RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542		A0A087WTM6	91 aa		0.46	□□□□□ -2.34
BBX-223	ENST00000473542	TRAV12-3	A0A0B4J271	114 aa		0.46	□□□□□ -2.34
BBX-223	ENST00000473542		F2Z2F3	143 aa		0.46	□□□□□ -2.34
BBX-223	ENST00000473542	NPC2	P61916	151 aa		0.46	□□□□□ -2.34
BBX-223	ENST00000473542	PRR15L	Q9BU68	103 aa		0.46	□□□□□ -2.34
BBX-223	ENST00000473542	BPESC1	Q9GZL8	116 aa		0.46	□□□□□ -2.34
BBX-223	ENST00000473542	PAIP2B	Q9ULR5	123 aa	Known RBP	0.46	□□□□□ -2.34
BBX-223	ENST00000473542	KDM6B	O15054	1643 aa		0.46	□□□□□ -2.34
BBX-223	ENST00000473542	NPFF	O15130	113 aa		0.45	□□□□□ -2.34
BBX-223	ENST00000473542	PITX3	O75364	302 aa		0.45	□□□□□ -2.34
BBX-223	ENST00000473542	FAM74A4	Q5TZK3	123 aa		0.45	□□□□□ -2.34
BBX-223	ENST00000473542	SLC48A1	Q6P1K1	146 aa		0.45	□□□□□ -2.34
BBX-223	ENST00000473542		Q6ZUT4	128 aa		0.45	□□□□□ -2.34
BBX-223	ENST00000473542	VIRMA	Q69YN4	1812 aa	Known RBP	0.45	□□□□□ -2.34
BBX-223	ENST00000473542	LAMB1	P07942	1786 aa		0.45	□□□□□ -2.34
BBX-223	ENST00000473542		K7ERU9	68 aa		0.44	□□□□□ -2.34
BBX-223	ENST00000473542	PIRT	P0C851	137 aa		0.44	□□□□□ -2.34
BBX-223	ENST00000473542	COX4I1	P13073	169 aa		0.44	□□□□□ -2.34
BBX-223	ENST00000473542	COX7B2	Q8TF08	81 aa		0.44	□□□□□ -2.34
BBX-223	ENST00000473542	PROK2	Q9HC23	129 aa		0.44	□□□□□ -2.34
BBX-223	ENST00000473542	ABCA4	P78363	2273 aa		0.44	□□□□□ -2.34
BBX-223	ENST00000473542	MDN1	Q9NU22	5596 aa		0.44	□□□□□ -2.34
BBX-223	ENST00000473542	RRAS2	P62070	204 aa	Predicted RBP	0.43	□□□□□ -2.34
BBX-223	ENST00000473542	C9orf116	Q5BN46	136 aa	Predicted RBP	0.43	□□□□□ -2.34
BBX-223	ENST00000473542	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		0.43	□□□□□ -2.34
BBX-223	ENST00000473542	C4orf33	Q8N1A6	199 aa		0.43	□□□□□ -2.34
BBX-223	ENST00000473542	C20orf197	Q8N268	126 aa		0.43	□□□□□ -2.34
BBX-223	ENST00000473542	TSTD1	Q8NFU3	115 aa		0.43	□□□□□ -2.34
BBX-223	ENST00000473542	PSMG3	Q9BT73	122 aa	Predicted RBP	0.43	□□□□□ -2.34
BBX-223	ENST00000473542	TNC	P24821	2201 aa		0.43	□□□□□ -2.34
BBX-223	ENST00000473542	DAPK1	P53355	1430 aa		0.43	□□□□□ -2.34
BBX-223	ENST00000473542	TNS1	Q9HBL0	1735 aa	Known RBP	0.43	□□□□□ -2.34
BBX-223	ENST00000473542	PLXNA1	Q9UIW2	1896 aa		0.43	□□□□□ -2.34
BBX-223	ENST00000473542	MYH13	Q9UKX3	1938 aa		0.42	□□□□□ -2.34
BBX-223	ENST00000473542	LAMC3	Q9Y6N6	1575 aa		0.42	□□□□□ -2.34
BBX-223	ENST00000473542	SOGA1	O94964	1423 aa		0.42	□□□□□ -2.34
BBX-223	ENST00000473542		M0R129	80 aa		0.42	□□□□□ -2.34
BBX-223	ENST00000473542	GUCA1A	P43080	201 aa	Predicted RBP	0.42	□□□□□ -2.34
BBX-223	ENST00000473542	RPS25	P62851	125 aa	Known RBP	0.42	□□□□□ -2.34
BBX-223	ENST00000473542	SMIM11B	Q8TCY0	68 aa		0.42	□□□□□ -2.34
BBX-223	ENST00000473542	TCEAL4	Q96EI5	215 aa		0.42	□□□□□ -2.34
BBX-223	ENST00000473542	PFDN5	Q99471	154 aa		0.42	□□□□□ -2.34
BBX-223	ENST00000473542	USP24	Q9UPU5	2620 aa		0.41	□□□□□ -2.34
BBX-223	ENST00000473542	GVQW2	A0A096LPI5	108 aa	Predicted RBP	0.41	□□□□□ -2.34
BBX-223	ENST00000473542	COPZ1	P61923	177 aa		0.41	□□□□□ -2.34
BBX-223	ENST00000473542	TMEM191A	Q9H0A3	160 aa		0.41	□□□□□ -2.34
BBX-223	ENST00000473542	RPRM	Q9NS64	109 aa		0.41	□□□□□ -2.34
BBX-223	ENST00000473542		V9GYV3	84 aa		0.41	□□□□□ -2.34
BBX-223	ENST00000473542	PIP	P12273	146 aa	Predicted RBP	0.4	□□□□□ -2.35
BBX-223	ENST00000473542	TMEM242	Q9NWH2	141 aa		0.4	□□□□□ -2.35
BBX-223	ENST00000473542	BDP1	A6H8Y1	2624 aa		0.4	□□□□□ -2.35
BBX-223	ENST00000473542	NRXN2	Q9P2S2	1712 aa		0.39	□□□□□ -2.35
BBX-223	ENST00000473542	IFNA17	P01571	189 aa		0.39	□□□□□ -2.35
BBX-223	ENST00000473542		Q96NJ1	140 aa		0.39	□□□□□ -2.35
BBX-223	ENST00000473542	TPT1P8	Q9HAU6	139 aa		0.39	□□□□□ -2.35
BBX-223	ENST00000473542	CACNA1E	Q15878	2313 aa		0.39	□□□□□ -2.35
BBX-223	ENST00000473542	ABCA1	O95477	2261 aa		0.38	□□□□□ -2.35
BBX-223	ENST00000473542	MUC22	E2RYF6	1773 aa	Predicted RBP	0.38	□□□□□ -2.35
BBX-223	ENST00000473542	UNC13B	O14795	1591 aa		0.38	□□□□□ -2.35
BBX-223	ENST00000473542	TRBV7-1	A0A0A6YYK4	115 aa		0.38	□□□□□ -2.35
BBX-223	ENST00000473542		A6NIN4	97 aa		0.38	□□□□□ -2.35
BBX-223	ENST00000473542	IL5	P05113	134 aa		0.38	□□□□□ -2.35
BBX-223	ENST00000473542	RPL7L1	Q6DKI1	246 aa	Known RBP	0.38	□□□□□ -2.35
BBX-223	ENST00000473542	SDF2	Q99470	211 aa		0.38	□□□□□ -2.35
BBX-223	ENST00000473542	AKAP11	Q9UKA4	1901 aa		0.38	□□□□□ -2.35
BBX-223	ENST00000473542	PHIP	Q8WWQ0	1821 aa		0.38	□□□□□ -2.35
BBX-223	ENST00000473542	MYOM3	Q5VTT5	1437 aa		0.38	□□□□□ -2.35
BBX-223	ENST00000473542	APOD	P05090	189 aa		0.37	□□□□□ -2.35
BBX-223	ENST00000473542	CCDC167	Q9P0B6	97 aa		0.37	□□□□□ -2.35
BBX-223	ENST00000473542	SCP2D1	Q9UJQ7	156 aa		0.37	□□□□□ -2.35
BBX-223	ENST00000473542	JMJD1C	Q15652	2540 aa		0.36	□□□□□ -2.35
BBX-223	ENST00000473542	NDUFB6	O95139	128 aa		0.36	□□□□□ -2.35
BBX-223	ENST00000473542	CBLN1	P23435	193 aa		0.36	□□□□□ -2.35
BBX-223	ENST00000473542	UBE2D1	P51668	147 aa		0.36	□□□□□ -2.35
BBX-223	ENST00000473542	KCNRG	Q8N5I3	272 aa		0.36	□□□□□ -2.35
BBX-223	ENST00000473542	SPTSSA	Q969W0	71 aa		0.36	□□□□□ -2.35
BBX-223	ENST00000473542	MYH6	P13533	1939 aa		0.36	□□□□□ -2.35
BBX-223	ENST00000473542	GRIN2A	Q12879	1464 aa		0.35	□□□□□ -2.35
BBX-223	ENST00000473542	UBE2G1	P62253	170 aa		0.35	□□□□□ -2.35
BBX-223	ENST00000473542	S100A12	P80511	92 aa		0.35	□□□□□ -2.35
BBX-223	ENST00000473542	ZNF818P	Q6ZRF7	136 aa		0.35	□□□□□ -2.35
BBX-223	ENST00000473542	C10orf82	Q8WW14	230 aa		0.35	□□□□□ -2.35
BBX-223	ENST00000473542	SSC5D	A1L4H1	1573 aa		0.35	□□□□□ -2.35
BBX-223	ENST00000473542	EDDM3B	P56851	147 aa		0.34	□□□□□ -2.36
BBX-223	ENST00000473542	IBTK	Q9P2D0	1353 aa	Predicted RBP	0.33	□□□□□ -2.36
BBX-223	ENST00000473542	MED13L	Q71F56	2210 aa		0.33	□□□□□ -2.36
BBX-223	ENST00000473542	CLPSL1	A2RUU4	121 aa		0.33	□□□□□ -2.36
BBX-223	ENST00000473542	ACYP2	P14621	99 aa		0.33	□□□□□ -2.36
BBX-223	ENST00000473542	KIAA0100	Q14667	2235 aa	Known RBP	0.33	□□□□□ -2.36
BBX-223	ENST00000473542	TMEM14DP	A8MWL7	114 aa		0.32	□□□□□ -2.36
BBX-223	ENST00000473542	INSL4	Q14641	139 aa		0.32	□□□□□ -2.36
BBX-223	ENST00000473542	DPH3	Q96FX2	82 aa		0.32	□□□□□ -2.36
BBX-223	ENST00000473542	PARP14	Q460N5	1801 aa		0.31	□□□□□ -2.36
BBX-223	ENST00000473542	NAV2	Q8IVL1	2488 aa		0.31	□□□□□ -2.36
BBX-223	ENST00000473542	ZNF518A	Q6AHZ1	1483 aa		0.31	□□□□□ -2.36
BBX-223	ENST00000473542	SNCG	O76070	127 aa		0.31	□□□□□ -2.36
BBX-223	ENST00000473542	ARPC4	P59998	168 aa		0.31	□□□□□ -2.36
BBX-223	ENST00000473542	CCL8	P80075	99 aa		0.31	□□□□□ -2.36
BBX-223	ENST00000473542	COX6A2	Q02221	97 aa		0.31	□□□□□ -2.36
BBX-223	ENST00000473542		Q6ZRX8	168 aa		0.31	□□□□□ -2.36

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