RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 TRBV27A0A0K0K1C4 114 aa14.83□□□□□ -0.03
SDF4-205ENST00000465727 RHODO00212 210 aa14.83□□□□□ -0.03
SDF4-205ENST00000465727 AJUBAQ96IF1 538 aa14.83□□□□□ -0.03
SDF4-205ENST00000465727 IGF2RP11717 2491 aa14.83□□□□□ -0.04
SDF4-205ENST00000465727 ANKHD1Q8IWZ3 2542 aaKnown RBP14.83□□□□□ -0.04
SDF4-205ENST00000465727 A4D1N5 150 aa14.83□□□□□ -0.04
SDF4-205ENST00000465727 LEPROTO15243 131 aa14.83□□□□□ -0.04
SDF4-205ENST00000465727 ZFP36P26651 326 aaKnown RBP14.83□□□□□ -0.04
SDF4-205ENST00000465727 C11orf71Q6IPW1 123 aa14.83□□□□□ -0.04
SDF4-205ENST00000465727 TMEM263Q8WUH6 116 aaKnown RBP14.83□□□□□ -0.04
SDF4-205ENST00000465727 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.82□□□□□ -0.04
SDF4-205ENST00000465727 TRBV6-5A0A0K0K1A5 114 aa14.82□□□□□ -0.04
SDF4-205ENST00000465727 NDUFA4O00483 81 aa14.82□□□□□ -0.04
SDF4-205ENST00000465727 IGHV1-69P01742 117 aa14.82□□□□□ -0.04
SDF4-205ENST00000465727 ARL3P36405 182 aa14.82□□□□□ -0.04
SDF4-205ENST00000465727 RPL39P62891 51 aaKnown RBP14.82□□□□□ -0.04
SDF4-205ENST00000465727 SUMO4Q6EEV6 95 aa14.82□□□□□ -0.04
SDF4-205ENST00000465727 ABCA4P78363 2273 aa14.81□□□□□ -0.04
SDF4-205ENST00000465727 SNCGO76070 127 aa14.81□□□□□ -0.04
SDF4-205ENST00000465727 TGFAP01135 160 aa14.81□□□□□ -0.04
SDF4-205ENST00000465727 PRR30Q53SZ7 412 aaPredicted RBP14.81□□□□□ -0.04
SDF4-205ENST00000465727 EPG5Q9HCE0 2579 aa14.81□□□□□ -0.04
SDF4-205ENST00000465727 ANKRD11Q6UB99 2663 aaPredicted RBP14.81□□□□□ -0.04
SDF4-205ENST00000465727 ATXN8Q156A1 80 aa14.81□□□□□ -0.04
SDF4-205ENST00000465727 C5orf56Q8N8D9 126 aa14.81□□□□□ -0.04
SDF4-205ENST00000465727 BSNQ9UPA5 3926 aa14.81□□□□□ -0.04
SDF4-205ENST00000465727 USP24Q9UPU5 2620 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 ACACAQ13085 2346 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 SDHAF1A6NFY7 115 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 FAM90A27PA6NNH2 459 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 GAGE2BQ13066 116 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 GAGE2EQ4V326 116 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 Q6Q795 121 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 RAX2Q96IS3 184 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 GAGE2DQ9UEU5 116 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 MUC4Q99102 2169 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 A0A0J9YX75 114 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 TMEM223A0PJW6 202 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 GATA3P23771 443 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 SAA4P35542 130 aa14.8□□□□□ -0.04
SDF4-205ENST00000465727 CRIP2P52943 208 aaPredicted RBP14.8□□□□□ -0.04
SDF4-205ENST00000465727 TRAV41A0A0B4J266 112 aa14.79□□□□□ -0.04
SDF4-205ENST00000465727 LGALS9O00182 355 aa14.79□□□□□ -0.04
SDF4-205ENST00000465727 RPL13AP40429 203 aaKnown RBP14.79□□□□□ -0.04
SDF4-205ENST00000465727 C19orf54Q5BKX5 351 aa14.79□□□□□ -0.04
SDF4-205ENST00000465727 LAMA5O15230 3695 aa14.79□□□□□ -0.04
SDF4-205ENST00000465727 GRNP28799 593 aaKnown RBP14.78□□□□□ -0.04
SDF4-205ENST00000465727 RHOHQ15669 191 aa14.78□□□□□ -0.04
SDF4-205ENST00000465727 NSUN5P1Q3KNT7 163 aa14.78□□□□□ -0.04
SDF4-205ENST00000465727 CSMD1Q96PZ7 3565 aa14.78□□□□□ -0.04
SDF4-205ENST00000465727 FAM159AQ6UWV7 190 aa14.78□□□□□ -0.04
SDF4-205ENST00000465727 DCHS2Q6V1P9 2916 aa14.78□□□□□ -0.04
SDF4-205ENST00000465727 KLLNB2CW77 178 aa14.77□□□□□ -0.04
SDF4-205ENST00000465727 TRPT1Q86TN4 253 aaKnown RBP14.77□□□□□ -0.04
SDF4-205ENST00000465727 NHLRC4P0CG21 123 aaPredicted RBP14.77□□□□□ -0.05
SDF4-205ENST00000465727 LINC01620Q4KN68 170 aa14.77□□□□□ -0.05
SDF4-205ENST00000465727 UNQ9165/PRO28630Q6UXU0 137 aa14.77□□□□□ -0.05
SDF4-205ENST00000465727 Q8N1Y9 231 aa14.77□□□□□ -0.05
SDF4-205ENST00000465727 F5H697 171 aa14.76□□□□□ -0.05
SDF4-205ENST00000465727 EIF4EBP3O60516 100 aaPredicted RBP14.76□□□□□ -0.05
SDF4-205ENST00000465727 NDUFV3P56181 108 aaKnown RBP14.76□□□□□ -0.05
SDF4-205ENST00000465727 KMT2BQ9UMN6 2715 aaPredicted RBP14.75□□□□□ -0.05
SDF4-205ENST00000465727 TRAV2A0A0B4J234 112 aa14.75□□□□□ -0.05
SDF4-205ENST00000465727 TRBV30A0A0K0K1B3 111 aa14.75□□□□□ -0.05
SDF4-205ENST00000465727 NTN5Q8WTR8 489 aaPredicted RBP14.75□□□□□ -0.05
SDF4-205ENST00000465727 SPANXA1Q9NS26 97 aa14.75□□□□□ -0.05
SDF4-205ENST00000465727 MDFICQ9P1T7 246 aa14.75□□□□□ -0.05
SDF4-205ENST00000465727 LRBAP50851 2863 aa14.75□□□□□ -0.05
SDF4-205ENST00000465727 MUSTN1Q8IVN3 82 aa14.75□□□□□ -0.05
SDF4-205ENST00000465727 SS18L2Q9UHA2 77 aa14.75□□□□□ -0.05
SDF4-205ENST00000465727 ATMQ13315 3056 aa14.75□□□□□ -0.05
SDF4-205ENST00000465727 TRBV10-2A0A0K0K1G8 114 aa14.74□□□□□ -0.05
SDF4-205ENST00000465727 F6UB75 175 aa14.74□□□□□ -0.05
SDF4-205ENST00000465727 DEFB1P60022 68 aa14.74□□□□□ -0.05
SDF4-205ENST00000465727 MOB4Q9Y3A3 225 aa14.74□□□□□ -0.05
SDF4-205ENST00000465727 M0R2P5 195 aa14.73□□□□□ -0.05
SDF4-205ENST00000465727 Q1RN00 199 aa14.73□□□□□ -0.05
SDF4-205ENST00000465727 A0A087WWL8 130 aa14.73□□□□□ -0.05
SDF4-205ENST00000465727 IFITM1P13164 125 aa14.73□□□□□ -0.05
SDF4-205ENST00000465727 ZNF22P17026 224 aaPredicted RBP14.73□□□□□ -0.05
SDF4-205ENST00000465727 RPL11P62913 178 aaKnown RBP14.73□□□□□ -0.05
SDF4-205ENST00000465727 TTC32Q5I0X7 151 aa14.73□□□□□ -0.05
SDF4-205ENST00000465727 JPT2Q9H910 190 aa14.73□□□□□ -0.05
SDF4-205ENST00000465727 TRAV4A0A0B4J268 109 aa14.72□□□□□ -0.05
SDF4-205ENST00000465727 NPFFO15130 113 aa14.72□□□□□ -0.05
SDF4-205ENST00000465727 BRI3O95415 125 aa14.72□□□□□ -0.05
SDF4-205ENST00000465727 TRAV8-4A0A0B4J246 113 aa14.72□□□□□ -0.05
SDF4-205ENST00000465727 GAGE12JA6NER3 117 aa14.72□□□□□ -0.05
SDF4-205ENST00000465727 B5MCH6 92 aa14.72□□□□□ -0.05
SDF4-205ENST00000465727 GAGE7O76087 117 aa14.72□□□□□ -0.05
SDF4-205ENST00000465727 GAGE12FP0CL80 117 aa14.72□□□□□ -0.05
SDF4-205ENST00000465727 GAGE12GP0CL81 117 aa14.72□□□□□ -0.05
SDF4-205ENST00000465727 GAGE12IP0CL82 117 aa14.72□□□□□ -0.05
SDF4-205ENST00000465727 GAGE4Q13068 117 aa14.72□□□□□ -0.05
SDF4-205ENST00000465727 USMG5Q96IX5 58 aa14.71□□□□□ -0.05
SDF4-205ENST00000465727 CACNA1BQ00975 2339 aa14.71□□□□□ -0.06
SDF4-205ENST00000465727 H3BUA1 57 aa14.7□□□□□ -0.06
SDF4-205ENST00000465727 H7C2G1 150 aa14.7□□□□□ -0.06
SDF4-205ENST00000465727 MRPL23Q16540 153 aaKnown RBP14.7□□□□□ -0.06
SDF4-205ENST00000465727 ZNF256Q9Y2P7 627 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms