RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 PRADC1Q9BSG0 188 aa10.55□□□□□ -0.72
GPC1-208ENST00000469694 MOB4Q9Y3A3 225 aa10.55□□□□□ -0.72
GPC1-208ENST00000469694 IGHV3OR16-13A0A075B7E8 117 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 IGHV3-74A0A0B4J1X5 117 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 ZNF815PA8K554 130 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 RHODO00212 210 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 SLC25A16P16260 332 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 RPL7P18124 248 aaKnown RBP10.54□□□□□ -0.72
GPC1-208ENST00000469694 DSCR9P59020 149 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 SHISA2Q6UWI4 295 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 ANKRD29Q8N6D5 301 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 FAM110DQ8TAY7 271 aaPredicted RBP10.54□□□□□ -0.72
GPC1-208ENST00000469694 PLEKHB2Q96CS7 222 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 ITPR3Q14573 2671 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 TRBV7-9A0A0J9YWB2 115 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 CLEC3BP05452 202 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 NDUFA11Q86Y39 141 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 NEXN-AS1Q8NBZ9 246 aa10.54□□□□□ -0.72
GPC1-208ENST00000469694 IGHV3-66A0A0C4DH42 116 aa10.53□□□□□ -0.72
GPC1-208ENST00000469694 SCGB1D4Q6XE38 83 aa10.53□□□□□ -0.72
GPC1-208ENST00000469694 IGKV3D-20A0A0C4DH25 116 aa10.53□□□□□ -0.72
GPC1-208ENST00000469694 CLEC19AQ6UXS0 136 aa10.53□□□□□ -0.72
GPC1-208ENST00000469694 LINC01356Q8N9X3 169 aa10.53□□□□□ -0.72
GPC1-208ENST00000469694 FAM110AQ9BQ89 295 aa10.53□□□□□ -0.72
GPC1-208ENST00000469694 H3BVH4 76 aa10.52□□□□□ -0.72
GPC1-208ENST00000469694 SCGB3A1Q96QR1 104 aa10.52□□□□□ -0.72
GPC1-208ENST00000469694 SMAD5-AS1Q9Y6J3 95 aa10.52□□□□□ -0.72
GPC1-208ENST00000469694 DEFB113Q30KQ7 82 aa10.52□□□□□ -0.73
GPC1-208ENST00000469694 CCDC140Q96MF4 163 aa10.52□□□□□ -0.73
GPC1-208ENST00000469694 NDUFV3P56181 108 aaKnown RBP10.51□□□□□ -0.73
GPC1-208ENST00000469694 ERCC8Q13216 396 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 GCN1Q92616 2671 aaKnown RBP10.51□□□□□ -0.73
GPC1-208ENST00000469694 TRAV41A0A0B4J266 112 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 GAGE12JA6NER3 117 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 GAGE7O76087 117 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 IGHV4-59P01825 116 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 GAGE12FP0CL80 117 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 GAGE12GP0CL81 117 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 GAGE12IP0CL82 117 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 GAGE2BQ13066 116 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 GAGE4Q13068 117 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 DEFB112Q30KQ8 113 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 TMEM95Q3KNT9 176 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 GAGE2EQ4V326 116 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 TOMM6Q96B49 74 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 GAGE2DQ9UEU5 116 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 FLNAP21333 2647 aaKnown RBP10.51□□□□□ -0.73
GPC1-208ENST00000469694 IGHV3-49A0A0A0MS15 119 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 HERV-K104P63124 156 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 Q96MF0 132 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 SMIM2Q9BVW6 85 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 KLK15Q9H2R5 256 aa10.51□□□□□ -0.73
GPC1-208ENST00000469694 ANXA2RQ3ZCQ2 193 aa10.5□□□□□ -0.73
GPC1-208ENST00000469694 C11orf21Q9P2W6 132 aa10.5□□□□□ -0.73
GPC1-208ENST00000469694 ACANP16112 2415 aa10.5□□□□□ -0.73
GPC1-208ENST00000469694 A6NDX4 124 aa10.5□□□□□ -0.73
GPC1-208ENST00000469694 ASIPP42127 132 aa10.5□□□□□ -0.73
GPC1-208ENST00000469694 ORMDL2Q53FV1 153 aa10.5□□□□□ -0.73
GPC1-208ENST00000469694 RASL10AQ92737 203 aa10.5□□□□□ -0.73
GPC1-208ENST00000469694 CUBNO60494 3623 aa10.49□□□□□ -0.73
GPC1-208ENST00000469694 IGHV7-4-1A0A0J9YVY3 117 aa10.49□□□□□ -0.73
GPC1-208ENST00000469694 PRAC2D3DTV9 90 aa10.49□□□□□ -0.73
GPC1-208ENST00000469694 KLHL30-AS1Q8NEE0 82 aa10.49□□□□□ -0.73
GPC1-208ENST00000469694 HECTD1Q9ULT8 2610 aa10.49□□□□□ -0.73
GPC1-208ENST00000469694 CCDC179H3BU77 68 aa10.49□□□□□ -0.73
GPC1-208ENST00000469694 CFC1BP0CG36 223 aa10.49□□□□□ -0.73
GPC1-208ENST00000469694 CFC1P0CG37 223 aa10.49□□□□□ -0.73
GPC1-208ENST00000469694 BAALCQ8WXS3 180 aa10.49□□□□□ -0.73
GPC1-208ENST00000469694 TRAV4A0A0B4J268 109 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 SCGB1C2P0DMR2 95 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 IGHV4-31P0DP07 118 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 C10orf126Q8N4M7 172 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 RNF182Q8N6D2 247 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 CR1P17927 2039 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 A0A0J9YY99 117 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 M0QXV9 152 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 SNCGO76070 127 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 TRBV12-3P01733 135 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 IGHV3-11P01762 117 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 PLA2G2AP14555 144 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 RPL32P62910 135 aaKnown RBP10.48□□□□□ -0.73
GPC1-208ENST00000469694 MYO9AB2RTY4 2548 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 UNC79Q9P2D8 2635 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 IGHV4-4A0A075B6R2 117 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 SLC25A20O43772 301 aa10.48□□□□□ -0.73
GPC1-208ENST00000469694 TRAV8-2A0A0B4J237 113 aa10.47□□□□□ -0.73
GPC1-208ENST00000469694 CRLF1O75462 422 aa10.47□□□□□ -0.73
GPC1-208ENST00000469694 C19orf54Q5BKX5 351 aa10.47□□□□□ -0.73
GPC1-208ENST00000469694 TTC32Q5I0X7 151 aa10.47□□□□□ -0.73
GPC1-208ENST00000469694 KRTAP1-3Q8IUG1 177 aa10.47□□□□□ -0.73
GPC1-208ENST00000469694 SMIM20Q8N5G0 67 aa10.47□□□□□ -0.73
GPC1-208ENST00000469694 IFITM1P13164 125 aa10.47□□□□□ -0.73
GPC1-208ENST00000469694 DUX5Q96PT3 197 aa10.47□□□□□ -0.73
GPC1-208ENST00000469694 PDZD2O15018 2839 aa10.47□□□□□ -0.73
GPC1-208ENST00000469694 SPANXN1Q5VSR9 72 aa10.46□□□□□ -0.73
GPC1-208ENST00000469694 WFDC11Q8NEX6 87 aa10.46□□□□□ -0.73
GPC1-208ENST00000469694 RBAKDNA6NC62 111 aa10.46□□□□□ -0.74
GPC1-208ENST00000469694 IGHV3-30P01768 117 aa10.46□□□□□ -0.74
GPC1-208ENST00000469694 IGHV3-30-5P0DP03 117 aa10.46□□□□□ -0.74
GPC1-208ENST00000469694 Q6Q795 121 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms