RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 UFSP1Q6NVU6 142 aa9.82□□□□□ -0.84
BRCA1-211ENST00000472490 FAM231DQ6ZW35 169 aa9.82□□□□□ -0.84
BRCA1-211ENST00000472490 SAMD10Q9BYL1 202 aa9.82□□□□□ -0.84
BRCA1-211ENST00000472490 RNASE7Q9H1E1 156 aaKnown RBP9.82□□□□□ -0.84
BRCA1-211ENST00000472490 JPT2Q9H910 190 aa9.82□□□□□ -0.84
BRCA1-211ENST00000472490 DYNC2H1Q8NCM8 4307 aaKnown RBP9.82□□□□□ -0.84
BRCA1-211ENST00000472490 LYSTQ99698 3801 aa9.81□□□□□ -0.84
BRCA1-211ENST00000472490 A0A087WWL8 130 aa9.81□□□□□ -0.84
BRCA1-211ENST00000472490 CRYGDP07320 174 aa9.81□□□□□ -0.84
BRCA1-211ENST00000472490 GZMBP10144 247 aa9.81□□□□□ -0.84
BRCA1-211ENST00000472490 TMEM241Q24JQ0 296 aa9.81□□□□□ -0.84
BRCA1-211ENST00000472490 LYPD5Q6UWN5 251 aa9.81□□□□□ -0.84
BRCA1-211ENST00000472490 LINC01551Q86U37 167 aa9.81□□□□□ -0.84
BRCA1-211ENST00000472490 AP1S3Q96PC3 154 aa9.81□□□□□ -0.84
BRCA1-211ENST00000472490 PGPEP1Q9NXJ5 209 aa9.81□□□□□ -0.84
BRCA1-211ENST00000472490 A8MWL6 223 aa9.8□□□□□ -0.84
BRCA1-211ENST00000472490 M0R2N4 97 aa9.8□□□□□ -0.84
BRCA1-211ENST00000472490 GATCO43716 136 aaKnown RBP9.8□□□□□ -0.84
BRCA1-211ENST00000472490 TTC32Q5I0X7 151 aa9.8□□□□□ -0.84
BRCA1-211ENST00000472490 SOHLH1Q5JUK2 328 aa9.8□□□□□ -0.84
BRCA1-211ENST00000472490 WDR73Q6P4I2 378 aa9.8□□□□□ -0.84
BRCA1-211ENST00000472490 MUC21A0A0G2JKD1 596 aa9.79□□□□□ -0.84
BRCA1-211ENST00000472490 LOC100131303A0A0U1RQF7 123 aa9.79□□□□□ -0.84
BRCA1-211ENST00000472490 MUC21A0A140T8X8 626 aa9.79□□□□□ -0.84
BRCA1-211ENST00000472490 TRGC1P0CF51 173 aa9.79□□□□□ -0.84
BRCA1-211ENST00000472490 TIRAPP58753 221 aa9.79□□□□□ -0.84
BRCA1-211ENST00000472490 RAB4BP61018 213 aa9.79□□□□□ -0.84
BRCA1-211ENST00000472490 SSTP61278 116 aa9.79□□□□□ -0.84
BRCA1-211ENST00000472490 CT83Q5H943 113 aa9.79□□□□□ -0.84
BRCA1-211ENST00000472490 C15orf54Q8N8G6 183 aa9.79□□□□□ -0.84
BRCA1-211ENST00000472490 NAT8Q9UHE5 227 aa9.79□□□□□ -0.84
BRCA1-211ENST00000472490 RYR3Q15413 4870 aa9.78□□□□□ -0.84
BRCA1-211ENST00000472490 TRBV10-1A0A0K0K1A3 114 aa9.78□□□□□ -0.84
BRCA1-211ENST00000472490 NBDYA0A0U1RRE5 68 aa9.78□□□□□ -0.84
BRCA1-211ENST00000472490 SIVA1O15304 175 aa9.78□□□□□ -0.84
BRCA1-211ENST00000472490 ZNF56Q15929 161 aa9.78□□□□□ -0.84
BRCA1-211ENST00000472490 CLLU1Q5K131 121 aa9.78□□□□□ -0.84
BRCA1-211ENST00000472490 LYZL1Q6UWQ5 148 aa9.78□□□□□ -0.84
BRCA1-211ENST00000472490 Q6ZR54 194 aa9.78□□□□□ -0.84
BRCA1-211ENST00000472490 Q6ZSN1 163 aa9.78□□□□□ -0.84
BRCA1-211ENST00000472490 C14orf178Q8N769 122 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-211ENST00000472490 ATP6V0E2Q8NHE4 81 aa9.78□□□□□ -0.84
BRCA1-211ENST00000472490 OSTCQ9NRP0 149 aa9.78□□□□□ -0.84
BRCA1-211ENST00000472490 MUC4Q99102 2169 aa9.78□□□□□ -0.84
BRCA1-211ENST00000472490 C9JQL5 133 aa9.77□□□□□ -0.85
BRCA1-211ENST00000472490 F5H697 171 aa9.77□□□□□ -0.85
BRCA1-211ENST00000472490 NTF3P20783 257 aa9.77□□□□□ -0.85
BRCA1-211ENST00000472490 CTRLP40313 264 aa9.77□□□□□ -0.85
BRCA1-211ENST00000472490 SRSF3P84103 164 aaKnown RBP9.77□□□□□ -0.85
BRCA1-211ENST00000472490 BORCS7Q96B45 105 aa9.77□□□□□ -0.85
BRCA1-211ENST00000472490 SACSQ9NZJ4 4579 aa9.77□□□□□ -0.85
BRCA1-211ENST00000472490 ALMS1Q8TCU4 4167 aa9.77□□□□□ -0.85
BRCA1-211ENST00000472490 TRAV9-2A0A087WT02 112 aa9.76□□□□□ -0.85
BRCA1-211ENST00000472490 TRAV8-6A0A0B4J262 113 aa9.76□□□□□ -0.85
BRCA1-211ENST00000472490 GAGE12JA6NER3 117 aa9.76□□□□□ -0.85
BRCA1-211ENST00000472490 K7EP13 123 aa9.76□□□□□ -0.85
BRCA1-211ENST00000472490 RPL36AP83881 106 aaKnown RBP9.76□□□□□ -0.85
BRCA1-211ENST00000472490 GAGE1Q13065 139 aa9.76□□□□□ -0.85
BRCA1-211ENST00000472490 GAGE4Q13068 117 aa9.76□□□□□ -0.85
BRCA1-211ENST00000472490 GAGE5Q13069 117 aa9.76□□□□□ -0.85
BRCA1-211ENST00000472490 TWIST1Q15672 202 aa9.76□□□□□ -0.85
BRCA1-211ENST00000472490 GAGE13Q4V321 117 aa9.76□□□□□ -0.85
BRCA1-211ENST00000472490 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-211ENST00000472490 RPL36ALQ969Q0 106 aaKnown RBP9.76□□□□□ -0.85
BRCA1-211ENST00000472490 CNFNQ9BYD5 112 aa9.76□□□□□ -0.85
BRCA1-211ENST00000472490 GFRA4Q9GZZ7 299 aa9.76□□□□□ -0.85
BRCA1-211ENST00000472490 GTSF1LQ9H1H1 148 aa9.76□□□□□ -0.85
BRCA1-211ENST00000472490 RYR2Q92736 4967 aa9.75□□□□□ -0.85
BRCA1-211ENST00000472490 FAM231BA6NCW3 169 aa9.75□□□□□ -0.85
BRCA1-211ENST00000472490 H7C1H1 209 aa9.75□□□□□ -0.85
BRCA1-211ENST00000472490 BTF3P20290 206 aaKnown RBP9.75□□□□□ -0.85
BRCA1-211ENST00000472490 FOXA3P55318 350 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-211ENST00000472490 RPL23P62829 140 aaKnown RBP9.75□□□□□ -0.85
BRCA1-211ENST00000472490 ADIRFQ15847 76 aa9.75□□□□□ -0.85
BRCA1-211ENST00000472490 C1orf134Q5TEV5 83 aa9.75□□□□□ -0.85
BRCA1-211ENST00000472490 LINC00336Q6ZUF6 198 aa9.75□□□□□ -0.85
BRCA1-211ENST00000472490 SMIM15Q7Z3B0 74 aa9.75□□□□□ -0.85
BRCA1-211ENST00000472490 TSKUQ8WUA8 353 aa9.75□□□□□ -0.85
BRCA1-211ENST00000472490 ISOC2Q96AB3 205 aa9.75□□□□□ -0.85
BRCA1-211ENST00000472490 TRBV7-3A0A075B6L6 115 aa9.74□□□□□ -0.85
BRCA1-211ENST00000472490 A0A087WWC5 75 aa9.74□□□□□ -0.85
BRCA1-211ENST00000472490 GTSF1Q8WW33 167 aa9.74□□□□□ -0.85
BRCA1-211ENST00000472490 MSRB1Q9NZV6 116 aa9.74□□□□□ -0.85
BRCA1-211ENST00000472490 MGPP08493 103 aa9.73□□□□□ -0.85
BRCA1-211ENST00000472490 LINC00694P0DN24 101 aa9.73□□□□□ -0.85
BRCA1-211ENST00000472490 EVI2AP22794 236 aa9.73□□□□□ -0.85
BRCA1-211ENST00000472490 OR10J3Q5JRS4 329 aa9.73□□□□□ -0.85
BRCA1-211ENST00000472490 LELP1Q5T871 98 aa9.73□□□□□ -0.85
BRCA1-211ENST00000472490 OR10G8Q8NGN5 311 aa9.73□□□□□ -0.85
BRCA1-211ENST00000472490 DPH3P1Q9H4G8 78 aa9.73□□□□□ -0.85
BRCA1-211ENST00000472490 KIF25-AS1Q9Y6Z4 181 aa9.73□□□□□ -0.85
BRCA1-211ENST00000472490 IGHV3-38A0A0C4DH36 116 aa9.72□□□□□ -0.85
BRCA1-211ENST00000472490 IFITM2Q01629 132 aa9.72□□□□□ -0.85
BRCA1-211ENST00000472490 C6orf223Q8N319 242 aa9.72□□□□□ -0.85
BRCA1-211ENST00000472490 PGLYRP4Q96LB8 373 aa9.72□□□□□ -0.85
BRCA1-211ENST00000472490 HYDINQ4G0P3 5121 aa9.71□□□□□ -0.85
BRCA1-211ENST00000472490 HIGD1CA8MV81 97 aa9.71□□□□□ -0.86
BRCA1-211ENST00000472490 DNAH10OSP0CZ25 163 aa9.71□□□□□ -0.86
BRCA1-211ENST00000472490 PNRC1Q12796 327 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-211ENST00000472490 UQCC3Q6UW78 93 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms