RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 ERVFC1-1P60608 527 aa15.24■□□□□ 0.03
PTP4A1-203ENST00000473334 RPL19P84098 196 aaKnown RBP15.24■□□□□ 0.03
PTP4A1-203ENST00000473334 GAGE1Q13065 139 aa15.24■□□□□ 0.03
PTP4A1-203ENST00000473334 GAGE4Q13068 117 aa15.24■□□□□ 0.03
PTP4A1-203ENST00000473334 GAGE5Q13069 117 aa15.24■□□□□ 0.03
PTP4A1-203ENST00000473334 GAGE13Q4V321 117 aa15.24■□□□□ 0.03
PTP4A1-203ENST00000473334 FAM74A4Q5TZK3 123 aa15.24■□□□□ 0.03
PTP4A1-203ENST00000473334 C14orf178Q8N769 122 aaPredicted RBP15.24■□□□□ 0.03
PTP4A1-203ENST00000473334 PRR27Q6MZM9 219 aa15.23■□□□□ 0.03
PTP4A1-203ENST00000473334 AKAP14Q86UN6 197 aa15.23■□□□□ 0.03
PTP4A1-203ENST00000473334 A0A087WWL8 130 aa15.22■□□□□ 0.03
PTP4A1-203ENST00000473334 EREGO14944 169 aa15.22■□□□□ 0.03
PTP4A1-203ENST00000473334 DERL1Q9BUN8 251 aa15.22■□□□□ 0.03
PTP4A1-203ENST00000473334 DNAH5Q8TE73 4624 aa15.22■□□□□ 0.03
PTP4A1-203ENST00000473334 Q9UF83 564 aa15.21■□□□□ 0.03
PTP4A1-203ENST00000473334 hCG_2014768A0A024R1R8 64 aa15.2■□□□□ 0.02
PTP4A1-203ENST00000473334 CDK2AP2O75956 126 aa15.2■□□□□ 0.02
PTP4A1-203ENST00000473334 IFNA1P01562 189 aa15.2■□□□□ 0.02
PTP4A1-203ENST00000473334 SNAI2O43623 268 aa15.19■□□□□ 0.02
PTP4A1-203ENST00000473334 MEF2BQ02080 365 aaPredicted RBP15.19■□□□□ 0.02
PTP4A1-203ENST00000473334 CENPWQ5EE01 88 aa15.19■□□□□ 0.02
PTP4A1-203ENST00000473334 KRTAP17-1Q9BYP8 105 aa15.19■□□□□ 0.02
PTP4A1-203ENST00000473334 HSPG2P98160 4391 aa15.19■□□□□ 0.02
PTP4A1-203ENST00000473334 IBA57-AS1B1ANH7 110 aa15.18■□□□□ 0.02
PTP4A1-203ENST00000473334 PDE6DO43924 150 aa15.18■□□□□ 0.02
PTP4A1-203ENST00000473334 IGHV3-30P01768 117 aa15.18■□□□□ 0.02
PTP4A1-203ENST00000473334 IGHV3-33P01772 117 aa15.18■□□□□ 0.02
PTP4A1-203ENST00000473334 IGHV3-30-3P0DP02 117 aa15.18■□□□□ 0.02
PTP4A1-203ENST00000473334 IGHV3-30-5P0DP03 117 aa15.18■□□□□ 0.02
PTP4A1-203ENST00000473334 C9orf62Q8N4C0 152 aa15.18■□□□□ 0.02
PTP4A1-203ENST00000473334 OR10AG1Q8NH19 301 aa15.18■□□□□ 0.02
PTP4A1-203ENST00000473334 A0A087WTM6 91 aa15.17■□□□□ 0.02
PTP4A1-203ENST00000473334 OR5AL1P0C617 328 aa15.17■□□□□ 0.02
PTP4A1-203ENST00000473334 BCL2P10415 239 aa15.17■□□□□ 0.02
PTP4A1-203ENST00000473334 SSBP4Q9BWG4 385 aaPredicted RBP15.17■□□□□ 0.02
PTP4A1-203ENST00000473334 A0A087WWC5 75 aa15.16■□□□□ 0.02
PTP4A1-203ENST00000473334 PGPEP1Q9NXJ5 209 aa15.16■□□□□ 0.02
PTP4A1-203ENST00000473334 PCLOQ9Y6V0 5065 aa15.16■□□□□ 0.02
PTP4A1-203ENST00000473334 APOBP04114 4563 aaKnown RBP15.16■□□□□ 0.02
PTP4A1-203ENST00000473334 TRBV10-1A0A0K0K1A3 114 aa15.15■□□□□ 0.02
PTP4A1-203ENST00000473334 IGLV2-8P01709 118 aa15.15■□□□□ 0.02
PTP4A1-203ENST00000473334 SPANXN1Q5VSR9 72 aa15.15■□□□□ 0.02
PTP4A1-203ENST00000473334 SMIM12Q96EX1 92 aa15.15■□□□□ 0.02
PTP4A1-203ENST00000473334 VAX2Q9UIW0 290 aa15.15■□□□□ 0.02
PTP4A1-203ENST00000473334 RAB19A4D1S5 217 aa15.14■□□□□ 0.01
PTP4A1-203ENST00000473334 GNG4P50150 75 aa15.14■□□□□ 0.01
PTP4A1-203ENST00000473334 CDPF1Q6NVV7 123 aa15.14■□□□□ 0.01
PTP4A1-203ENST00000473334 DAZAP1Q96EP5 407 aaKnown RBP15.14■□□□□ 0.01
PTP4A1-203ENST00000473334 MED9Q9NWA0 146 aa15.14■□□□□ 0.01
PTP4A1-203ENST00000473334 PSCAO43653 123 aa15.13■□□□□ 0.01
PTP4A1-203ENST00000473334 TAGLN2P37802 199 aaKnown RBP15.13■□□□□ 0.01
PTP4A1-203ENST00000473334 RAB4BP61018 213 aa15.13■□□□□ 0.01
PTP4A1-203ENST00000473334 RPL36AP83881 106 aaKnown RBP15.13■□□□□ 0.01
PTP4A1-203ENST00000473334 LAGE3Q14657 143 aa15.13■□□□□ 0.01
PTP4A1-203ENST00000473334 ZNF56Q15929 161 aa15.13■□□□□ 0.01
PTP4A1-203ENST00000473334 RPL36ALQ969Q0 106 aaKnown RBP15.13■□□□□ 0.01
PTP4A1-203ENST00000473334 Q9HAA7 133 aa15.13■□□□□ 0.01
PTP4A1-203ENST00000473334 MUC21A0A0G2JKD1 596 aa15.12■□□□□ 0.01
PTP4A1-203ENST00000473334 MUC21A0A140T8X8 626 aa15.12■□□□□ 0.01
PTP4A1-203ENST00000473334 C19orf71A6NCJ1 209 aa15.11■□□□□ 0.01
PTP4A1-203ENST00000473334 RPS20P60866 119 aaKnown RBP15.11■□□□□ 0.01
PTP4A1-203ENST00000473334 Q8N3U1 123 aa15.11■□□□□ 0.01
PTP4A1-203ENST00000473334 TRBV20OR9-2A0A075B6H5 130 aa15.1■□□□□ 0.01
PTP4A1-203ENST00000473334 TRBV7-3A0A075B6L6 115 aa15.1■□□□□ 0.01
PTP4A1-203ENST00000473334 FUSP35637 526 aaKnown RBP eCLIP15.1■□□□□ 0.011e-7■□□□□ 9.6
PTP4A1-203ENST00000473334 UBE2D3P61077 147 aa15.1■□□□□ 0.01
PTP4A1-203ENST00000473334 UBE2D2P62837 147 aa15.1■□□□□ 0.01
PTP4A1-203ENST00000473334 OR2D3Q8NGH3 330 aa15.1■□□□□ 0.01
PTP4A1-203ENST00000473334 OR10G8Q8NGN5 311 aa15.1■□□□□ 0.01
PTP4A1-203ENST00000473334 GZMBP10144 247 aa15.09■□□□□ 0.01
PTP4A1-203ENST00000473334 SSTP61278 116 aa15.09■□□□□ 0.01
PTP4A1-203ENST00000473334 ALKAL2Q6UX46 152 aa15.09■□□□□ 0.01
PTP4A1-203ENST00000473334 AP1S3Q96PC3 154 aa15.09■□□□□ 0.01
PTP4A1-203ENST00000473334 BIN3Q9NQY0 253 aa15.09■□□□□ 0.01
PTP4A1-203ENST00000473334 IGLC6P0CF74 106 aa15.08■□□□□ 0
PTP4A1-203ENST00000473334 FER1L6-AS1Q8NA97 138 aa15.08■□□□□ 0
PTP4A1-203ENST00000473334 TPPP3Q9BW30 176 aa15.08■□□□□ 0
PTP4A1-203ENST00000473334 XKRY2A2RUG3 117 aa15.07■□□□□ 0
PTP4A1-203ENST00000473334 LRCOL1A6NCL2 159 aa15.07■□□□□ 0
PTP4A1-203ENST00000473334 P01737 135 aa15.07■□□□□ 0
PTP4A1-203ENST00000473334 SMIM17P0DL12 118 aa15.07■□□□□ 0
PTP4A1-203ENST00000473334 BLOC1S1P78537 153 aa15.07■□□□□ 0
PTP4A1-203ENST00000473334 TOR2AQ5JU69 321 aa15.07■□□□□ 0
PTP4A1-203ENST00000473334 DAZ4Q86SG3 579 aaKnown RBP15.07■□□□□ 0
PTP4A1-203ENST00000473334 NEXN-AS1Q8NBZ9 246 aa15.07■□□□□ 0
PTP4A1-203ENST00000473334 DAZ3Q9NR90 486 aaKnown RBP15.07■□□□□ 0
PTP4A1-203ENST00000473334 RBFOX3A6NFN3 312 aa15.06■□□□□ 0
PTP4A1-203ENST00000473334 F5H697 171 aa15.06■□□□□ 0
PTP4A1-203ENST00000473334 NIT1Q86X76 327 aa15.06■□□□□ 0
PTP4A1-203ENST00000473334 MAPKAPK5-AS1Q8N8E1 139 aa15.06■□□□□ 0
PTP4A1-203ENST00000473334 KIF25-AS1Q9Y6Z4 181 aa15.06■□□□□ 0
PTP4A1-203ENST00000473334 URGCP-MRPS24S4R325 110 aa15.06■□□□□ 0
PTP4A1-203ENST00000473334 TRAV8-3A0A0A6YYJ7 113 aa15.05■□□□□ -0
PTP4A1-203ENST00000473334 TM2D2Q9BX73 214 aa15.05■□□□□ -0
PTP4A1-203ENST00000473334 CACNG7P62955 275 aa15.04■□□□□ -0
PTP4A1-203ENST00000473334 ABCA13Q86UQ4 5058 aa15.03■□□□□ -0
PTP4A1-203ENST00000473334 CHCHD7Q9BUK0 85 aa15.03■□□□□ -0
PTP4A1-203ENST00000473334 F2Z2F3 143 aa15.02■□□□□ -0
PTP4A1-203ENST00000473334 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.02■□□□□ -0
PTP4A1-203ENST00000473334 NUDT10Q8NFP7 164 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms