RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 IGHG2P01859 326 aa11.69□□□□□ -0.54
SNED1-208ENST00000466618 PSMB2P49721 201 aa11.69□□□□□ -0.54
SNED1-208ENST00000466618 NDPQ00604 133 aa11.69□□□□□ -0.54
SNED1-208ENST00000466618 ZFP2Q6ZN57 461 aa11.69□□□□□ -0.54
SNED1-208ENST00000466618 TEN1Q86WV5 123 aa11.69□□□□□ -0.54
SNED1-208ENST00000466618 Q8N2B8 174 aa11.69□□□□□ -0.54
SNED1-208ENST00000466618 LINC01549A6NIU2 74 aa11.68□□□□□ -0.54
SNED1-208ENST00000466618 LGALS1P09382 135 aaKnown RBP11.68□□□□□ -0.54
SNED1-208ENST00000466618 PLNP26678 52 aa11.68□□□□□ -0.54
SNED1-208ENST00000466618 UBE2D3P61077 147 aa11.68□□□□□ -0.54
SNED1-208ENST00000466618 UBE2D2P62837 147 aa11.68□□□□□ -0.54
SNED1-208ENST00000466618 MYOZ3Q8TDC0 251 aa11.68□□□□□ -0.54
SNED1-208ENST00000466618 ZNF702PQ9H963 129 aa11.68□□□□□ -0.54
SNED1-208ENST00000466618 K7EIM0 57 aa11.68□□□□□ -0.54
SNED1-208ENST00000466618 NHLRC4P0CG21 123 aaPredicted RBP11.68□□□□□ -0.54
SNED1-208ENST00000466618 UBE2D1P51668 147 aa11.68□□□□□ -0.54
SNED1-208ENST00000466618 SRSF2Q01130 221 aaKnown RBP11.67□□□□□ -0.54
SNED1-208ENST00000466618 LAGE3Q14657 143 aa11.67□□□□□ -0.54
SNED1-208ENST00000466618 SFTA2Q6UW10 78 aa11.67□□□□□ -0.54
SNED1-208ENST00000466618 CITED1Q99966 193 aa11.67□□□□□ -0.54
SNED1-208ENST00000466618 UFC1Q9Y3C8 167 aa11.67□□□□□ -0.54
SNED1-208ENST00000466618 SETD2Q9BYW2 2564 aaPredicted RBP11.66□□□□□ -0.54
SNED1-208ENST00000466618 B5MCH6 92 aa11.66□□□□□ -0.54
SNED1-208ENST00000466618 IGF1P05019 195 aa11.66□□□□□ -0.54
SNED1-208ENST00000466618 CRIP2P52943 208 aaPredicted RBP11.66□□□□□ -0.54
SNED1-208ENST00000466618 ZFAND6Q6FIF0 208 aa11.66□□□□□ -0.54
SNED1-208ENST00000466618 Q6ZSV7 163 aa11.66□□□□□ -0.54
SNED1-208ENST00000466618 SBSPONQ8IVN8 264 aa11.66□□□□□ -0.54
SNED1-208ENST00000466618 NRACQ8N912 160 aa11.66□□□□□ -0.54
SNED1-208ENST00000466618 LOC107984156A0A0G2JMH3 177 aa11.65□□□□□ -0.54
SNED1-208ENST00000466618 F8VRH5 84 aa11.65□□□□□ -0.54
SNED1-208ENST00000466618 ORM1P02763 201 aa11.65□□□□□ -0.54
SNED1-208ENST00000466618 ZNF688P0C7X2 276 aa11.65□□□□□ -0.54
SNED1-208ENST00000466618 ARL17AQ8IVW1 177 aa11.65□□□□□ -0.54
SNED1-208ENST00000466618 KIR2DL4Q99706 377 aa11.65□□□□□ -0.54
SNED1-208ENST00000466618 TRAV12-1A0A0B4J245 112 aa11.65□□□□□ -0.54
SNED1-208ENST00000466618 ATP6V0E1O15342 81 aa11.65□□□□□ -0.54
SNED1-208ENST00000466618 CNIH1O95406 144 aa11.65□□□□□ -0.54
SNED1-208ENST00000466618 PRIMA1Q86XR5 153 aa11.65□□□□□ -0.54
SNED1-208ENST00000466618 VCX2Q9H322 139 aa11.65□□□□□ -0.54
SNED1-208ENST00000466618 ZNF580Q9UK33 172 aa11.65□□□□□ -0.54
SNED1-208ENST00000466618 H7C1H1 209 aa11.64□□□□□ -0.55
SNED1-208ENST00000466618 TRGV3P03979 118 aa11.64□□□□□ -0.55
SNED1-208ENST00000466618 C19orf54Q5BKX5 351 aa11.64□□□□□ -0.55
SNED1-208ENST00000466618 TMEM78Q5T7P6 136 aa11.64□□□□□ -0.55
SNED1-208ENST00000466618 SHISA2Q6UWI4 295 aa11.64□□□□□ -0.55
SNED1-208ENST00000466618 C16orf95Q9H693 158 aa11.64□□□□□ -0.55
SNED1-208ENST00000466618 JMJD1CQ15652 2540 aa11.64□□□□□ -0.55
SNED1-208ENST00000466618 NDUFA7O95182 113 aa11.64□□□□□ -0.55
SNED1-208ENST00000466618 TCL1BO95988 128 aa11.64□□□□□ -0.55
SNED1-208ENST00000466618 IGHG4P01861 327 aa11.64□□□□□ -0.55
SNED1-208ENST00000466618 SRSF8Q9BRL6 282 aaKnown RBP11.64□□□□□ -0.55
SNED1-208ENST00000466618 PLEKHB2Q96CS7 222 aa11.63□□□□□ -0.55
SNED1-208ENST00000466618 TRAV26-2A0A0B4J265 109 aa11.62□□□□□ -0.55
SNED1-208ENST00000466618 CD7P09564 240 aa11.62□□□□□ -0.55
SNED1-208ENST00000466618 TMEM95Q3KNT9 176 aa11.62□□□□□ -0.55
SNED1-208ENST00000466618 ANKRD29Q8N6D5 301 aa11.62□□□□□ -0.55
SNED1-208ENST00000466618 HLA-DMBP28068 263 aa11.62□□□□□ -0.55
SNED1-208ENST00000466618 IGFL4Q6B9Z1 124 aa11.62□□□□□ -0.55
SNED1-208ENST00000466618 TRBV7-9A0A0J9YWB2 115 aa11.61□□□□□ -0.55
SNED1-208ENST00000466618 CFHR3Q02985 330 aa11.61□□□□□ -0.55
SNED1-208ENST00000466618 LINC00527Q9UJ94 153 aa11.61□□□□□ -0.55
SNED1-208ENST00000466618 S4R3C0 116 aa11.61□□□□□ -0.55
SNED1-208ENST00000466618 FABP5P3A8MUU1 101 aa11.61□□□□□ -0.55
SNED1-208ENST00000466618 A8MWV9 139 aa11.61□□□□□ -0.55
SNED1-208ENST00000466618 G3V318 75 aa11.61□□□□□ -0.55
SNED1-208ENST00000466618 LINC01006Q8NI28 216 aa11.61□□□□□ -0.55
SNED1-208ENST00000466618 FAM110AQ9BQ89 295 aa11.61□□□□□ -0.55
SNED1-208ENST00000466618 PRADC1Q9BSG0 188 aa11.61□□□□□ -0.55
SNED1-208ENST00000466618 TRAV41A0A0B4J266 112 aa11.6□□□□□ -0.55
SNED1-208ENST00000466618 RHODO00212 210 aa11.6□□□□□ -0.55
SNED1-208ENST00000466618 C2CD3Q4AC94 2353 aa11.6□□□□□ -0.55
SNED1-208ENST00000466618 ZNF815PA8K554 130 aa11.6□□□□□ -0.55
SNED1-208ENST00000466618 NEXN-AS1Q8NBZ9 246 aa11.6□□□□□ -0.55
SNED1-208ENST00000466618 FBN1P35555 2871 aaKnown RBP11.59□□□□□ -0.55
SNED1-208ENST00000466618 IGKV3D-20A0A0C4DH25 116 aa11.59□□□□□ -0.55
SNED1-208ENST00000466618 TMEM262E9PQX1 116 aa11.59□□□□□ -0.55
SNED1-208ENST00000466618 ECSCRQ19T08 205 aa11.59□□□□□ -0.55
SNED1-208ENST00000466618 LYRM7Q5U5X0 104 aa11.59□□□□□ -0.55
SNED1-208ENST00000466618 NDUFA11Q86Y39 141 aa11.59□□□□□ -0.55
SNED1-208ENST00000466618 SMAD5-AS1Q9Y6J3 95 aa11.59□□□□□ -0.55
SNED1-208ENST00000466618 KLK9Q2XQG4 91 aa11.58□□□□□ -0.56
SNED1-208ENST00000466618 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.58□□□□□ -0.56
SNED1-208ENST00000466618 KLK9Q9UKQ9 250 aa11.58□□□□□ -0.56
SNED1-208ENST00000466618 TRBV20-1A0A075B6N2 111 aa11.58□□□□□ -0.56
SNED1-208ENST00000466618 CCDC179H3BU77 68 aa11.58□□□□□ -0.56
SNED1-208ENST00000466618 HERV-K104P63124 156 aa11.58□□□□□ -0.56
SNED1-208ENST00000466618 ERCC8Q13216 396 aa11.58□□□□□ -0.56
SNED1-208ENST00000466618 FAM110DQ8TAY7 271 aaPredicted RBP11.58□□□□□ -0.56
SNED1-208ENST00000466618 C11orf21Q9P2W6 132 aa11.58□□□□□ -0.56
SNED1-208ENST00000466618 H3BVH4 76 aa11.57□□□□□ -0.56
SNED1-208ENST00000466618 IGLV1-40P01703 118 aa11.57□□□□□ -0.56
SNED1-208ENST00000466618 NDUFV3P56181 108 aaKnown RBP11.57□□□□□ -0.56
SNED1-208ENST00000466618 SRSF9Q13242 221 aaKnown RBP eCLIP11.57□□□□□ -0.56
SNED1-208ENST00000466618 F8W735 103 aaPredicted RBP11.57□□□□□ -0.56
SNED1-208ENST00000466618 BRI3O95415 125 aa11.57□□□□□ -0.56
SNED1-208ENST00000466618 RPL7P18124 248 aaKnown RBP11.57□□□□□ -0.56
SNED1-208ENST00000466618 ANXA2RQ3ZCQ2 193 aa11.57□□□□□ -0.56
SNED1-208ENST00000466618 SCGB1D4Q6XE38 83 aa11.57□□□□□ -0.56
SNED1-208ENST00000466618 RASL10AQ92737 203 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms