RNA–Protein interactions for RNA: ENST00000474311.1

NEPRO-215, Transcript of nucleolus and neural progenitor protein, human

TSL 2

Gene NEPRO, Length 1,671 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-215	ENST00000474311	IFI27L1	Q96BM0	104 aa		4.1	□□□□□ -1.75
NEPRO-215	ENST00000474311	MGST2	Q99735	147 aa		4.1	□□□□□ -1.75
NEPRO-215	ENST00000474311	CDC42SE1	Q9NRR8	79 aa		4.1	□□□□□ -1.75
NEPRO-215	ENST00000474311	LAMB2	P55268	1798 aa		4.1	□□□□□ -1.75
NEPRO-215	ENST00000474311	COL2A1	P02458	1487 aa	Predicted RBP	4.1	□□□□□ -1.75
NEPRO-215	ENST00000474311	TNS1	Q9HBL0	1735 aa	Known RBP	4.1	□□□□□ -1.75
NEPRO-215	ENST00000474311	IGHV3-33	P01772	117 aa		4.1	□□□□□ -1.75
NEPRO-215	ENST00000474311	ELOB	Q15370	118 aa		4.1	□□□□□ -1.75
NEPRO-215	ENST00000474311		Q5BKY6	102 aa		4.1	□□□□□ -1.75
NEPRO-215	ENST00000474311	SPACA4	Q8TDM5	124 aa		4.1	□□□□□ -1.75
NEPRO-215	ENST00000474311	C22orf24	Q9Y442	160 aa		4.1	□□□□□ -1.75
NEPRO-215	ENST00000474311	SHANK2	Q9UPX8	1470 aa		4.09	□□□□□ -1.75
NEPRO-215	ENST00000474311	HEATR1	Q9H583	2144 aa	Known RBP	4.09	□□□□□ -1.75
NEPRO-215	ENST00000474311	PPL	O60437	1756 aa		4.09	□□□□□ -1.75
NEPRO-215	ENST00000474311		A0A1W2PNU3	283 aa	Predicted RBP	4.09	□□□□□ -1.76
NEPRO-215	ENST00000474311	CCL16	O15467	120 aa		4.09	□□□□□ -1.76
NEPRO-215	ENST00000474311	SERP2	Q8N6R1	65 aa		4.09	□□□□□ -1.76
NEPRO-215	ENST00000474311	AMELY	Q99218	206 aa		4.09	□□□□□ -1.76
NEPRO-215	ENST00000474311	CYP4F30P	Q9H0H9	118 aa		4.09	□□□□□ -1.76
NEPRO-215	ENST00000474311	CACFD1	Q9UGQ2	172 aa		4.09	□□□□□ -1.76
NEPRO-215	ENST00000474311	ARHGEF12	Q9NZN5	1544 aa		4.09	□□□□□ -1.76
NEPRO-215	ENST00000474311	COL4A5	P29400	1685 aa		4.08	□□□□□ -1.76
NEPRO-215	ENST00000474311	PSME4	Q14997	1843 aa		4.08	□□□□□ -1.76
NEPRO-215	ENST00000474311	TRAV12-3	A0A0B4J271	114 aa		4.08	□□□□□ -1.76
NEPRO-215	ENST00000474311	PLIN4	Q96Q06	1357 aa		4.08	□□□□□ -1.76
NEPRO-215	ENST00000474311	EPRS	P07814	1512 aa	Known RBP	4.08	□□□□□ -1.76
NEPRO-215	ENST00000474311	RGPD4	Q7Z3J3	1758 aa		4.07	□□□□□ -1.76
NEPRO-215	ENST00000474311	PATJ	Q8NI35	1801 aa		4.07	□□□□□ -1.76
NEPRO-215	ENST00000474311	SH2D6	Q7Z4S9	175 aa		4.06	□□□□□ -1.76
NEPRO-215	ENST00000474311	MYOF	Q9NZM1	2061 aa		4.06	□□□□□ -1.76
NEPRO-215	ENST00000474311	TRBV6-8	A0A0A6YYG3	113 aa		4.06	□□□□□ -1.76
NEPRO-215	ENST00000474311	SIX6	O95475	246 aa		4.06	□□□□□ -1.76
NEPRO-215	ENST00000474311	DEFA5	Q01523	94 aa		4.06	□□□□□ -1.76
NEPRO-215	ENST00000474311	PATE1	Q8WXA2	126 aa		4.06	□□□□□ -1.76
NEPRO-215	ENST00000474311	TRGV9	Q99603	122 aa		4.06	□□□□□ -1.76
NEPRO-215	ENST00000474311	LIMD2	Q9BT23	127 aa		4.06	□□□□□ -1.76
NEPRO-215	ENST00000474311	SPCS1	Q9Y6A9	102 aa		4.06	□□□□□ -1.76
NEPRO-215	ENST00000474311	DIP2B	Q9P265	1576 aa		4.05	□□□□□ -1.76
NEPRO-215	ENST00000474311	PTPRD	P23468	1912 aa		4.05	□□□□□ -1.76
NEPRO-215	ENST00000474311	COL1A2	P08123	1366 aa		4.05	□□□□□ -1.76
NEPRO-215	ENST00000474311	SMCO4	Q9NRQ5	59 aa		4.05	□□□□□ -1.76
NEPRO-215	ENST00000474311	ORMDL1	Q9P0S3	153 aa		4.05	□□□□□ -1.76
NEPRO-215	ENST00000474311	RABAC1	Q9UI14	185 aa		4.05	□□□□□ -1.76
NEPRO-215	ENST00000474311	CASP8AP2	Q9UKL3	1982 aa		4.05	□□□□□ -1.76
NEPRO-215	ENST00000474311	SHANK1	Q9Y566	2161 aa		4.05	□□□□□ -1.76
NEPRO-215	ENST00000474311	CLIP1	P30622	1438 aa		4.05	□□□□□ -1.76
NEPRO-215	ENST00000474311	TET3	O43151	1660 aa		4.04	□□□□□ -1.76
NEPRO-215	ENST00000474311	ADAMTS7	Q9UKP4	1686 aa		4.04	□□□□□ -1.76
NEPRO-215	ENST00000474311	ADAMTS9	Q9P2N4	1935 aa		4.04	□□□□□ -1.76
NEPRO-215	ENST00000474311	TRBV10-1	A0A0K0K1A3	114 aa		4.04	□□□□□ -1.76
NEPRO-215	ENST00000474311	SYS1-DBNDD2	H3BUS1	97 aa		4.04	□□□□□ -1.76
NEPRO-215	ENST00000474311	KRTAP10-11	P60412	298 aa		4.04	□□□□□ -1.76
NEPRO-215	ENST00000474311	ODF3	Q96PU9	254 aa		4.04	□□□□□ -1.76
NEPRO-215	ENST00000474311	ST20	Q9HBF5	79 aa		4.04	□□□□□ -1.76
NEPRO-215	ENST00000474311	GPR179	Q6PRD1	2367 aa		4.04	□□□□□ -1.76
NEPRO-215	ENST00000474311	MYO18A	Q92614	2054 aa	Known RBP	4.04	□□□□□ -1.76
NEPRO-215	ENST00000474311	ADAMTS12	P58397	1594 aa		4.04	□□□□□ -1.76
NEPRO-215	ENST00000474311	TRBV7-1	A0A0A6YYK4	115 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311	ADIRF	Q15847	76 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311	MPV17L	Q2QL34	196 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311	KRTAP13-2	Q52LG2	175 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311	TEX49	A0A1B0GTD5	131 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311		A0A1W2PNN7	141 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311		H3BRM9	83 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311	PDCD5	O14737	125 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311	GAS8-AS1	O95177	125 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311	ETDB	Q3ZM63	59 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311	LCE1F	Q5T754	118 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311	NDUFA11	Q86Y39	141 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311	NXT2	Q9NPJ8	142 aa	Known RBP	4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311	MANBAL	Q9NQG1	85 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311	KIF20B	Q96Q89	1820 aa		4.03	□□□□□ -1.76
NEPRO-215	ENST00000474311	MED13	Q9UHV7	2174 aa		4.02	□□□□□ -1.77
NEPRO-215	ENST00000474311	PXDN	Q92626	1479 aa		4.02	□□□□□ -1.77
NEPRO-215	ENST00000474311	MRPL36	Q9P0J6	103 aa	Known RBP	4.02	□□□□□ -1.77
NEPRO-215	ENST00000474311	RGPD3	A6NKT7	1758 aa	Predicted RBP	4.01	□□□□□ -1.77
NEPRO-215	ENST00000474311	TCHH	Q07283	1943 aa		4.01	□□□□□ -1.77
NEPRO-215	ENST00000474311	IGKV2-28	A0A075B6P5	120 aa		4.01	□□□□□ -1.77
NEPRO-215	ENST00000474311	NDUFC1	O43677	76 aa		4.01	□□□□□ -1.77
NEPRO-215	ENST00000474311	IGKV2D-28	P01615	120 aa		4.01	□□□□□ -1.77
NEPRO-215	ENST00000474311	HOXB6	P17509	224 aa	Known RBP	4.01	□□□□□ -1.77
NEPRO-215	ENST00000474311	MPDZ	O75970	2070 aa		4.01	□□□□□ -1.77
NEPRO-215	ENST00000474311	NUPR2	A6NF83	97 aa		4	□□□□□ -1.77
NEPRO-215	ENST00000474311		A8MU10	97 aa		4	□□□□□ -1.77
NEPRO-215	ENST00000474311	IGLV6-57	P01721	117 aa		4	□□□□□ -1.77
NEPRO-215	ENST00000474311	UBE2D1	P51668	147 aa		4	□□□□□ -1.77
NEPRO-215	ENST00000474311	C4orf3	Q8WVX3	66 aa		4	□□□□□ -1.77
NEPRO-215	ENST00000474311	DMAC1	Q96GE9	116 aa		4	□□□□□ -1.77
NEPRO-215	ENST00000474311	TANC1	Q9C0D5	1861 aa		4	□□□□□ -1.77
NEPRO-215	ENST00000474311	IGKV3-7	A0A075B6H7	116 aa		4	□□□□□ -1.77
NEPRO-215	ENST00000474311		A0A1W2PPM0	123 aa		4	□□□□□ -1.77
NEPRO-215	ENST00000474311	SDHAF1	A6NFY7	115 aa		4	□□□□□ -1.77
NEPRO-215	ENST00000474311	C10orf128	Q5T292	105 aa		4	□□□□□ -1.77
NEPRO-215	ENST00000474311	HIGD1B	Q9P298	99 aa		4	□□□□□ -1.77
NEPRO-215	ENST00000474311	NLRP1	Q9C000	1473 aa		3.99	□□□□□ -1.77
NEPRO-215	ENST00000474311	NWD2	Q9ULI1	1742 aa		3.99	□□□□□ -1.77
NEPRO-215	ENST00000474311		A0A0J9YY99	117 aa		3.99	□□□□□ -1.77
NEPRO-215	ENST00000474311	CYP2G1P	Q6ZSU1	146 aa		3.99	□□□□□ -1.77
NEPRO-215	ENST00000474311	UNC13C	Q8NB66	2214 aa		3.99	□□□□□ -1.77
NEPRO-215	ENST00000474311	EDC4	Q6P2E9	1401 aa	Known RBP	3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms