RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 RAB4AP20338 218 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 Q6ZTI0 123 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 ORMDL3Q8N138 153 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 OR4C5Q8NGB2 326 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 RASL10AQ92737 203 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 MRAP2Q96G30 205 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 RNF185Q96GF1 192 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 SPATA25Q9BR10 227 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 LYRM9A8MSI8 78 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 PHOX2AO14813 284 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 HIST1H2BKO60814 126 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 NCR2O95944 276 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 PPBPP02775 128 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 S100A6P06703 90 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 HIST1H2BJP06899 126 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 HIST1H2BOP23527 126 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 HIST1H2BBP33778 126 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 HIST1H2BDP58876 126 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 HIST1H2BCP62807 126 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 HIST2H2BEQ16778 126 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.7□□□□□ -1.02
VPS16-206ENST00000466415 Q8NAQ8 132 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 HIST1H2BHQ93079 126 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 PRELID3AQ96N28 172 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 HIST1H2BNQ99877 126 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 HIST1H2BMQ99879 126 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 SAMD10Q9BYL1 202 aa8.7□□□□□ -1.02
VPS16-206ENST00000466415 DNAH3Q8TD57 4116 aa8.69□□□□□ -1.02
VPS16-206ENST00000466415 IGHV3-73A0A0B4J1V6 119 aa8.69□□□□□ -1.02
VPS16-206ENST00000466415 TRAV4A0A0B4J268 109 aa8.69□□□□□ -1.02
VPS16-206ENST00000466415 TEX48A0A1B0GUV7 120 aa8.69□□□□□ -1.02
VPS16-206ENST00000466415 SMKR1H3BMG3 65 aa8.69□□□□□ -1.02
VPS16-206ENST00000466415 DEFB4AO15263 64 aa8.69□□□□□ -1.02
VPS16-206ENST00000466415 RS1O15537 224 aa8.69□□□□□ -1.02
VPS16-206ENST00000466415 FAM222AQ5U5X8 452 aa8.69□□□□□ -1.02
VPS16-206ENST00000466415 CFAP126Q5VTH2 177 aa8.69□□□□□ -1.02
VPS16-206ENST00000466415 SBSPONQ8IVN8 264 aa8.69□□□□□ -1.02
VPS16-206ENST00000466415 ALKBH7Q9BT30 221 aaPredicted RBP8.69□□□□□ -1.02
VPS16-206ENST00000466415 ZMAT4Q9H898 229 aa8.69□□□□□ -1.02
VPS16-206ENST00000466415 KIF25-AS1Q9Y6Z4 181 aa8.69□□□□□ -1.02
VPS16-206ENST00000466415 TRAV26-2A0A0B4J265 109 aa8.68□□□□□ -1.02
VPS16-206ENST00000466415 IGHV3-53P01767 116 aa8.68□□□□□ -1.02
VPS16-206ENST00000466415 CRYGDP07320 174 aa8.68□□□□□ -1.02
VPS16-206ENST00000466415 DEFB130BP0DP73 79 aa8.68□□□□□ -1.02
VPS16-206ENST00000466415 DEFB130AP0DP74 79 aa8.68□□□□□ -1.02
VPS16-206ENST00000466415 SUMO4Q6EEV6 95 aa8.68□□□□□ -1.02
VPS16-206ENST00000466415 LAMTOR2Q9Y2Q5 125 aa8.68□□□□□ -1.02
VPS16-206ENST00000466415 H7C1H1 209 aa8.67□□□□□ -1.02
VPS16-206ENST00000466415 CIDEAO60543 219 aa8.67□□□□□ -1.02
VPS16-206ENST00000466415 PPP1R17O96001 155 aa8.67□□□□□ -1.02
VPS16-206ENST00000466415 SPART-AS1P0CW21 52 aa8.67□□□□□ -1.02
VPS16-206ENST00000466415 NDUFA6P56556 154 aa8.67□□□□□ -1.02
VPS16-206ENST00000466415 DAD1P61803 113 aa8.67□□□□□ -1.02
VPS16-206ENST00000466415 OR10J3Q5JRS4 329 aa8.67□□□□□ -1.02
VPS16-206ENST00000466415 ZFP2Q6ZN57 461 aa8.67□□□□□ -1.02
VPS16-206ENST00000466415 BAGE3Q86Y29 109 aa8.67□□□□□ -1.02
VPS16-206ENST00000466415 DKK2Q9UBU2 259 aa8.67□□□□□ -1.02
VPS16-206ENST00000466415 U3KQK5 164 aa8.67□□□□□ -1.02
VPS16-206ENST00000466415 MUC4Q99102 2169 aa8.66□□□□□ -1.02
VPS16-206ENST00000466415 IQCJQ1A5X6 159 aa8.66□□□□□ -1.02
VPS16-206ENST00000466415 POM121L12Q8N7R1 296 aa8.66□□□□□ -1.02
VPS16-206ENST00000466415 C18orf32Q8TCD1 76 aa8.66□□□□□ -1.02
VPS16-206ENST00000466415 ZNF479Q96JC4 524 aa8.66□□□□□ -1.02
VPS16-206ENST00000466415 TM2D3Q9BRN9 247 aa8.66□□□□□ -1.02
VPS16-206ENST00000466415 C11orf68Q9H3H3 251 aaKnown RBP8.66□□□□□ -1.02
VPS16-206ENST00000466415 MAP1LC3AQ9H492 121 aa8.66□□□□□ -1.02
VPS16-206ENST00000466415 TRGV4A0A0C4DH28 118 aa8.65□□□□□ -1.02
VPS16-206ENST00000466415 TNFRSF6BO95407 300 aa8.65□□□□□ -1.02
VPS16-206ENST00000466415 NPYP01303 97 aa8.65□□□□□ -1.02
VPS16-206ENST00000466415 LINC00315P59091 139 aa8.65□□□□□ -1.02
VPS16-206ENST00000466415 Q0VG73 95 aa8.65□□□□□ -1.02
VPS16-206ENST00000466415 UFSP1Q6NVU6 142 aa8.65□□□□□ -1.02
VPS16-206ENST00000466415 LINC00612Q8N6U2 182 aa8.65□□□□□ -1.02
VPS16-206ENST00000466415 LOC389332A0A1B0GUA5 103 aa8.64□□□□□ -1.03
VPS16-206ENST00000466415 GATA1P15976 413 aaPredicted RBP8.64□□□□□ -1.03
VPS16-206ENST00000466415 PRSS3P2Q8NHM4 247 aa8.64□□□□□ -1.03
VPS16-206ENST00000466415 RPL39LQ96EH5 51 aaKnown RBP8.64□□□□□ -1.03
VPS16-206ENST00000466415 C18orf15Q96N68 181 aa8.64□□□□□ -1.03
VPS16-206ENST00000466415 B9D2Q9BPU9 175 aa8.64□□□□□ -1.03
VPS16-206ENST00000466415 CELA1Q9UNI1 258 aa8.64□□□□□ -1.03
VPS16-206ENST00000466415 A0A0J9YWU9 116 aa8.63□□□□□ -1.03
VPS16-206ENST00000466415 K7EQD1 137 aa8.63□□□□□ -1.03
VPS16-206ENST00000466415 GAS8-AS1O95177 125 aa8.63□□□□□ -1.03
VPS16-206ENST00000466415 DEFA6Q01524 100 aa8.63□□□□□ -1.03
VPS16-206ENST00000466415 RNASEKQ6P5S7 137 aaKnown RBP8.63□□□□□ -1.03
VPS16-206ENST00000466415 FA2HQ7L5A8 372 aa8.63□□□□□ -1.03
VPS16-206ENST00000466415 NRACQ8N912 160 aa8.63□□□□□ -1.03
VPS16-206ENST00000466415 EDA2RQ9HAV5 297 aa8.63□□□□□ -1.03
VPS16-206ENST00000466415 ST20Q9HBF5 79 aa8.63□□□□□ -1.03
VPS16-206ENST00000466415 PKD1L1Q8TDX9 2849 aa8.63□□□□□ -1.03
VPS16-206ENST00000466415 M0QY20 66 aa8.62□□□□□ -1.03
VPS16-206ENST00000466415 ATP5G1P05496 136 aa8.62□□□□□ -1.03
VPS16-206ENST00000466415 PMCHP20382 165 aa8.62□□□□□ -1.03
VPS16-206ENST00000466415 SUMO2P61956 95 aaKnown RBP8.62□□□□□ -1.03
VPS16-206ENST00000466415 C20orf78Q9BR46 151 aa8.62□□□□□ -1.03
VPS16-206ENST00000466415 NIT2Q9NQR4 276 aa8.62□□□□□ -1.03
VPS16-206ENST00000466415 TNFRSF18Q9Y5U5 241 aa8.62□□□□□ -1.03
VPS16-206ENST00000466415 DNHD1Q96M86 4753 aa8.62□□□□□ -1.03
VPS16-206ENST00000466415 SERF1AO75920 110 aa8.61□□□□□ -1.03
VPS16-206ENST00000466415 RHOHQ15669 191 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms