ -0.77
SEMA4D-217ENST00000475255 ERG28Q9UKR5 140 aa10.22□□□□□ -0.77
SEMA4D-217ENST00000475255 TRAV4A0A0B4J268 109 aa10.22□□□□□ -0.77
SEMA4D-217ENST00000475255 FBXL19-AS1Q494R0 122 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms