RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CELSR2Q9HCU4 2923 aa-0.17□□□□□ -2.44
LRCH3-211ENST00000466054 M0R2P5 195 aa-0.18□□□□□ -2.44
LRCH3-211ENST00000466054 U3KQA8 63 aa-0.18□□□□□ -2.44
LRCH3-211ENST00000466054 ANK2Q01484 3957 aa-0.18□□□□□ -2.44
LRCH3-211ENST00000466054 DSTQ03001 7570 aaKnown RBP-0.18□□□□□ -2.44
LRCH3-211ENST00000466054 A0A087WTM6 91 aa-0.19□□□□□ -2.44
LRCH3-211ENST00000466054 APODP05090 189 aa-0.19□□□□□ -2.44
LRCH3-211ENST00000466054 KRTAP6-1Q3LI64 71 aa-0.19□□□□□ -2.44
LRCH3-211ENST00000466054 TMEM242Q9NWH2 141 aa-0.19□□□□□ -2.44
LRCH3-211ENST00000466054 HIVEP3Q5T1R4 2406 aa-0.2□□□□□ -2.44
LRCH3-211ENST00000466054 MORN2Q502X0 79 aa-0.2□□□□□ -2.44
LRCH3-211ENST00000466054 TAC4Q86UU9 113 aa-0.2□□□□□ -2.44
LRCH3-211ENST00000466054 LSM2Q9Y333 95 aaKnown RBP-0.2□□□□□ -2.44
LRCH3-211ENST00000466054 CADP27708 2225 aa-0.2□□□□□ -2.44
LRCH3-211ENST00000466054 F8P00451 2351 aa-0.21□□□□□ -2.44
LRCH3-211ENST00000466054 NMBP08949 121 aa-0.21□□□□□ -2.44
LRCH3-211ENST00000466054 B2MP61769 119 aa-0.21□□□□□ -2.44
LRCH3-211ENST00000466054 FAM74A4Q5TZK3 123 aa-0.21□□□□□ -2.44
LRCH3-211ENST00000466054 SLC48A1Q6P1K1 146 aa-0.21□□□□□ -2.44
LRCH3-211ENST00000466054 C4orf33Q8N1A6 199 aa-0.21□□□□□ -2.44
LRCH3-211ENST00000466054 SSC5DA1L4H1 1573 aa-0.21□□□□□ -2.44
LRCH3-211ENST00000466054 AKAP11Q9UKA4 1901 aa-0.22□□□□□ -2.44
LRCH3-211ENST00000466054 NPC2P61916 151 aa-0.22□□□□□ -2.44
LRCH3-211ENST00000466054 COX7B2Q8TF08 81 aa-0.22□□□□□ -2.44
LRCH3-211ENST00000466054 ANKRD17O75179 2603 aaKnown RBP-0.22□□□□□ -2.45
LRCH3-211ENST00000466054 UNC79Q9P2D8 2635 aa-0.23□□□□□ -2.45
LRCH3-211ENST00000466054 TRBV7-1A0A0A6YYK4 115 aa-0.23□□□□□ -2.45
LRCH3-211ENST00000466054 SPCS2Q15005 226 aa-0.23□□□□□ -2.45
LRCH3-211ENST00000466054 Q96NJ1 140 aa-0.23□□□□□ -2.45
LRCH3-211ENST00000466054 V9GYV3 84 aa-0.23□□□□□ -2.45
LRCH3-211ENST00000466054 PHIPQ8WWQ0 1821 aa-0.23□□□□□ -2.45
LRCH3-211ENST00000466054 TRBV20-1A0A075B6N2 111 aa-0.24□□□□□ -2.45
LRCH3-211ENST00000466054 NCS1P62166 190 aa-0.24□□□□□ -2.45
LRCH3-211ENST00000466054 C20orf197Q8N268 126 aa-0.24□□□□□ -2.45
LRCH3-211ENST00000466054 MMGT1Q8N4V1 131 aa-0.24□□□□□ -2.45
LRCH3-211ENST00000466054 AIF1LQ9BQI0 150 aa-0.24□□□□□ -2.45
LRCH3-211ENST00000466054 MRPL40Q9NQ50 206 aaKnown RBP-0.24□□□□□ -2.45
LRCH3-211ENST00000466054 MUC2Q02817 5179 aa-0.24□□□□□ -2.45
LRCH3-211ENST00000466054 NRXN2Q9P2S2 1712 aa-0.24□□□□□ -2.45
LRCH3-211ENST00000466054 TRAV12-3A0A0B4J271 114 aa-0.25□□□□□ -2.45
LRCH3-211ENST00000466054 SCGB1A1P11684 91 aa-0.25□□□□□ -2.45
LRCH3-211ENST00000466054 SAR1AQ9NR31 198 aa-0.25□□□□□ -2.45
LRCH3-211ENST00000466054 ERCC6Q03468 1493 aa-0.25□□□□□ -2.45
LRCH3-211ENST00000466054 MYH13Q9UKX3 1938 aa-0.25□□□□□ -2.45
LRCH3-211ENST00000466054 KIAA0100Q14667 2235 aaKnown RBP-0.26□□□□□ -2.45
LRCH3-211ENST00000466054 SCP2D1Q9UJQ7 156 aa-0.26□□□□□ -2.45
LRCH3-211ENST00000466054 CELSR1Q9NYQ6 3014 aa-0.26□□□□□ -2.45
LRCH3-211ENST00000466054 NSD1Q96L73 2696 aaPredicted RBP-0.26□□□□□ -2.45
LRCH3-211ENST00000466054 PARP14Q460N5 1801 aa-0.27□□□□□ -2.45
LRCH3-211ENST00000466054 AHCTF1Q8WYP5 2266 aa-0.27□□□□□ -2.45
LRCH3-211ENST00000466054 ACYP2P14621 99 aa-0.27□□□□□ -2.45
LRCH3-211ENST00000466054 LINC01545Q5VT33 79 aa-0.27□□□□□ -2.45
LRCH3-211ENST00000466054 VSTM2AQ8TAG5 236 aa-0.27□□□□□ -2.45
LRCH3-211ENST00000466054 NDUFA12Q9UI09 145 aa-0.27□□□□□ -2.45
LRCH3-211ENST00000466054 DOCK11Q5JSL3 2073 aa-0.27□□□□□ -2.45
LRCH3-211ENST00000466054 FLNCQ14315 2725 aa-0.27□□□□□ -2.45
LRCH3-211ENST00000466054 PCLOQ9Y6V0 5065 aa-0.27□□□□□ -2.45
LRCH3-211ENST00000466054 SYNJ1O43426 1573 aa-0.28□□□□□ -2.45
LRCH3-211ENST00000466054 OVOS2A0A0J9YW53 1432 aa-0.28□□□□□ -2.45
LRCH3-211ENST00000466054 OVOS2Q6IE36 1432 aa-0.28□□□□□ -2.45
LRCH3-211ENST00000466054 CDK5RAP2Q96SN8 1893 aa-0.28□□□□□ -2.45
LRCH3-211ENST00000466054 TMEM14DPA8MWL7 114 aa-0.28□□□□□ -2.45
LRCH3-211ENST00000466054 Q6ZRX8 168 aa-0.28□□□□□ -2.45
LRCH3-211ENST00000466054 LAMB1P07942 1786 aa-0.28□□□□□ -2.45
LRCH3-211ENST00000466054 UBR5O95071 2799 aaPredicted RBP-0.29□□□□□ -2.46
LRCH3-211ENST00000466054 INSL4Q14641 139 aa-0.29□□□□□ -2.46
LRCH3-211ENST00000466054 SPANXN1Q5VSR9 72 aa-0.29□□□□□ -2.46
LRCH3-211ENST00000466054 PYDC1Q8WXC3 89 aa-0.29□□□□□ -2.46
LRCH3-211ENST00000466054 TENM4Q6N022 2769 aa-0.29□□□□□ -2.46
LRCH3-211ENST00000466054 LRP2P98164 4655 aa-0.29□□□□□ -2.46
LRCH3-211ENST00000466054 KMT2CQ8NEZ4 4911 aaKnown RBP-0.3□□□□□ -2.46
LRCH3-211ENST00000466054 HMCN2Q8NDA2 5059 aa-0.3□□□□□ -2.46
LRCH3-211ENST00000466054 MUC22E2RYF6 1773 aaPredicted RBP-0.31□□□□□ -2.46
LRCH3-211ENST00000466054 GCHFRP30047 84 aa-0.31□□□□□ -2.46
LRCH3-211ENST00000466054 BATF3Q9NR55 127 aa-0.31□□□□□ -2.46
LRCH3-211ENST00000466054 STAB1Q9NY15 2570 aa-0.31□□□□□ -2.46
LRCH3-211ENST00000466054 DISP2A7MBM2 1401 aa-0.31□□□□□ -2.46
LRCH3-211ENST00000466054 WNK2Q9Y3S1 2297 aa-0.32□□□□□ -2.46
LRCH3-211ENST00000466054 TNXBP22105 4242 aa-0.32□□□□□ -2.46
LRCH3-211ENST00000466054 TRGV1A0A0A0MS02 117 aa-0.32□□□□□ -2.46
LRCH3-211ENST00000466054 IGLC6P0CF74 106 aa-0.32□□□□□ -2.46
LRCH3-211ENST00000466054 DR1Q01658 176 aa-0.32□□□□□ -2.46
LRCH3-211ENST00000466054 HERC1Q15751 4861 aa-0.32□□□□□ -2.46
LRCH3-211ENST00000466054 ANKRD30AQ9BXX3 1397 aa-0.32□□□□□ -2.46
LRCH3-211ENST00000466054 C10orf142B7Z368 130 aa-0.33□□□□□ -2.46
LRCH3-211ENST00000466054 IFITM1P13164 125 aa-0.33□□□□□ -2.46
LRCH3-211ENST00000466054 C9orf116Q5BN46 136 aaPredicted RBP-0.33□□□□□ -2.46
LRCH3-211ENST00000466054 MIC13Q5XKP0 118 aa-0.33□□□□□ -2.46
LRCH3-211ENST00000466054 HERC2O95714 4834 aa-0.33□□□□□ -2.46
LRCH3-211ENST00000466054 SIPA1L3O60292 1781 aaPredicted RBP-0.33□□□□□ -2.46
LRCH3-211ENST00000466054 ARFGEF1Q9Y6D6 1849 aa-0.34□□□□□ -2.46
LRCH3-211ENST00000466054 FAM236AA0A1B0GUQ0 79 aa-0.34□□□□□ -2.46
LRCH3-211ENST00000466054 FAM236BA0A1B0GV22 79 aa-0.34□□□□□ -2.46
LRCH3-211ENST00000466054 ADGRB1O14514 1584 aa-0.34□□□□□ -2.46
LRCH3-211ENST00000466054 NCR2O95944 276 aa-0.34□□□□□ -2.46
LRCH3-211ENST00000466054 TSPAN19P0C672 248 aa-0.34□□□□□ -2.46
LRCH3-211ENST00000466054 PIRTP0C851 137 aa-0.34□□□□□ -2.46
LRCH3-211ENST00000466054 EDDM3BP56851 147 aa-0.34□□□□□ -2.46
LRCH3-211ENST00000466054 HIST1H1AQ02539 215 aaPredicted RBP-0.34□□□□□ -2.46
LRCH3-211ENST00000466054 UBE2DNLQ8IWF7 75 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms