RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 EREGO14944 169 aa12.34□□□□□ -0.43
PHGDH-204ENST00000469443 CXCL1P09341 107 aa12.34□□□□□ -0.43
PHGDH-204ENST00000469443 LINC00694P0DN24 101 aa12.34□□□□□ -0.43
PHGDH-204ENST00000469443 C14orf178Q8N769 122 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-204ENST00000469443 C11orf52Q96A22 123 aa12.34□□□□□ -0.43
PHGDH-204ENST00000469443 HSPG2P98160 4391 aa12.34□□□□□ -0.43
PHGDH-204ENST00000469443 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
PHGDH-204ENST00000469443 CDK2AP2O75956 126 aa12.33□□□□□ -0.44
PHGDH-204ENST00000469443 RPL19P84098 196 aaKnown RBP12.33□□□□□ -0.44
PHGDH-204ENST00000469443 GAGE1Q13065 139 aa12.33□□□□□ -0.44
PHGDH-204ENST00000469443 GAGE4Q13068 117 aa12.33□□□□□ -0.44
PHGDH-204ENST00000469443 GAGE5Q13069 117 aa12.33□□□□□ -0.44
PHGDH-204ENST00000469443 GAGE13Q4V321 117 aa12.33□□□□□ -0.44
PHGDH-204ENST00000469443 FAM74A4Q5TZK3 123 aa12.33□□□□□ -0.44
PHGDH-204ENST00000469443 SLC51BQ86UW2 128 aa12.33□□□□□ -0.44
PHGDH-204ENST00000469443 A0A087WWL8 130 aa12.32□□□□□ -0.44
PHGDH-204ENST00000469443 RPL35P42766 123 aaKnown RBP12.32□□□□□ -0.44
PHGDH-204ENST00000469443 Q9UF83 564 aa12.32□□□□□ -0.44
PHGDH-204ENST00000469443 APOBP04114 4563 aaKnown RBP12.31□□□□□ -0.44
PHGDH-204ENST00000469443 PRR27Q6MZM9 219 aa12.31□□□□□ -0.44
PHGDH-204ENST00000469443 DERL1Q9BUN8 251 aa12.31□□□□□ -0.44
PHGDH-204ENST00000469443 PGPEP1Q9NXJ5 209 aa12.31□□□□□ -0.44
PHGDH-204ENST00000469443 A0A087WTM6 91 aa12.3□□□□□ -0.44
PHGDH-204ENST00000469443 IBA57-AS1B1ANH7 110 aa12.3□□□□□ -0.44
PHGDH-204ENST00000469443 IGHV3-30P01768 117 aa12.3□□□□□ -0.44
PHGDH-204ENST00000469443 IGHV3-33P01772 117 aa12.3□□□□□ -0.44
PHGDH-204ENST00000469443 IGHV3-30-3P0DP02 117 aa12.3□□□□□ -0.44
PHGDH-204ENST00000469443 IGHV3-30-5P0DP03 117 aa12.3□□□□□ -0.44
PHGDH-204ENST00000469443 AKAP14Q86UN6 197 aa12.29□□□□□ -0.44
PHGDH-204ENST00000469443 OR10AG1Q8NH19 301 aa12.29□□□□□ -0.44
PHGDH-204ENST00000469443 A0A087WWC5 75 aa12.28□□□□□ -0.44
PHGDH-204ENST00000469443 SNAI2O43623 268 aa12.28□□□□□ -0.44
PHGDH-204ENST00000469443 IFNA1P01562 189 aa12.28□□□□□ -0.44
PHGDH-204ENST00000469443 OR5AL1P0C617 328 aa12.28□□□□□ -0.44
PHGDH-204ENST00000469443 MEF2BQ02080 365 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-204ENST00000469443 CENPWQ5EE01 88 aa12.28□□□□□ -0.44
PHGDH-204ENST00000469443 SSBP4Q9BWG4 385 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-204ENST00000469443 TRBV10-1A0A0K0K1A3 114 aa12.27□□□□□ -0.45
PHGDH-204ENST00000469443 PDE6DO43924 150 aa12.27□□□□□ -0.45
PHGDH-204ENST00000469443 CDPF1Q6NVV7 123 aa12.27□□□□□ -0.45
PHGDH-204ENST00000469443 hCG_2014768A0A024R1R8 64 aa12.26□□□□□ -0.45
PHGDH-204ENST00000469443 PSCAO43653 123 aa12.26□□□□□ -0.45
PHGDH-204ENST00000469443 IGLV2-8P01709 118 aa12.26□□□□□ -0.45
PHGDH-204ENST00000469443 LAGE3Q14657 143 aa12.26□□□□□ -0.45
PHGDH-204ENST00000469443 SPANXN1Q5VSR9 72 aa12.26□□□□□ -0.45
PHGDH-204ENST00000469443 C9orf62Q8N4C0 152 aa12.26□□□□□ -0.45
PHGDH-204ENST00000469443 Q9HAA7 133 aa12.26□□□□□ -0.45
PHGDH-204ENST00000469443 RAB19A4D1S5 217 aa12.25□□□□□ -0.45
PHGDH-204ENST00000469443 BCL2P10415 239 aa12.25□□□□□ -0.45
PHGDH-204ENST00000469443 FUSP35637 526 aaKnown RBP eCLIP12.25□□□□□ -0.45
PHGDH-204ENST00000469443 RPL36AP83881 106 aaKnown RBP12.25□□□□□ -0.45
PHGDH-204ENST00000469443 RPL36ALQ969Q0 106 aaKnown RBP12.25□□□□□ -0.45
PHGDH-204ENST00000469443 SMIM12Q96EX1 92 aa12.25□□□□□ -0.45
PHGDH-204ENST00000469443 MUC21A0A0G2JKD1 596 aa12.24□□□□□ -0.45
PHGDH-204ENST00000469443 MUC21A0A140T8X8 626 aa12.24□□□□□ -0.45
PHGDH-204ENST00000469443 GNG4P50150 75 aa12.24□□□□□ -0.45
PHGDH-204ENST00000469443 RAB4BP61018 213 aa12.24□□□□□ -0.45
PHGDH-204ENST00000469443 ZNF56Q15929 161 aa12.24□□□□□ -0.45
PHGDH-204ENST00000469443 Q8N3U1 123 aa12.24□□□□□ -0.45
PHGDH-204ENST00000469443 DAZAP1Q96EP5 407 aaKnown RBP12.24□□□□□ -0.45
PHGDH-204ENST00000469443 MED9Q9NWA0 146 aa12.24□□□□□ -0.45
PHGDH-204ENST00000469443 VAX2Q9UIW0 290 aa12.24□□□□□ -0.45
PHGDH-204ENST00000469443 PCLOQ9Y6V0 5065 aa12.24□□□□□ -0.45
PHGDH-204ENST00000469443 TRBV7-3A0A075B6L6 115 aa12.23□□□□□ -0.45
PHGDH-204ENST00000469443 TAGLN2P37802 199 aaKnown RBP12.23□□□□□ -0.45
PHGDH-204ENST00000469443 UBE2D3P61077 147 aa12.23□□□□□ -0.45
PHGDH-204ENST00000469443 UBE2D2P62837 147 aa12.23□□□□□ -0.45
PHGDH-204ENST00000469443 C19orf71A6NCJ1 209 aa12.22□□□□□ -0.45
PHGDH-204ENST00000469443 LRCOL1A6NCL2 159 aa12.22□□□□□ -0.45
PHGDH-204ENST00000469443 RPS20P60866 119 aaKnown RBP12.22□□□□□ -0.45
PHGDH-204ENST00000469443 MAPKAPK5-AS1Q8N8E1 139 aa12.22□□□□□ -0.45
PHGDH-204ENST00000469443 OR2D3Q8NGH3 330 aa12.22□□□□□ -0.45
PHGDH-204ENST00000469443 OR10G8Q8NGN5 311 aa12.22□□□□□ -0.45
PHGDH-204ENST00000469443 TRBV20OR9-2A0A075B6H5 130 aa12.21□□□□□ -0.45
PHGDH-204ENST00000469443 GZMBP10144 247 aa12.21□□□□□ -0.45
PHGDH-204ENST00000469443 SSTP61278 116 aa12.21□□□□□ -0.45
PHGDH-204ENST00000469443 DAZ4Q86SG3 579 aaKnown RBP12.21□□□□□ -0.45
PHGDH-204ENST00000469443 KRTAP4-5Q9BYR2 181 aa12.21□□□□□ -0.45
PHGDH-204ENST00000469443 BIN3Q9NQY0 253 aa12.21□□□□□ -0.45
PHGDH-204ENST00000469443 DAZ3Q9NR90 486 aaKnown RBP12.21□□□□□ -0.45
PHGDH-204ENST00000469443 IGLC6P0CF74 106 aa12.2□□□□□ -0.46
PHGDH-204ENST00000469443 TOR2AQ5JU69 321 aa12.2□□□□□ -0.46
PHGDH-204ENST00000469443 NIT1Q86X76 327 aa12.2□□□□□ -0.46
PHGDH-204ENST00000469443 FER1L6-AS1Q8NA97 138 aa12.2□□□□□ -0.46
PHGDH-204ENST00000469443 NEXN-AS1Q8NBZ9 246 aa12.2□□□□□ -0.46
PHGDH-204ENST00000469443 AP1S3Q96PC3 154 aa12.2□□□□□ -0.46
PHGDH-204ENST00000469443 TM2D2Q9BX73 214 aa12.2□□□□□ -0.46
PHGDH-204ENST00000469443 URGCP-MRPS24S4R325 110 aa12.2□□□□□ -0.46
PHGDH-204ENST00000469443 TRAV8-3A0A0A6YYJ7 113 aa12.19□□□□□ -0.46
PHGDH-204ENST00000469443 RBFOX3A6NFN3 312 aa12.19□□□□□ -0.46
PHGDH-204ENST00000469443 F5H697 171 aa12.19□□□□□ -0.46
PHGDH-204ENST00000469443 P01737 135 aa12.19□□□□□ -0.46
PHGDH-204ENST00000469443 SMIM17P0DL12 118 aa12.19□□□□□ -0.46
PHGDH-204ENST00000469443 ALKAL2Q6UX46 152 aa12.19□□□□□ -0.46
PHGDH-204ENST00000469443 TPPP3Q9BW30 176 aa12.19□□□□□ -0.46
PHGDH-204ENST00000469443 KIF25-AS1Q9Y6Z4 181 aa12.19□□□□□ -0.46
PHGDH-204ENST00000469443 XKRY2A2RUG3 117 aa12.18□□□□□ -0.46
PHGDH-204ENST00000469443 BLOC1S1P78537 153 aa12.18□□□□□ -0.46
PHGDH-204ENST00000469443 CACNG7P62955 275 aa12.17□□□□□ -0.46
PHGDH-204ENST00000469443 Q8N1X5 172 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms