RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 DNAH10OSP0CZ25 163 aa12.19□□□□□ -0.46
EFNA1-204ENST00000474413 PRADC1Q9BSG0 188 aa12.19□□□□□ -0.46
EFNA1-204ENST00000474413 SSBP4Q9BWG4 385 aaPredicted RBP12.19□□□□□ -0.46
EFNA1-204ENST00000474413 PDE6DO43924 150 aa12.18□□□□□ -0.46
EFNA1-204ENST00000474413 IFNA1P01562 189 aa12.18□□□□□ -0.46
EFNA1-204ENST00000474413 SYT8Q8NBV8 401 aa12.18□□□□□ -0.46
EFNA1-204ENST00000474413 PHLDA3Q9Y5J5 127 aa12.18□□□□□ -0.46
EFNA1-204ENST00000474413 MUC21A0A0G2JKD1 596 aa12.17□□□□□ -0.46
EFNA1-204ENST00000474413 MUC21A0A140T8X8 626 aa12.17□□□□□ -0.46
EFNA1-204ENST00000474413 GZMBP10144 247 aa12.17□□□□□ -0.46
EFNA1-204ENST00000474413 ZFP82Q8N141 532 aa12.17□□□□□ -0.46
EFNA1-204ENST00000474413 RHODO00212 210 aa12.16□□□□□ -0.46
EFNA1-204ENST00000474413 OR5AL1P0C617 328 aa12.16□□□□□ -0.46
EFNA1-204ENST00000474413 GNG4P50150 75 aa12.16□□□□□ -0.46
EFNA1-204ENST00000474413 FAM74A4Q5TZK3 123 aa12.16□□□□□ -0.46
EFNA1-204ENST00000474413 SH2D6Q7Z4S9 175 aa12.16□□□□□ -0.46
EFNA1-204ENST00000474413 MED9Q9NWA0 146 aa12.16□□□□□ -0.46
EFNA1-204ENST00000474413 GAGE12JA6NER3 117 aa12.15□□□□□ -0.46
EFNA1-204ENST00000474413 K7EN84 100 aa12.15□□□□□ -0.46
EFNA1-204ENST00000474413 IGLC6P0CF74 106 aa12.15□□□□□ -0.46
EFNA1-204ENST00000474413 BTF3P20290 206 aaKnown RBP12.15□□□□□ -0.46
EFNA1-204ENST00000474413 GAGE1Q13065 139 aa12.15□□□□□ -0.46
EFNA1-204ENST00000474413 GAGE4Q13068 117 aa12.15□□□□□ -0.46
EFNA1-204ENST00000474413 GAGE5Q13069 117 aa12.15□□□□□ -0.46
EFNA1-204ENST00000474413 GAGE13Q4V321 117 aa12.15□□□□□ -0.46
EFNA1-204ENST00000474413 Q8N3U1 123 aa12.15□□□□□ -0.46
EFNA1-204ENST00000474413 SMIM12Q96EX1 92 aa12.15□□□□□ -0.46
EFNA1-204ENST00000474413 LY96Q9Y6Y9 160 aa12.15□□□□□ -0.46
EFNA1-204ENST00000474413 PCLOQ9Y6V0 5065 aa12.15□□□□□ -0.46
EFNA1-204ENST00000474413 ATP6V0E2Q8NHE4 81 aa12.14□□□□□ -0.47
EFNA1-204ENST00000474413 KIF25-AS1Q9Y6Z4 181 aa12.14□□□□□ -0.47
EFNA1-204ENST00000474413 TAGLN2P37802 199 aaKnown RBP12.13□□□□□ -0.47
EFNA1-204ENST00000474413 LELP1Q5T871 98 aa12.13□□□□□ -0.47
EFNA1-204ENST00000474413 GTSF1LQ9H1H1 148 aa12.13□□□□□ -0.47
EFNA1-204ENST00000474413 RBFOX3A6NFN3 312 aa12.12□□□□□ -0.47
EFNA1-204ENST00000474413 BLOC1S1P78537 153 aa12.12□□□□□ -0.47
EFNA1-204ENST00000474413 LINC01556Q5JQF7 62 aa12.12□□□□□ -0.47
EFNA1-204ENST00000474413 IGHV3-38A0A0C4DH36 116 aa12.11□□□□□ -0.47
EFNA1-204ENST00000474413 KRTAP10-2P60368 255 aa12.11□□□□□ -0.47
EFNA1-204ENST00000474413 OR2D3Q8NGH3 330 aa12.11□□□□□ -0.47
EFNA1-204ENST00000474413 MSRB1Q9NZV6 116 aa12.1□□□□□ -0.47
EFNA1-204ENST00000474413 ABCA13Q86UQ4 5058 aa12.09□□□□□ -0.47
EFNA1-204ENST00000474413 TMEM250H0YL14 139 aa12.09□□□□□ -0.47
EFNA1-204ENST00000474413 TOR2AQ5JU69 321 aa12.09□□□□□ -0.47
EFNA1-204ENST00000474413 FER1L6-AS1Q8NA97 138 aa12.09□□□□□ -0.47
EFNA1-204ENST00000474413 NUDT10Q8NFP7 164 aa12.09□□□□□ -0.47
EFNA1-204ENST00000474413 OCC1Q8TAD7 63 aa12.09□□□□□ -0.47
EFNA1-204ENST00000474413 NUDT11Q96G61 164 aa12.09□□□□□ -0.47
EFNA1-204ENST00000474413 EVI2AP22794 236 aa12.08□□□□□ -0.48
EFNA1-204ENST00000474413 SSTP61278 116 aa12.08□□□□□ -0.48
EFNA1-204ENST00000474413 OR10J3Q5JRS4 329 aa12.08□□□□□ -0.48
EFNA1-204ENST00000474413 SPANXN1Q5VSR9 72 aa12.08□□□□□ -0.48
EFNA1-204ENST00000474413 RNASE7Q9H1E1 156 aaKnown RBP12.08□□□□□ -0.48
EFNA1-204ENST00000474413 TRBV10-1A0A0K0K1A3 114 aa12.07□□□□□ -0.48
EFNA1-204ENST00000474413 K7EP13 123 aa12.07□□□□□ -0.48
EFNA1-204ENST00000474413 P01737 135 aa12.07□□□□□ -0.48
EFNA1-204ENST00000474413 CTRLP40313 264 aa12.07□□□□□ -0.48
EFNA1-204ENST00000474413 RAB4BP61018 213 aa12.07□□□□□ -0.48
EFNA1-204ENST00000474413 UBE2D3P61077 147 aa12.07□□□□□ -0.48
EFNA1-204ENST00000474413 UBE2D2P62837 147 aa12.07□□□□□ -0.48
EFNA1-204ENST00000474413 SPATA12Q7Z6I5 190 aa12.07□□□□□ -0.48
EFNA1-204ENST00000474413 OR10G8Q8NGN5 311 aa12.07□□□□□ -0.48
EFNA1-204ENST00000474413 FAM210AQ96ND0 272 aa12.07□□□□□ -0.48
EFNA1-204ENST00000474413 TPPP3Q9BW30 176 aa12.07□□□□□ -0.48
EFNA1-204ENST00000474413 KRTAP17-1Q9BYP8 105 aa12.07□□□□□ -0.48
EFNA1-204ENST00000474413 TRAV8-6A0A0B4J262 113 aa12.06□□□□□ -0.48
EFNA1-204ENST00000474413 IGHV3-30P01768 117 aa12.06□□□□□ -0.48
EFNA1-204ENST00000474413 IGHV3-33P01772 117 aa12.06□□□□□ -0.48
EFNA1-204ENST00000474413 IGHV3-30-3P0DP02 117 aa12.06□□□□□ -0.48
EFNA1-204ENST00000474413 IGHV3-30-5P0DP03 117 aa12.06□□□□□ -0.48
EFNA1-204ENST00000474413 RPS20P60866 119 aaKnown RBP12.06□□□□□ -0.48
EFNA1-204ENST00000474413 ZNF56Q15929 161 aa12.06□□□□□ -0.48
EFNA1-204ENST00000474413 NEXN-AS1Q8NBZ9 246 aa12.06□□□□□ -0.48
EFNA1-204ENST00000474413 IBA57-AS1B1ANH7 110 aa12.05□□□□□ -0.48
EFNA1-204ENST00000474413 FUSP35637 526 aaKnown RBP eCLIP12.05□□□□□ -0.48
EFNA1-204ENST00000474413 LYZL1Q6UWQ5 148 aa12.05□□□□□ -0.48
EFNA1-204ENST00000474413 DAZAP1Q96EP5 407 aaKnown RBP12.05□□□□□ -0.48
EFNA1-204ENST00000474413 AP1S3Q96PC3 154 aa12.05□□□□□ -0.48
EFNA1-204ENST00000474413 TRAV9-2A0A087WT02 112 aa12.04□□□□□ -0.48
EFNA1-204ENST00000474413 C16orf90A8MZG2 172 aa12.04□□□□□ -0.48
EFNA1-204ENST00000474413 C10orf126Q8N4M7 172 aa12.04□□□□□ -0.48
EFNA1-204ENST00000474413 GTSF1Q8WW33 167 aa12.04□□□□□ -0.48
EFNA1-204ENST00000474413 CNFNQ9BYD5 112 aa12.04□□□□□ -0.48
EFNA1-204ENST00000474413 RPP21Q9H633 154 aaKnown RBP12.04□□□□□ -0.48
EFNA1-204ENST00000474413 TRBV7-3A0A075B6L6 115 aa12.03□□□□□ -0.48
EFNA1-204ENST00000474413 C9JQL5 133 aa12.03□□□□□ -0.48
EFNA1-204ENST00000474413 SRP19P09132 144 aaKnown RBP12.03□□□□□ -0.48
EFNA1-204ENST00000474413 NFE4Q86UQ8 179 aa12.03□□□□□ -0.48
EFNA1-204ENST00000474413 BIN3Q9NQY0 253 aa12.03□□□□□ -0.48
EFNA1-204ENST00000474413 A0A087WTM6 91 aa12.02□□□□□ -0.49
EFNA1-204ENST00000474413 NDUFS6O75380 124 aaKnown RBP12.02□□□□□ -0.49
EFNA1-204ENST00000474413 RPL36AP83881 106 aaKnown RBP12.02□□□□□ -0.49
EFNA1-204ENST00000474413 TEX261Q6UWH6 196 aa12.02□□□□□ -0.49
EFNA1-204ENST00000474413 DAZ4Q86SG3 579 aaKnown RBP12.02□□□□□ -0.49
EFNA1-204ENST00000474413 RPL36ALQ969Q0 106 aaKnown RBP12.02□□□□□ -0.49
EFNA1-204ENST00000474413 DAZ3Q9NR90 486 aaKnown RBP12.02□□□□□ -0.49
EFNA1-204ENST00000474413 LRCOL1A6NCL2 159 aa12.01□□□□□ -0.49
EFNA1-204ENST00000474413 M0QY20 66 aa12.01□□□□□ -0.49
EFNA1-204ENST00000474413 CEBPGP53567 150 aa12.01□□□□□ -0.49
EFNA1-204ENST00000474413 CACNG7P62955 275 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms