RNA–Protein interactions for RNA: ENST00000474311.1

NEPRO-215, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 1,671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-215ENST00000474311 AEBP2Q6ZN18 517 aaPredicted RBP20.77■□□□□ 0.92
NEPRO-215ENST00000474311 CHIC1Q5VXU3 224 aa19.7■□□□□ 0.74
NEPRO-215ENST00000474311 SENP3Q9H4L4 574 aaPredicted RBP17.78■□□□□ 0.44
NEPRO-215ENST00000474311 PHF23Q9BUL5 403 aaPredicted RBP17.52■□□□□ 0.39
NEPRO-215ENST00000474311 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
NEPRO-215ENST00000474311 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
NEPRO-215ENST00000474311 FOXD1Q16676 465 aa16.55■□□□□ 0.24
NEPRO-215ENST00000474311 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
NEPRO-215ENST00000474311 KCNA4P22459 653 aa16.18■□□□□ 0.18
NEPRO-215ENST00000474311 CSRNP3Q8WYN3 585 aa16.08■□□□□ 0.16
NEPRO-215ENST00000474311 RTN4Q9NQC3 1192 aaKnown RBP15.86■□□□□ 0.13
NEPRO-215ENST00000474311 AMER1Q5JTC6 1135 aaPredicted RBP15.68■□□□□ 0.1
NEPRO-215ENST00000474311 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
NEPRO-215ENST00000474311 MSH5O43196 834 aa15.56■□□□□ 0.08
NEPRO-215ENST00000474311 ADRA2BP18089 450 aa15.52■□□□□ 0.08
NEPRO-215ENST00000474311 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
NEPRO-215ENST00000474311 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
NEPRO-215ENST00000474311 POTEDQ86YR6 584 aa15.25■□□□□ 0.03
NEPRO-215ENST00000474311 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
NEPRO-215ENST00000474311 ZBTB22O15209 634 aa14.98□□□□□ -0.01
NEPRO-215ENST00000474311 PRKCSHP14314 528 aaPredicted RBP14.76□□□□□ -0.05
NEPRO-215ENST00000474311 PPP4R3CPQ6ZMV5 832 aa14.73□□□□□ -0.05
NEPRO-215ENST00000474311 DAXXQ9UER7 740 aaPredicted RBP14.65□□□□□ -0.06
NEPRO-215ENST00000474311 NPM3O75607 178 aaKnown RBP14.61□□□□□ -0.07
NEPRO-215ENST00000474311 TAOK2Q9UL54 1235 aa14.49□□□□□ -0.09
NEPRO-215ENST00000474311 BCANQ96GW7 911 aa14.45□□□□□ -0.1
NEPRO-215ENST00000474311 PLCB2Q00722 1185 aa14.43□□□□□ -0.1
NEPRO-215ENST00000474311 FKBP8Q14318 412 aa14.4□□□□□ -0.1
NEPRO-215ENST00000474311 FOXD4L1Q9NU39 408 aa14.35□□□□□ -0.11
NEPRO-215ENST00000474311 HAP1P54257 671 aaPredicted RBP14.25□□□□□ -0.13
NEPRO-215ENST00000474311 TPRNQ4KMQ1 711 aa14.23□□□□□ -0.13
NEPRO-215ENST00000474311 TIMELESSQ9UNS1 1208 aa14.23□□□□□ -0.13
NEPRO-215ENST00000474311 ARXQ96QS3 562 aa14.22□□□□□ -0.13
NEPRO-215ENST00000474311 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
NEPRO-215ENST00000474311 MAPK8IP2Q13387 824 aaPredicted RBP14.1□□□□□ -0.15
NEPRO-215ENST00000474311 DMRT2Q9Y5R5 561 aa14.09□□□□□ -0.15
NEPRO-215ENST00000474311 TULP1O00294 542 aaPredicted RBP14.08□□□□□ -0.16
NEPRO-215ENST00000474311 VSIG10Q8N0Z9 540 aa14.01□□□□□ -0.17
NEPRO-215ENST00000474311 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
NEPRO-215ENST00000474311 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
NEPRO-215ENST00000474311 HOMEZQ8IX15 550 aa13.82□□□□□ -0.2
NEPRO-215ENST00000474311 DNAJC5BQ9UF47 199 aa13.82□□□□□ -0.2
NEPRO-215ENST00000474311 KDM2AQ9Y2K7 1162 aa13.79□□□□□ -0.2
NEPRO-215ENST00000474311 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
NEPRO-215ENST00000474311 FBLN2P98095 1184 aa13.68□□□□□ -0.22
NEPRO-215ENST00000474311 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
NEPRO-215ENST00000474311 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
NEPRO-215ENST00000474311 HOXD11P31277 338 aaPredicted RBP13.56□□□□□ -0.24
NEPRO-215ENST00000474311 TMEM132AQ24JP5 1023 aa13.53□□□□□ -0.24
NEPRO-215ENST00000474311 RANGAP1P46060 587 aaPredicted RBP13.48□□□□□ -0.25
NEPRO-215ENST00000474311 SLC4A2P04920 1241 aa13.46□□□□□ -0.26
NEPRO-215ENST00000474311 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
NEPRO-215ENST00000474311 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
NEPRO-215ENST00000474311 C14orf37Q86TY3 774 aa13.41□□□□□ -0.26
NEPRO-215ENST00000474311 PAXIP1Q6ZW49 1069 aaPredicted RBP13.39□□□□□ -0.27
NEPRO-215ENST00000474311 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.38□□□□□ -0.27
NEPRO-215ENST00000474311 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
NEPRO-215ENST00000474311 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
NEPRO-215ENST00000474311 PKD2Q13563 968 aa13.36□□□□□ -0.27
NEPRO-215ENST00000474311 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
NEPRO-215ENST00000474311 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
NEPRO-215ENST00000474311 CFAP44Q96MT7 982 aa13.34□□□□□ -0.27
NEPRO-215ENST00000474311 FBXO3Q9UK99 471 aa13.34□□□□□ -0.27
NEPRO-215ENST00000474311 NBR1Q14596 966 aa13.27□□□□□ -0.29
NEPRO-215ENST00000474311 TSHZ2Q9NRE2 1034 aa13.27□□□□□ -0.29
NEPRO-215ENST00000474311 NPM1P06748 294 aaKnown RBP eCLIP13.25□□□□□ -0.29
NEPRO-215ENST00000474311 RNF39Q9H2S5 420 aa13.25□□□□□ -0.29
NEPRO-215ENST00000474311 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.29
NEPRO-215ENST00000474311 IFNLR1Q8IU57 520 aaPredicted RBP13.21□□□□□ -0.29
NEPRO-215ENST00000474311 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
NEPRO-215ENST00000474311 SUPT5HO00267 1087 aaKnown RBP13.1□□□□□ -0.31
NEPRO-215ENST00000474311 SPRYD3Q8NCJ5 442 aa13.1□□□□□ -0.31
NEPRO-215ENST00000474311 C1QBPQ07021 282 aaKnown RBP13.08□□□□□ -0.31
NEPRO-215ENST00000474311 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.31
NEPRO-215ENST00000474311 DNAJC5Q9H3Z4 198 aa13.07□□□□□ -0.32
NEPRO-215ENST00000474311 NPM2Q86SE8 214 aaKnown RBP13.02□□□□□ -0.32
NEPRO-215ENST00000474311 TRIM26Q12899 539 aaPredicted RBP12.96□□□□□ -0.33
NEPRO-215ENST00000474311 ECM2O94769 699 aaPredicted RBP12.94□□□□□ -0.34
NEPRO-215ENST00000474311 UBTFP17480 764 aaKnown RBP12.92□□□□□ -0.34
NEPRO-215ENST00000474311 PROM2Q8N271 834 aa12.92□□□□□ -0.34
NEPRO-215ENST00000474311 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
NEPRO-215ENST00000474311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.35
NEPRO-215ENST00000474311 APLP2Q06481 763 aa12.86□□□□□ -0.35
NEPRO-215ENST00000474311 RGL2O15211 777 aa12.83□□□□□ -0.35
NEPRO-215ENST00000474311 HRCP23327 699 aa12.82□□□□□ -0.36
NEPRO-215ENST00000474311 CHGAP10645 457 aaKnown RBP12.71□□□□□ -0.37
NEPRO-215ENST00000474311 SPOCK2Q92563 424 aa12.7□□□□□ -0.38
NEPRO-215ENST00000474311 BRPF1P55201 1214 aaPredicted RBP12.68□□□□□ -0.38
NEPRO-215ENST00000474311 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
NEPRO-215ENST00000474311 PELP1Q8IZL8 1130 aaKnown RBP12.57□□□□□ -0.4
NEPRO-215ENST00000474311 TRHP20396 242 aaPredicted RBP12.56□□□□□ -0.4
NEPRO-215ENST00000474311 MKRN4PQ13434 485 aaPredicted RBP12.55□□□□□ -0.4
NEPRO-215ENST00000474311 ZNF219Q9P2Y4 722 aaPredicted RBP12.54□□□□□ -0.4
NEPRO-215ENST00000474311 SAMD1Q6SPF0 538 aaPredicted RBP12.53□□□□□ -0.4
NEPRO-215ENST00000474311 LMOD2Q6P5Q4 547 aa12.46□□□□□ -0.41
NEPRO-215ENST00000474311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
NEPRO-215ENST00000474311 NEUROD2Q15784 382 aa12.45□□□□□ -0.42
NEPRO-215ENST00000474311 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
NEPRO-215ENST00000474311 HS6ST3Q8IZP7 471 aa12.45□□□□□ -0.42
NEPRO-215ENST00000474311 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms