RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 COA6Q5JTJ3 125 aaKnown RBP4.26□□□□□ -1.73
EPHA4-212ENST00000472696 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.26□□□□□ -1.73
EPHA4-212ENST00000472696 PRR27Q6MZM9 219 aa4.26□□□□□ -1.73
EPHA4-212ENST00000472696 RASL11AQ6T310 242 aa4.26□□□□□ -1.73
EPHA4-212ENST00000472696 C1orf158Q8N1D5 194 aa4.26□□□□□ -1.73
EPHA4-212ENST00000472696 ORAOV1Q8WV07 137 aa4.26□□□□□ -1.73
EPHA4-212ENST00000472696 HIST1H2BHQ93079 126 aa4.26□□□□□ -1.73
EPHA4-212ENST00000472696 HIST1H2BNQ99877 126 aa4.26□□□□□ -1.73
EPHA4-212ENST00000472696 HIST1H2BMQ99879 126 aa4.26□□□□□ -1.73
EPHA4-212ENST00000472696 B9D2Q9BPU9 175 aa4.26□□□□□ -1.73
EPHA4-212ENST00000472696 SSBP4Q9BWG4 385 aaPredicted RBP4.26□□□□□ -1.73
EPHA4-212ENST00000472696 NAT8BQ9UHF3 227 aa4.26□□□□□ -1.73
EPHA4-212ENST00000472696 IGKV3D-20A0A0C4DH25 116 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 SNAI2O43623 268 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 NPSP0C0P6 89 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 TRGC1P0CF51 173 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 S100A4P26447 101 aaKnown RBP4.25□□□□□ -1.73
EPHA4-212ENST00000472696 ASIPP42127 132 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 CACNG7P62955 275 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 HERV-K104P63124 156 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 ZNF415Q09FC8 603 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 DAZ2Q13117 558 aaKnown RBP4.25□□□□□ -1.73
EPHA4-212ENST00000472696 OR5I1Q13606 314 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 DEFB121Q5J5C9 76 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 PRR9Q5T870 116 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 ATP5L2Q7Z4Y8 100 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 MRAPQ8TCY5 172 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 FRZBQ92765 325 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 BORCS7Q96B45 105 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 C18orf15Q96N68 181 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 HIST1H2BLQ99880 126 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 TM2D3Q9BRN9 247 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 OVOL2Q9BRP0 275 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 CNFNQ9BYD5 112 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 RNASE7Q9H1E1 156 aaKnown RBP4.25□□□□□ -1.73
EPHA4-212ENST00000472696 NOTCH3Q9UM47 2321 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 V9GYV3 84 aa4.25□□□□□ -1.73
EPHA4-212ENST00000472696 IGHV4-4A0A075B6R2 117 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 SMIM27A0A1W2PRY6 76 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 LYRM9A8MSI8 78 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 SNURFLB1AK76 121 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 TYMSP04818 313 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 IGLC6P0CF74 106 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 TCL1AP56279 114 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 FXYD7P58549 80 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 KIR3DS1Q14943 382 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 ELOBQ15370 118 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 MRPL23Q16540 153 aaKnown RBP4.24□□□□□ -1.73
EPHA4-212ENST00000472696 BOD1L2Q8IYS8 172 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 FER1L6-AS1Q8NA97 138 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 SYT8Q8NBV8 401 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 OR11H2Q8NH07 326 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 RASL10AQ92737 203 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 C9orf85Q96MD7 179 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 MIEN1Q9BRT3 115 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 C11orf68Q9H3H3 251 aaKnown RBP4.24□□□□□ -1.73
EPHA4-212ENST00000472696 SCRT2Q9NQ03 307 aa4.24□□□□□ -1.73
EPHA4-212ENST00000472696 TIMM8BQ9Y5J9 83 aaPredicted RBP4.24□□□□□ -1.73
EPHA4-212ENST00000472696 TRBV24-1A0A075B6N3 115 aa4.23□□□□□ -1.73
EPHA4-212ENST00000472696 IGHV3-16A0A0C4DH30 117 aa4.23□□□□□ -1.73
EPHA4-212ENST00000472696 HIGD1CA8MV81 97 aa4.23□□□□□ -1.73
EPHA4-212ENST00000472696 H3BS24 57 aa4.23□□□□□ -1.73
EPHA4-212ENST00000472696 M0R2P5 195 aa4.23□□□□□ -1.73
EPHA4-212ENST00000472696 TRGC2P03986 189 aa4.23□□□□□ -1.73
EPHA4-212ENST00000472696 RBMY1A1P0DJD3 496 aaKnown RBP4.23□□□□□ -1.73
EPHA4-212ENST00000472696 RBMY1CP0DJD4 496 aa4.23□□□□□ -1.73
EPHA4-212ENST00000472696 RNASE3P12724 160 aaKnown RBP4.23□□□□□ -1.73
EPHA4-212ENST00000472696 CTRLP40313 264 aa4.23□□□□□ -1.73
EPHA4-212ENST00000472696 RBMY1FQ15415 496 aaKnown RBP4.23□□□□□ -1.73
EPHA4-212ENST00000472696 DEFB135Q30KP9 77 aa4.23□□□□□ -1.73
EPHA4-212ENST00000472696 MUC21Q5SSG8 566 aa4.23□□□□□ -1.73
EPHA4-212ENST00000472696 C11orf72Q8NBR9 251 aa4.23□□□□□ -1.73
EPHA4-212ENST00000472696 C11orf21Q9P2W6 132 aa4.23□□□□□ -1.73
EPHA4-212ENST00000472696 PHLDA3Q9Y5J5 127 aa4.23□□□□□ -1.73
EPHA4-212ENST00000472696 IGHV3OR16-12A0A075B7B8 117 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 A0A1B0GUT8 65 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 A8MWV9 139 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 TMEM238C9JI98 176 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 GNRH2O43555 120 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 SPINK4O60575 86 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 NXPH4O95158 308 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 ARMS2P0C7Q2 107 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 SPART-AS1P0CW21 52 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 RIGQ13278 110 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 UBE2V1Q13404 147 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 SPANXN1Q5VSR9 72 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 ZNF575Q86XF7 245 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 SBSPONQ8IVN8 264 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 Q8NAQ8 132 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 NUP35Q8NFH5 326 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 IL17DQ8TAD2 202 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 GTSF1Q8WW33 167 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 VPS25Q9BRG1 176 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 PKD1L1Q8TDX9 2849 aa4.22□□□□□ -1.73
EPHA4-212ENST00000472696 DNAH9Q9NYC9 4486 aa4.21□□□□□ -1.73
EPHA4-212ENST00000472696 RHODO00212 210 aa4.21□□□□□ -1.74
EPHA4-212ENST00000472696 MT-ND6P03923 174 aa4.21□□□□□ -1.74
EPHA4-212ENST00000472696 PRB4P10163 310 aaPredicted RBP4.21□□□□□ -1.74
EPHA4-212ENST00000472696 HTN1P15515 57 aa4.21□□□□□ -1.74
EPHA4-212ENST00000472696 ZNF876PQ49A33 203 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms