RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 SPANXN1Q5VSR9 72 aa12.25□□□□□ -0.45
VPS72-204ENST00000471423 RPP21Q9H633 154 aaKnown RBP12.25□□□□□ -0.45
VPS72-204ENST00000471423 IFITM2Q01629 132 aa12.24□□□□□ -0.45
VPS72-204ENST00000471423 Q6ZSN1 163 aa12.24□□□□□ -0.45
VPS72-204ENST00000471423 NEGR1Q7Z3B1 354 aa12.24□□□□□ -0.45
VPS72-204ENST00000471423 LINC01551Q86U37 167 aa12.24□□□□□ -0.45
VPS72-204ENST00000471423 ZNRF2Q8NHG8 242 aa12.24□□□□□ -0.45
VPS72-204ENST00000471423 PRADC1Q9BSG0 188 aa12.24□□□□□ -0.45
VPS72-204ENST00000471423 CRYGDP07320 174 aa12.23□□□□□ -0.45
VPS72-204ENST00000471423 SMDT1Q9H4I9 107 aa12.23□□□□□ -0.45
VPS72-204ENST00000471423 MRPS16Q9Y3D3 137 aaKnown RBP12.23□□□□□ -0.45
VPS72-204ENST00000471423 M0R2N4 97 aa12.22□□□□□ -0.45
VPS72-204ENST00000471423 FAM74A3Q4VXF1 159 aa12.22□□□□□ -0.45
VPS72-204ENST00000471423 FAM231DQ6ZW35 169 aa12.22□□□□□ -0.45
VPS72-204ENST00000471423 GATCO43716 136 aaKnown RBP12.21□□□□□ -0.45
VPS72-204ENST00000471423 ERVFC1-1P60608 527 aa12.21□□□□□ -0.45
VPS72-204ENST00000471423 LYZL1Q6UWQ5 148 aa12.21□□□□□ -0.45
VPS72-204ENST00000471423 C14orf178Q8N769 122 aaPredicted RBP12.21□□□□□ -0.45
VPS72-204ENST00000471423 UPK3BQ9BT76 320 aa12.21□□□□□ -0.45
VPS72-204ENST00000471423 A0A1W2PPQ1 181 aa12.2□□□□□ -0.46
VPS72-204ENST00000471423 TMEM241Q24JQ0 296 aa12.2□□□□□ -0.46
VPS72-204ENST00000471423 CLLU1Q5K131 121 aa12.2□□□□□ -0.46
VPS72-204ENST00000471423 LYPD5Q6UWN5 251 aa12.2□□□□□ -0.46
VPS72-204ENST00000471423 AP1S3Q96PC3 154 aa12.2□□□□□ -0.46
VPS72-204ENST00000471423 F2Z2F3 143 aa12.19□□□□□ -0.46
VPS72-204ENST00000471423 CTRLP40313 264 aa12.19□□□□□ -0.46
VPS72-204ENST00000471423 CACNG7P62955 275 aa12.19□□□□□ -0.46
VPS72-204ENST00000471423 ZNF56Q15929 161 aa12.19□□□□□ -0.46
VPS72-204ENST00000471423 Q9H8V8 135 aa12.19□□□□□ -0.46
VPS72-204ENST00000471423 MSRB1Q9NZV6 116 aa12.19□□□□□ -0.46
VPS72-204ENST00000471423 EPPK1P58107 5090 aaKnown RBP12.18□□□□□ -0.46
VPS72-204ENST00000471423 RPL23P62829 140 aaKnown RBP12.18□□□□□ -0.46
VPS72-204ENST00000471423 ADIRFQ15847 76 aa12.18□□□□□ -0.46
VPS72-204ENST00000471423 SOHLH1Q5JUK2 328 aa12.18□□□□□ -0.46
VPS72-204ENST00000471423 Q6ZR54 194 aa12.18□□□□□ -0.46
VPS72-204ENST00000471423 SH2D6Q7Z4S9 175 aa12.18□□□□□ -0.46
VPS72-204ENST00000471423 Q9UF83 564 aa12.18□□□□□ -0.46
VPS72-204ENST00000471423 NAT8Q9UHE5 227 aa12.18□□□□□ -0.46
VPS72-204ENST00000471423 FRAS1Q86XX4 4008 aa12.18□□□□□ -0.46
VPS72-204ENST00000471423 GAGE12JA6NER3 117 aa12.17□□□□□ -0.46
VPS72-204ENST00000471423 GAGE1Q13065 139 aa12.17□□□□□ -0.46
VPS72-204ENST00000471423 GAGE4Q13068 117 aa12.17□□□□□ -0.46
VPS72-204ENST00000471423 GAGE5Q13069 117 aa12.17□□□□□ -0.46
VPS72-204ENST00000471423 GAGE13Q4V321 117 aa12.17□□□□□ -0.46
VPS72-204ENST00000471423 CT83Q5H943 113 aa12.17□□□□□ -0.46
VPS72-204ENST00000471423 GTSF1Q8WW33 167 aa12.17□□□□□ -0.46
VPS72-204ENST00000471423 ISOC2Q96AB3 205 aa12.17□□□□□ -0.46
VPS72-204ENST00000471423 OSTCQ9NRP0 149 aa12.17□□□□□ -0.46
VPS72-204ENST00000471423 NBDYA0A0U1RRE5 68 aa12.16□□□□□ -0.46
VPS72-204ENST00000471423 A8MWL6 223 aa12.16□□□□□ -0.46
VPS72-204ENST00000471423 SMIM17P0DL12 118 aa12.16□□□□□ -0.46
VPS72-204ENST00000471423 LINC00694P0DN24 101 aa12.16□□□□□ -0.46
VPS72-204ENST00000471423 RAB4BP61018 213 aa12.16□□□□□ -0.46
VPS72-204ENST00000471423 KIF25-AS1Q9Y6Z4 181 aa12.16□□□□□ -0.46
VPS72-204ENST00000471423 FAT2Q9NYQ8 4349 aa12.16□□□□□ -0.46
VPS72-204ENST00000471423 NTF3P20783 257 aa12.15□□□□□ -0.46
VPS72-204ENST00000471423 C15orf54Q8N8G6 183 aa12.15□□□□□ -0.46
VPS72-204ENST00000471423 ATP6V0E2Q8NHE4 81 aa12.15□□□□□ -0.46
VPS72-204ENST00000471423 CNFNQ9BYD5 112 aa12.15□□□□□ -0.46
VPS72-204ENST00000471423 F5H697 171 aa12.14□□□□□ -0.47
VPS72-204ENST00000471423 SIVA1O15304 175 aa12.14□□□□□ -0.47
VPS72-204ENST00000471423 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
VPS72-204ENST00000471423 LINC00315P59091 139 aa12.14□□□□□ -0.47
VPS72-204ENST00000471423 WDR73Q6P4I2 378 aa12.14□□□□□ -0.47
VPS72-204ENST00000471423 V9GYV3 84 aa12.14□□□□□ -0.47
VPS72-204ENST00000471423 DNAH17Q9UFH2 4485 aa12.13□□□□□ -0.47
VPS72-204ENST00000471423 MGPP08493 103 aa12.13□□□□□ -0.47
VPS72-204ENST00000471423 EVI2AP22794 236 aa12.13□□□□□ -0.47
VPS72-204ENST00000471423 TIRAPP58753 221 aa12.13□□□□□ -0.47
VPS72-204ENST00000471423 TWIST1Q15672 202 aa12.13□□□□□ -0.47
VPS72-204ENST00000471423 WFDC10BQ8IUB3 73 aa12.13□□□□□ -0.47
VPS72-204ENST00000471423 TSKUQ8WUA8 353 aa12.13□□□□□ -0.47
VPS72-204ENST00000471423 PGLYRP4Q96LB8 373 aa12.13□□□□□ -0.47
VPS72-204ENST00000471423 KRTAP1-5Q9BYS1 174 aa12.13□□□□□ -0.47
VPS72-204ENST00000471423 TRBV10-1A0A0K0K1A3 114 aa12.12□□□□□ -0.47
VPS72-204ENST00000471423 GTSF1LQ9H1H1 148 aa12.12□□□□□ -0.47
VPS72-204ENST00000471423 RPL36AP83881 106 aaKnown RBP12.11□□□□□ -0.47
VPS72-204ENST00000471423 TTC32Q5I0X7 151 aa12.11□□□□□ -0.47
VPS72-204ENST00000471423 OR10G8Q8NGN5 311 aa12.11□□□□□ -0.47
VPS72-204ENST00000471423 RPL36ALQ969Q0 106 aaKnown RBP12.11□□□□□ -0.47
VPS72-204ENST00000471423 GFRA4Q9GZZ7 299 aa12.11□□□□□ -0.47
VPS72-204ENST00000471423 HIGD1CA8MV81 97 aa12.1□□□□□ -0.47
VPS72-204ENST00000471423 FOXA3P55318 350 aaPredicted RBP12.1□□□□□ -0.47
VPS72-204ENST00000471423 NEXN-AS1Q8NBZ9 246 aa12.1□□□□□ -0.47
VPS72-204ENST00000471423 DPH3P1Q9H4G8 78 aa12.1□□□□□ -0.47
VPS72-204ENST00000471423 FAM231BA6NCW3 169 aa12.09□□□□□ -0.47
VPS72-204ENST00000471423 RTL8CO15255 209 aa12.09□□□□□ -0.47
VPS72-204ENST00000471423 OR10J3Q5JRS4 329 aa12.09□□□□□ -0.47
VPS72-204ENST00000471423 LELP1Q5T871 98 aa12.09□□□□□ -0.47
VPS72-204ENST00000471423 C1orf134Q5TEV5 83 aa12.09□□□□□ -0.47
VPS72-204ENST00000471423 BORCS7Q96B45 105 aa12.09□□□□□ -0.47
VPS72-204ENST00000471423 TRBV7-3A0A075B6L6 115 aa12.08□□□□□ -0.48
VPS72-204ENST00000471423 UBE2D3P61077 147 aa12.08□□□□□ -0.48
VPS72-204ENST00000471423 UBE2D2P62837 147 aa12.08□□□□□ -0.48
VPS72-204ENST00000471423 SUMO4Q6EEV6 95 aa12.08□□□□□ -0.48
VPS72-204ENST00000471423 TRAV8-6A0A0B4J262 113 aa12.07□□□□□ -0.48
VPS72-204ENST00000471423 A0A1B0GUT8 65 aa12.06□□□□□ -0.48
VPS72-204ENST00000471423 H7C1H1 209 aa12.06□□□□□ -0.48
VPS72-204ENST00000471423 M0QY20 66 aa12.06□□□□□ -0.48
VPS72-204ENST00000471423 DNAH10OSP0CZ25 163 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms