RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 NUDT10Q8NFP7 164 aa10.18□□□□□ -0.78
TMEM39A-205ENST00000468676 OR10AG1Q8NH19 301 aa10.18□□□□□ -0.78
TMEM39A-205ENST00000468676 NUDT11Q96G61 164 aa10.18□□□□□ -0.78
TMEM39A-205ENST00000468676 SMIM7Q9BQ49 75 aa10.18□□□□□ -0.78
TMEM39A-205ENST00000468676 SMDT1Q9H4I9 107 aa10.18□□□□□ -0.78
TMEM39A-205ENST00000468676 A0A087WWL8 130 aa10.17□□□□□ -0.78
TMEM39A-205ENST00000468676 LOC100131303A0A0U1RQF7 123 aa10.17□□□□□ -0.78
TMEM39A-205ENST00000468676 K7EN84 100 aa10.17□□□□□ -0.78
TMEM39A-205ENST00000468676 SRP19P09132 144 aaKnown RBP10.17□□□□□ -0.78
TMEM39A-205ENST00000468676 IGLC6P0CF74 106 aa10.17□□□□□ -0.78
TMEM39A-205ENST00000468676 CACNG7P62955 275 aa10.17□□□□□ -0.78
TMEM39A-205ENST00000468676 PEA15Q15121 130 aa10.17□□□□□ -0.78
TMEM39A-205ENST00000468676 FAM74A3Q4VXF1 159 aa10.17□□□□□ -0.78
TMEM39A-205ENST00000468676 ZNF727A8MUV8 499 aa10.16□□□□□ -0.78
TMEM39A-205ENST00000468676 SIVA1O15304 175 aa10.16□□□□□ -0.78
TMEM39A-205ENST00000468676 GZMBP10144 247 aa10.16□□□□□ -0.78
TMEM39A-205ENST00000468676 C1orf134Q5TEV5 83 aa10.16□□□□□ -0.78
TMEM39A-205ENST00000468676 Q6ZSN1 163 aa10.16□□□□□ -0.78
TMEM39A-205ENST00000468676 FAM231DQ6ZW35 169 aa10.16□□□□□ -0.78
TMEM39A-205ENST00000468676 TPPP3Q9BW30 176 aa10.16□□□□□ -0.78
TMEM39A-205ENST00000468676 RPP21Q9H633 154 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-205ENST00000468676 TRBV10-1A0A0K0K1A3 114 aa10.15□□□□□ -0.78
TMEM39A-205ENST00000468676 SMIM17P0DL12 118 aa10.15□□□□□ -0.78
TMEM39A-205ENST00000468676 BTF3P20290 206 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-205ENST00000468676 RAB4BP61018 213 aa10.15□□□□□ -0.78
TMEM39A-205ENST00000468676 RAB14P61106 215 aa10.15□□□□□ -0.78
TMEM39A-205ENST00000468676 WDR73Q6P4I2 378 aa10.15□□□□□ -0.78
TMEM39A-205ENST00000468676 ATP6V0E2Q8NHE4 81 aa10.15□□□□□ -0.78
TMEM39A-205ENST00000468676 AP1S3Q96PC3 154 aa10.15□□□□□ -0.78
TMEM39A-205ENST00000468676 RNASE7Q9H1E1 156 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-205ENST00000468676 MUC21A0A0G2JKD1 596 aa10.14□□□□□ -0.79
TMEM39A-205ENST00000468676 MUC21A0A140T8X8 626 aa10.14□□□□□ -0.79
TMEM39A-205ENST00000468676 K7EP13 123 aa10.14□□□□□ -0.79
TMEM39A-205ENST00000468676 C14orf178Q8N769 122 aaPredicted RBP10.14□□□□□ -0.79
TMEM39A-205ENST00000468676 TRAV9-2A0A087WT02 112 aa10.13□□□□□ -0.79
TMEM39A-205ENST00000468676 GATCO43716 136 aaKnown RBP10.13□□□□□ -0.79
TMEM39A-205ENST00000468676 ERVFC1-1P60608 527 aa10.13□□□□□ -0.79
TMEM39A-205ENST00000468676 LYZL1Q6UWQ5 148 aa10.13□□□□□ -0.79
TMEM39A-205ENST00000468676 LINC01551Q86U37 167 aa10.13□□□□□ -0.79
TMEM39A-205ENST00000468676 C6orf223Q8N319 242 aa10.13□□□□□ -0.79
TMEM39A-205ENST00000468676 GTSF1LQ9H1H1 148 aa10.13□□□□□ -0.79
TMEM39A-205ENST00000468676 TRAV8-6A0A0B4J262 113 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 GAGE12JA6NER3 117 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 A8MWL6 223 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 LCE2BO14633 110 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 RTL8CO15255 209 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 TRGC1P0CF51 173 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 LINC00694P0DN24 101 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 CTRLP40313 264 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 SSTP61278 116 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 GAGE1Q13065 139 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 GAGE4Q13068 117 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 GAGE5Q13069 117 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 ZNF56Q15929 161 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 TMEM241Q24JQ0 296 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 GAGE13Q4V321 117 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 CT83Q5H943 113 aa10.12□□□□□ -0.79
TMEM39A-205ENST00000468676 A0A087WWC5 75 aa10.11□□□□□ -0.79
TMEM39A-205ENST00000468676 F5H697 171 aa10.11□□□□□ -0.79
TMEM39A-205ENST00000468676 RPL36AP83881 106 aaKnown RBP10.11□□□□□ -0.79
TMEM39A-205ENST00000468676 LELP1Q5T871 98 aa10.11□□□□□ -0.79
TMEM39A-205ENST00000468676 RPL36ALQ969Q0 106 aaKnown RBP10.11□□□□□ -0.79
TMEM39A-205ENST00000468676 CNFNQ9BYD5 112 aa10.11□□□□□ -0.79
TMEM39A-205ENST00000468676 KIF25-AS1Q9Y6Z4 181 aa10.11□□□□□ -0.79
TMEM39A-205ENST00000468676 FRAS1Q86XX4 4008 aa10.1□□□□□ -0.79
TMEM39A-205ENST00000468676 DNAH10OSP0CZ25 163 aa10.1□□□□□ -0.79
TMEM39A-205ENST00000468676 NTF3P20783 257 aa10.1□□□□□ -0.79
TMEM39A-205ENST00000468676 EVI2AP22794 236 aa10.1□□□□□ -0.79
TMEM39A-205ENST00000468676 C15orf54Q8N8G6 183 aa10.1□□□□□ -0.79
TMEM39A-205ENST00000468676 OSTCQ9NRP0 149 aa10.1□□□□□ -0.79
TMEM39A-205ENST00000468676 NAT8Q9UHE5 227 aa10.1□□□□□ -0.79
TMEM39A-205ENST00000468676 DNAH10Q8IVF4 4471 aa10.09□□□□□ -0.79
TMEM39A-205ENST00000468676 TRBV7-3A0A075B6L6 115 aa10.09□□□□□ -0.79
TMEM39A-205ENST00000468676 IGHV3-38A0A0C4DH36 116 aa10.09□□□□□ -0.79
TMEM39A-205ENST00000468676 PRSS29PA6NIE9 313 aa10.09□□□□□ -0.79
TMEM39A-205ENST00000468676 C9JQL5 133 aa10.09□□□□□ -0.79
TMEM39A-205ENST00000468676 OR10J3Q5JRS4 329 aa10.09□□□□□ -0.79
TMEM39A-205ENST00000468676 WFDC10BQ8IUB3 73 aa10.09□□□□□ -0.79
TMEM39A-205ENST00000468676 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.09□□□□□ -0.79
TMEM39A-205ENST00000468676 OR10G8Q8NGN5 311 aa10.09□□□□□ -0.79
TMEM39A-205ENST00000468676 KRTAP1-5Q9BYS1 174 aa10.09□□□□□ -0.79
TMEM39A-205ENST00000468676 MSRB1Q9NZV6 116 aa10.09□□□□□ -0.79
TMEM39A-205ENST00000468676 Q9UF83 564 aa10.09□□□□□ -0.79
TMEM39A-205ENST00000468676 FAM231BA6NCW3 169 aa10.08□□□□□ -0.8
TMEM39A-205ENST00000468676 H7C1H1 209 aa10.08□□□□□ -0.8
TMEM39A-205ENST00000468676 FOXA3P55318 350 aaPredicted RBP10.08□□□□□ -0.8
TMEM39A-205ENST00000468676 LINC00315P59091 139 aa10.08□□□□□ -0.8
TMEM39A-205ENST00000468676 SRSF3P84103 164 aaKnown RBP10.08□□□□□ -0.8
TMEM39A-205ENST00000468676 TWIST1Q15672 202 aa10.08□□□□□ -0.8
TMEM39A-205ENST00000468676 C10orf126Q8N4M7 172 aa10.08□□□□□ -0.8
TMEM39A-205ENST00000468676 GFRA4Q9GZZ7 299 aa10.08□□□□□ -0.8
TMEM39A-205ENST00000468676 DPH3P1Q9H4G8 78 aa10.08□□□□□ -0.8
TMEM39A-205ENST00000468676 UBE2D3P61077 147 aa10.07□□□□□ -0.8
TMEM39A-205ENST00000468676 UBE2D2P62837 147 aa10.07□□□□□ -0.8
TMEM39A-205ENST00000468676 LINC01556Q5JQF7 62 aa10.07□□□□□ -0.8
TMEM39A-205ENST00000468676 SMIM15Q7Z3B0 74 aa10.07□□□□□ -0.8
TMEM39A-205ENST00000468676 TSKUQ8WUA8 353 aa10.07□□□□□ -0.8
TMEM39A-205ENST00000468676 GTSF1Q8WW33 167 aa10.07□□□□□ -0.8
TMEM39A-205ENST00000468676 ISOC2Q96AB3 205 aa10.07□□□□□ -0.8
TMEM39A-205ENST00000468676 BORCS7Q96B45 105 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms