RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 MUC21A0A0G2JKD1 596 aa11.14□□□□□ -0.63
SRM-204ENST00000475189 MUC21A0A140T8X8 626 aa11.14□□□□□ -0.63
SRM-204ENST00000475189 RHODO00212 210 aa11.14□□□□□ -0.63
SRM-204ENST00000475189 IGLC6P0CF74 106 aa11.14□□□□□ -0.63
SRM-204ENST00000475189 FAM74A4Q5TZK3 123 aa11.13□□□□□ -0.63
SRM-204ENST00000475189 SPANXN1Q5VSR9 72 aa11.13□□□□□ -0.63
SRM-204ENST00000475189 SH2D6Q7Z4S9 175 aa11.13□□□□□ -0.63
SRM-204ENST00000475189 C14orf178Q8N769 122 aaPredicted RBP11.13□□□□□ -0.63
SRM-204ENST00000475189 RNASE7Q9H1E1 156 aaKnown RBP11.13□□□□□ -0.63
SRM-204ENST00000475189 XKRY2A2RUG3 117 aa11.12□□□□□ -0.63
SRM-204ENST00000475189 RTL8CO15255 209 aa11.12□□□□□ -0.63
SRM-204ENST00000475189 FER1L6-AS1Q8NA97 138 aa11.12□□□□□ -0.63
SRM-204ENST00000475189 SMIM7Q9BQ49 75 aa11.12□□□□□ -0.63
SRM-204ENST00000475189 Q9UF83 564 aa11.12□□□□□ -0.63
SRM-204ENST00000475189 LY96Q9Y6Y9 160 aa11.12□□□□□ -0.63
SRM-204ENST00000475189 SSTP61278 116 aa11.11□□□□□ -0.63
SRM-204ENST00000475189 TPPP3Q9BW30 176 aa11.11□□□□□ -0.63
SRM-204ENST00000475189 ZNF727A8MUV8 499 aa11.1□□□□□ -0.63
SRM-204ENST00000475189 C9JQL5 133 aa11.1□□□□□ -0.63
SRM-204ENST00000475189 SIVA1O15304 175 aa11.1□□□□□ -0.63
SRM-204ENST00000475189 TIRAPP58753 221 aa11.1□□□□□ -0.63
SRM-204ENST00000475189 SRSF3P84103 164 aaKnown RBP11.1□□□□□ -0.63
SRM-204ENST00000475189 KRTAP1-5Q9BYS1 174 aa11.1□□□□□ -0.63
SRM-204ENST00000475189 RPP21Q9H633 154 aaKnown RBP11.1□□□□□ -0.63
SRM-204ENST00000475189 GAGE12JA6NER3 117 aa11.09□□□□□ -0.63
SRM-204ENST00000475189 LINC00694P0DN24 101 aa11.09□□□□□ -0.63
SRM-204ENST00000475189 GAGE1Q13065 139 aa11.09□□□□□ -0.63
SRM-204ENST00000475189 GAGE4Q13068 117 aa11.09□□□□□ -0.63
SRM-204ENST00000475189 GAGE5Q13069 117 aa11.09□□□□□ -0.63
SRM-204ENST00000475189 GAGE13Q4V321 117 aa11.09□□□□□ -0.63
SRM-204ENST00000475189 C1orf134Q5TEV5 83 aa11.09□□□□□ -0.63
SRM-204ENST00000475189 LYZL1Q6UWQ5 148 aa11.09□□□□□ -0.63
SRM-204ENST00000475189 FAM231DQ6ZW35 169 aa11.09□□□□□ -0.63
SRM-204ENST00000475189 ATP6V0E2Q8NHE4 81 aa11.09□□□□□ -0.63
SRM-204ENST00000475189 MSRB1Q9NZV6 116 aa11.09□□□□□ -0.63
SRM-204ENST00000475189 FAT2Q9NYQ8 4349 aa11.09□□□□□ -0.63
SRM-204ENST00000475189 A0A1W2PPQ1 181 aa11.08□□□□□ -0.64
SRM-204ENST00000475189 F2Z2F3 143 aa11.08□□□□□ -0.64
SRM-204ENST00000475189 GATCO43716 136 aaKnown RBP11.08□□□□□ -0.64
SRM-204ENST00000475189 CACNG7P62955 275 aa11.08□□□□□ -0.64
SRM-204ENST00000475189 PEA15Q15121 130 aa11.08□□□□□ -0.64
SRM-204ENST00000475189 TTC32Q5I0X7 151 aa11.08□□□□□ -0.64
SRM-204ENST00000475189 LINC00336Q6ZUF6 198 aa11.08□□□□□ -0.64
SRM-204ENST00000475189 LINC01551Q86U37 167 aa11.08□□□□□ -0.64
SRM-204ENST00000475189 KIF25-AS1Q9Y6Z4 181 aa11.08□□□□□ -0.64
SRM-204ENST00000475189 RAB4BP61018 213 aa11.07□□□□□ -0.64
SRM-204ENST00000475189 WFDC10BQ8IUB3 73 aa11.07□□□□□ -0.64
SRM-204ENST00000475189 SMDT1Q9H4I9 107 aa11.07□□□□□ -0.64
SRM-204ENST00000475189 CTRLP40313 264 aa11.06□□□□□ -0.64
SRM-204ENST00000475189 LINC00315P59091 139 aa11.06□□□□□ -0.64
SRM-204ENST00000475189 ZNF56Q15929 161 aa11.06□□□□□ -0.64
SRM-204ENST00000475189 FAM74A3Q4VXF1 159 aa11.06□□□□□ -0.64
SRM-204ENST00000475189 SOHLH1Q5JUK2 328 aa11.06□□□□□ -0.64
SRM-204ENST00000475189 WDR73Q6P4I2 378 aa11.06□□□□□ -0.64
SRM-204ENST00000475189 C6orf223Q8N319 242 aa11.06□□□□□ -0.64
SRM-204ENST00000475189 AP1S3Q96PC3 154 aa11.06□□□□□ -0.64
SRM-204ENST00000475189 GTSF1LQ9H1H1 148 aa11.06□□□□□ -0.64
SRM-204ENST00000475189 TRBV10-1A0A0K0K1A3 114 aa11.05□□□□□ -0.64
SRM-204ENST00000475189 NTF3P20783 257 aa11.05□□□□□ -0.64
SRM-204ENST00000475189 ERVFC1-1P60608 527 aa11.05□□□□□ -0.64
SRM-204ENST00000475189 TMEM241Q24JQ0 296 aa11.05□□□□□ -0.64
SRM-204ENST00000475189 GTSF1Q8WW33 167 aa11.05□□□□□ -0.64
SRM-204ENST00000475189 PRSS29PA6NIE9 313 aa11.04□□□□□ -0.64
SRM-204ENST00000475189 SMIM17P0DL12 118 aa11.04□□□□□ -0.64
SRM-204ENST00000475189 LELP1Q5T871 98 aa11.04□□□□□ -0.64
SRM-204ENST00000475189 CNFNQ9BYD5 112 aa11.04□□□□□ -0.64
SRM-204ENST00000475189 OSTCQ9NRP0 149 aa11.04□□□□□ -0.64
SRM-204ENST00000475189 A8MWL6 223 aa11.03□□□□□ -0.64
SRM-204ENST00000475189 F5H697 171 aa11.03□□□□□ -0.64
SRM-204ENST00000475189 DNAH10OSP0CZ25 163 aa11.03□□□□□ -0.64
SRM-204ENST00000475189 RAB14P61106 215 aa11.03□□□□□ -0.64
SRM-204ENST00000475189 RPL23P62829 140 aaKnown RBP11.03□□□□□ -0.64
SRM-204ENST00000475189 CT83Q5H943 113 aa11.03□□□□□ -0.64
SRM-204ENST00000475189 OR10G8Q8NGN5 311 aa11.03□□□□□ -0.64
SRM-204ENST00000475189 HECTD4Q9Y4D8 3996 aa11.03□□□□□ -0.64
SRM-204ENST00000475189 TRAV8-6A0A0B4J262 113 aa11.02□□□□□ -0.65
SRM-204ENST00000475189 TRGC1P0CF51 173 aa11.02□□□□□ -0.65
SRM-204ENST00000475189 EVI2AP22794 236 aa11.02□□□□□ -0.65
SRM-204ENST00000475189 RPL36AP83881 106 aaKnown RBP11.02□□□□□ -0.65
SRM-204ENST00000475189 IFITM2Q01629 132 aa11.02□□□□□ -0.65
SRM-204ENST00000475189 OR10J3Q5JRS4 329 aa11.02□□□□□ -0.65
SRM-204ENST00000475189 NEXN-AS1Q8NBZ9 246 aa11.02□□□□□ -0.65
SRM-204ENST00000475189 RPL36ALQ969Q0 106 aaKnown RBP11.02□□□□□ -0.65
SRM-204ENST00000475189 ISOC2Q96AB3 205 aa11.02□□□□□ -0.65
SRM-204ENST00000475189 NAT8Q9UHE5 227 aa11.02□□□□□ -0.65
SRM-204ENST00000475189 TRBV7-3A0A075B6L6 115 aa11.01□□□□□ -0.65
SRM-204ENST00000475189 IGHV3-38A0A0C4DH36 116 aa11.01□□□□□ -0.65
SRM-204ENST00000475189 A0A1B0GVY2 172 aa11.01□□□□□ -0.65
SRM-204ENST00000475189 BTF3P20290 206 aaKnown RBP11.01□□□□□ -0.65
SRM-204ENST00000475189 FOXA3P55318 350 aaPredicted RBP11.01□□□□□ -0.65
SRM-204ENST00000475189 UBE2D3P61077 147 aa11.01□□□□□ -0.65
SRM-204ENST00000475189 UBE2D2P62837 147 aa11.01□□□□□ -0.65
SRM-204ENST00000475189 TWIST1Q15672 202 aa11.01□□□□□ -0.65
SRM-204ENST00000475189 C4orf48Q5BLP8 95 aa11.01□□□□□ -0.65
SRM-204ENST00000475189 PKD1P98161 4303 aa11□□□□□ -0.65
SRM-204ENST00000475189 TRAV9-2A0A087WT02 112 aa11□□□□□ -0.65
SRM-204ENST00000475189 MGPP08493 103 aa11□□□□□ -0.65
SRM-204ENST00000475189 ADIRFQ15847 76 aa11□□□□□ -0.65
SRM-204ENST00000475189 CLLU1Q5K131 121 aa11□□□□□ -0.65
SRM-204ENST00000475189 TSKUQ8WUA8 353 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms