RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 TAS2R4Q9NYW5 299 aa1.87□□□□□ -2.11
XRN1-207ENST00000468894 OR5V1Q9UGF6 321 aa1.87□□□□□ -2.11
XRN1-207ENST00000468894 ABCA6Q8N139 1617 aa1.87□□□□□ -2.11
XRN1-207ENST00000468894 PTPN23Q9H3S7 1636 aa1.87□□□□□ -2.11
XRN1-207ENST00000468894 BAHCC1Q9P281 2608 aa1.87□□□□□ -2.11
XRN1-207ENST00000468894 RP1L1Q8IWN7 2480 aaPredicted RBP1.86□□□□□ -2.11
XRN1-207ENST00000468894 CDK13Q14004 1512 aaKnown RBP1.86□□□□□ -2.11
XRN1-207ENST00000468894 DISP1Q96F81 1524 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 GBF1Q92538 1859 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 TRANK1O15050 2925 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 SSSCA1O60232 199 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 CREBL2O60519 120 aaPredicted RBP1.86□□□□□ -2.11
XRN1-207ENST00000468894 LY6HO94772 140 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 IGLV1-51P01701 117 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 IGKCP01834 107 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 PEBP1P30086 187 aaKnown RBP1.86□□□□□ -2.11
XRN1-207ENST00000468894 FAUP35544 74 aaKnown RBP1.86□□□□□ -2.11
XRN1-207ENST00000468894 ASIPP42127 132 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 SSR2P43308 183 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 POLR2JP52435 117 aaKnown RBP1.86□□□□□ -2.11
XRN1-207ENST00000468894 WFDC2Q14508 124 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 FAM229BQ4G0N7 80 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 BVES-AS1Q5T3Y7 98 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 C12orf73Q69YU5 71 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 MYO7BQ6PIF6 2116 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 DPPA3Q6W0C5 159 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 SDIM1Q6ZPB5 146 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 Q6ZQT7 251 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 SLC25A26Q70HW3 274 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 Q8IYB0 196 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 FAM213BQ8TBF2 198 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 CHCHD1Q96BP2 118 aaKnown RBP1.86□□□□□ -2.11
XRN1-207ENST00000468894 ST20Q9HBF5 79 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 TMEM242Q9NWH2 141 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 LINC00474Q9P2X8 69 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 SPCS1Q9Y6A9 102 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 U3KQK5 164 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 MAP3K4Q9Y6R4 1608 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 FANCD2Q9BXW9 1451 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 TSC2P49815 1807 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 CLTCQ00610 1675 aaKnown RBP1.86□□□□□ -2.11
XRN1-207ENST00000468894 KIAA0100Q14667 2235 aaKnown RBP1.86□□□□□ -2.11
XRN1-207ENST00000468894 ARHGEF12Q9NZN5 1544 aa1.86□□□□□ -2.11
XRN1-207ENST00000468894 XRN1Q8IZH2 1706 aaKnown RBP1.86□□□□□ -2.11
XRN1-207ENST00000468894 LAMB2P55268 1798 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 MED13Q9UHV7 2174 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 AFDNP55196 1824 aaKnown RBP1.85□□□□□ -2.11
XRN1-207ENST00000468894 IGKV2D-26A0A0A0MRZ7 120 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 IGHV3-15A0A0B4J1V0 119 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 TRBV7-7A0A0K0K1E9 115 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 A0A1W2PPM0 123 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 A0A1W2PQD3 144 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 TMEM235A6NFC5 223 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 H3BMM0 161 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 LYRM1O43325 122 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 SIX6O95475 246 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 GYPAP02724 150 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 IL5P05113 134 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 RPL28P46779 137 aaKnown RBP1.85□□□□□ -2.11
XRN1-207ENST00000468894 XCL1P47992 114 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 ATP5EP56381 51 aaPredicted RBP1.85□□□□□ -2.11
XRN1-207ENST00000468894 RBM3P98179 157 aaKnown RBP1.85□□□□□ -2.11
XRN1-207ENST00000468894 ADIRFQ15847 76 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 ETDBQ3ZM63 59 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 S100A7L2Q5SY68 101 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 ATP11AUNQ6ZP68 121 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 C2orf91Q6ZV80 131 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 C5orf38Q86SI9 138 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 Q8N814 137 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 OR10AG1Q8NH19 301 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 PPDPFLQ8WWR9 84 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 UBE2WQ96B02 151 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 C20orf166-AS1Q96NR2 134 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 IMMP2LQ96T52 175 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 RETNLBQ9BQ08 111 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 SLC50A1Q9BRV3 221 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 CXCL16Q9H2A7 254 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 GOLGA3Q08378 1498 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 SHANK2Q9UPX8 1470 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 USP24Q9UPU5 2620 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 SETBP1Q9Y6X0 1596 aa1.85□□□□□ -2.11
XRN1-207ENST00000468894 COL4A6Q14031 1691 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 FREM3P0C091 2139 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 PXDNQ92626 1479 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 NUP188Q5SRE5 1749 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 IGKV1D-37A0A075B6S9 117 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 IGHV3-73A0A0B4J1V6 119 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 TRAV3A0A0B4J244 114 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 MUC21A0A140T8X8 626 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 UBE2L5PA0A1B0GUS4 154 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 M0R233 179 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 PIRTP0C851 137 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 ZNF22P17026 224 aaPredicted RBP1.84□□□□□ -2.11
XRN1-207ENST00000468894 CKS2P33552 79 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 FXYD2P54710 66 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 SEC11AP67812 179 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 UBE2L3P68036 154 aaKnown RBP1.84□□□□□ -2.11
XRN1-207ENST00000468894 SPATA45Q537H7 98 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 NMSQ5H8A3 153 aa1.84□□□□□ -2.11
XRN1-207ENST00000468894 LYZL1Q6UWQ5 148 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms