RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 TRBV7-1A0A0A6YYK4 115 aa0.18□□□□□ -2.38
CCDC93-205ENST00000466171 PIRTP0C851 137 aa0.18□□□□□ -2.38
CCDC93-205ENST00000466171 SSBP1Q04837 148 aaKnown RBP0.18□□□□□ -2.38
CCDC93-205ENST00000466171 ALX1Q15699 326 aa0.18□□□□□ -2.38
CCDC93-205ENST00000466171 SMIM21Q3B7S5 101 aa0.18□□□□□ -2.38
CCDC93-205ENST00000466171 SLC48A1Q6P1K1 146 aa0.18□□□□□ -2.38
CCDC93-205ENST00000466171 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.18□□□□□ -2.38
CCDC93-205ENST00000466171 Q6ZUT4 128 aa0.18□□□□□ -2.38
CCDC93-205ENST00000466171 COX7B2Q8TF08 81 aa0.18□□□□□ -2.38
CCDC93-205ENST00000466171 ANP32BQ92688 251 aaKnown RBP0.18□□□□□ -2.38
CCDC93-205ENST00000466171 BPESC1Q9GZL8 116 aa0.18□□□□□ -2.38
CCDC93-205ENST00000466171 TPT1P8Q9HAU6 139 aa0.18□□□□□ -2.38
CCDC93-205ENST00000466171 FHAD1B1AJZ9 1412 aa0.18□□□□□ -2.38
CCDC93-205ENST00000466171 MAP2P11137 1827 aaKnown RBP0.17□□□□□ -2.38
CCDC93-205ENST00000466171 A0A087WTM6 91 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 GVQW2A0A096LPI5 108 aaPredicted RBP0.17□□□□□ -2.38
CCDC93-205ENST00000466171 LOC105371267A0A1B0GV96 52 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 A6NIN4 97 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 NPFFO15130 113 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 SOGA1O94964 1423 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 CEP152O94986 1710 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 APODP05090 189 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 IL5P05113 134 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 TSPAN19P0C672 248 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 ACYP2P14621 99 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 S100A7L2Q5SY68 101 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 SMIM11BQ8TCY0 68 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 C10orf82Q8WW14 230 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 PRG4Q92954 1404 aaPredicted RBP0.17□□□□□ -2.38
CCDC93-205ENST00000466171 CDK5RAP2Q96SN8 1893 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 RPRMQ9NS64 109 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 V9GYV3 84 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 CDK13Q14004 1512 aaKnown RBP0.17□□□□□ -2.38
CCDC93-205ENST00000466171 TNCP24821 2201 aa0.17□□□□□ -2.38
CCDC93-205ENST00000466171 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
CCDC93-205ENST00000466171 VIRMAQ69YN4 1812 aaKnown RBP0.16□□□□□ -2.38
CCDC93-205ENST00000466171 SPAG17Q6Q759 2223 aa0.16□□□□□ -2.38
CCDC93-205ENST00000466171 SNCGO76070 127 aa0.16□□□□□ -2.38
CCDC93-205ENST00000466171 NCR2O95944 276 aa0.16□□□□□ -2.38
CCDC93-205ENST00000466171 PIPP12273 146 aaPredicted RBP0.16□□□□□ -2.38
CCDC93-205ENST00000466171 COPZ1P61923 177 aa0.16□□□□□ -2.38
CCDC93-205ENST00000466171 UBE2G1P62253 170 aa0.16□□□□□ -2.38
CCDC93-205ENST00000466171 SMCO1Q147U7 214 aa0.16□□□□□ -2.38
CCDC93-205ENST00000466171 SPTSSBQ8NFR3 76 aa0.16□□□□□ -2.38
CCDC93-205ENST00000466171 TMEM242Q9NWH2 141 aa0.16□□□□□ -2.38
CCDC93-205ENST00000466171 USP24Q9UPU5 2620 aa0.16□□□□□ -2.38
CCDC93-205ENST00000466171 LAMC3Q9Y6N6 1575 aa0.15□□□□□ -2.38
CCDC93-205ENST00000466171 ABCA1O95477 2261 aa0.15□□□□□ -2.39
CCDC93-205ENST00000466171 MUC22E2RYF6 1773 aaPredicted RBP0.15□□□□□ -2.39
CCDC93-205ENST00000466171 TRGV1A0A0A0MS02 117 aa0.15□□□□□ -2.39
CCDC93-205ENST00000466171 PITX3O75364 302 aa0.15□□□□□ -2.39
CCDC93-205ENST00000466171 NMBP08949 121 aa0.15□□□□□ -2.39
CCDC93-205ENST00000466171 RRAS2P62070 204 aaPredicted RBP0.15□□□□□ -2.39
CCDC93-205ENST00000466171 RPS25P62851 125 aaKnown RBP0.15□□□□□ -2.39
CCDC93-205ENST00000466171 COX6A2Q02221 97 aa0.15□□□□□ -2.39
CCDC93-205ENST00000466171 C9orf116Q5BN46 136 aaPredicted RBP0.15□□□□□ -2.39
CCDC93-205ENST00000466171 SPTSSAQ969W0 71 aa0.15□□□□□ -2.39
CCDC93-205ENST00000466171 Q96NJ1 140 aa0.15□□□□□ -2.39
CCDC93-205ENST00000466171 SYNE1Q8NF91 8797 aaKnown RBP0.15□□□□□ -2.39
CCDC93-205ENST00000466171 NRXN2Q9P2S2 1712 aa0.15□□□□□ -2.39
CCDC93-205ENST00000466171 UNC13BO14795 1591 aa0.15□□□□□ -2.39
CCDC93-205ENST00000466171 MYH13Q9UKX3 1938 aa0.15□□□□□ -2.39
CCDC93-205ENST00000466171 CACNA1EQ15878 2313 aa0.14□□□□□ -2.39
CCDC93-205ENST00000466171 ANKRD17O75179 2603 aaKnown RBP0.14□□□□□ -2.39
CCDC93-205ENST00000466171 ABCA4P78363 2273 aa0.14□□□□□ -2.39
CCDC93-205ENST00000466171 FAM92AA1XBS5 289 aa0.14□□□□□ -2.39
CCDC93-205ENST00000466171 IFNA17P01571 189 aa0.14□□□□□ -2.39
CCDC93-205ENST00000466171 GCHFRP30047 84 aa0.14□□□□□ -2.39
CCDC93-205ENST00000466171 UBE2D1P51668 147 aa0.14□□□□□ -2.39
CCDC93-205ENST00000466171 EDDM3BP56851 147 aa0.14□□□□□ -2.39
CCDC93-205ENST00000466171 KCNRGQ8N5I3 272 aa0.14□□□□□ -2.39
CCDC93-205ENST00000466171 TCEAL4Q96EI5 215 aa0.14□□□□□ -2.39
CCDC93-205ENST00000466171 PFDN5Q99471 154 aa0.14□□□□□ -2.39
CCDC93-205ENST00000466171 TMEM2Q9UHN6 1383 aa0.14□□□□□ -2.39
CCDC93-205ENST00000466171 SSC5DA1L4H1 1573 aa0.14□□□□□ -2.39
CCDC93-205ENST00000466171 ADGRB1O14514 1584 aa0.14□□□□□ -2.39
CCDC93-205ENST00000466171 PHIPQ8WWQ0 1821 aa0.13□□□□□ -2.39
CCDC93-205ENST00000466171 TMEM14DPA8MWL7 114 aa0.13□□□□□ -2.39
CCDC93-205ENST00000466171 NDUFB6O95139 128 aa0.13□□□□□ -2.39
CCDC93-205ENST00000466171 SPINK1P00995 79 aa0.13□□□□□ -2.39
CCDC93-205ENST00000466171 GUCA1AP43080 201 aaPredicted RBP0.13□□□□□ -2.39
CCDC93-205ENST00000466171 SCIMPQ6UWF3 145 aa0.13□□□□□ -2.39
CCDC93-205ENST00000466171 Q6ZRX8 168 aa0.13□□□□□ -2.39
CCDC93-205ENST00000466171 FAM213BQ8TBF2 198 aa0.13□□□□□ -2.39
CCDC93-205ENST00000466171 IBTKQ9P2D0 1353 aaPredicted RBP0.13□□□□□ -2.39
CCDC93-205ENST00000466171 PLXNA1Q9UIW2 1896 aa0.13□□□□□ -2.39
CCDC93-205ENST00000466171 ANK2Q01484 3957 aa0.13□□□□□ -2.39
CCDC93-205ENST00000466171 DAPK1P53355 1430 aa0.13□□□□□ -2.39
CCDC93-205ENST00000466171 SYNE2Q8WXH0 6885 aaKnown RBP0.12□□□□□ -2.39
CCDC93-205ENST00000466171 F5P12259 2224 aa0.12□□□□□ -2.39
CCDC93-205ENST00000466171 TRAV1-2A0A0B4J238 106 aa0.12□□□□□ -2.39
CCDC93-205ENST00000466171 APOC4-APOC2K7ER74 178 aa0.12□□□□□ -2.39
CCDC93-205ENST00000466171 CBLN1P23435 193 aa0.12□□□□□ -2.39
CCDC93-205ENST00000466171 Q5BKY6 102 aa0.12□□□□□ -2.39
CCDC93-205ENST00000466171 SEC11CQ9BY50 192 aa0.12□□□□□ -2.39
CCDC93-205ENST00000466171 TMEM191AQ9H0A3 160 aa0.12□□□□□ -2.39
CCDC93-205ENST00000466171 SCP2D1Q9UJQ7 156 aa0.12□□□□□ -2.39
CCDC93-205ENST00000466171 NAV2Q8IVL1 2488 aa0.12□□□□□ -2.39
CCDC93-205ENST00000466171 TTC28Q96AY4 2481 aa0.12□□□□□ -2.39
CCDC93-205ENST00000466171 MYOM3Q5VTT5 1437 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms