RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 IGLC2P0DOY2 106 aa3.56□□□□□ -1.84
SGCE-209ENST00000462731 IGLC3P0DOY3 106 aa3.56□□□□□ -1.84
SGCE-209ENST00000462731 PRB4P10163 310 aaPredicted RBP3.56□□□□□ -1.84
SGCE-209ENST00000462731 PYDC2Q56P42 97 aa3.56□□□□□ -1.84
SGCE-209ENST00000462731 LYPD5Q6UWN5 251 aa3.56□□□□□ -1.84
SGCE-209ENST00000462731 CMTM2Q8TAZ6 248 aa3.56□□□□□ -1.84
SGCE-209ENST00000462731 AMELYQ99218 206 aa3.56□□□□□ -1.84
SGCE-209ENST00000462731 KIF20BQ96Q89 1820 aa3.56□□□□□ -1.84
SGCE-209ENST00000462731 CUL9Q8IWT3 2517 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 SLIT2O94813 1529 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 EPRSP07814 1512 aaKnown RBP3.55□□□□□ -1.84
SGCE-209ENST00000462731 SDK2Q58EX2 2172 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 ARHGAP32A7KAX9 2087 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 HEATR5BQ9P2D3 2071 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 COL1A2P08123 1366 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 MT3P25713 68 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 ETDBQ3ZM63 59 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 DEFB134Q4QY38 66 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 S100ZQ8WXG8 99 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 LINC00167Q96N53 147 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 KRTAP1-5Q9BYS1 174 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 KIAA1549LQ6ZVL6 1849 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 LAMB1P07942 1786 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 MON2Q7Z3U7 1717 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 KDM6BO15054 1643 aa3.55□□□□□ -1.84
SGCE-209ENST00000462731 NCOA2Q15596 1464 aa3.54□□□□□ -1.84
SGCE-209ENST00000462731 PTPRFP10586 1907 aa3.54□□□□□ -1.84
SGCE-209ENST00000462731 SRCAPQ6ZRS2 3230 aa3.54□□□□□ -1.84
SGCE-209ENST00000462731 TNS1Q9HBL0 1735 aaKnown RBP3.54□□□□□ -1.84
SGCE-209ENST00000462731 CTSGP08311 255 aa3.54□□□□□ -1.84
SGCE-209ENST00000462731 ELOBQ15370 118 aa3.54□□□□□ -1.84
SGCE-209ENST00000462731 BVES-AS1Q5T3Y7 98 aa3.54□□□□□ -1.84
SGCE-209ENST00000462731 SPINK14Q6IE38 97 aa3.54□□□□□ -1.84
SGCE-209ENST00000462731 ZNF818PQ6ZRF7 136 aa3.54□□□□□ -1.84
SGCE-209ENST00000462731 NXT2Q9NPJ8 142 aaKnown RBP3.54□□□□□ -1.84
SGCE-209ENST00000462731 MYH8P13535 1937 aa3.54□□□□□ -1.84
SGCE-209ENST00000462731 ANKARQ7Z5J8 1434 aa3.53□□□□□ -1.84
SGCE-209ENST00000462731 LRRIQ1Q96JM4 1722 aa3.53□□□□□ -1.84
SGCE-209ENST00000462731 TRBV10-1A0A0K0K1A3 114 aa3.53□□□□□ -1.84
SGCE-209ENST00000462731 CFDP00746 253 aaPredicted RBP3.53□□□□□ -1.84
SGCE-209ENST00000462731 NMSQ5H8A3 153 aa3.53□□□□□ -1.84
SGCE-209ENST00000462731 IFI27L1Q96BM0 104 aa3.53□□□□□ -1.84
SGCE-209ENST00000462731 FAM167A-AS1Q96KT0 104 aa3.53□□□□□ -1.84
SGCE-209ENST00000462731 TRPM7Q96QT4 1865 aa3.53□□□□□ -1.84
SGCE-209ENST00000462731 MYO16Q9Y6X6 1858 aa3.53□□□□□ -1.84
SGCE-209ENST00000462731 NLRP1Q9C000 1473 aa3.53□□□□□ -1.84
SGCE-209ENST00000462731 SHROOM2Q13796 1616 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 PLXNA4Q9HCM2 1894 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 DIP2BQ9P265 1576 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 IGKV2D-24A0A075B6R9 120 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 TRAV12-3A0A0B4J271 114 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 BCE1O60756 84 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 MOBPQ13875 183 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 WFDC2Q14508 124 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 CYP2G1PQ6ZSU1 146 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 KRTAP11-1Q8IUC1 163 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 LINC01600Q96MT4 127 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 TIMM21Q9BVV7 248 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 CYSTM1Q9H1C7 97 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 ANAPC11Q9NYG5 84 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 ORMDL1Q9P0S3 153 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 TP53TG3Q9ULZ0 132 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 LAMB2P55268 1798 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 ATP10BO94823 1461 aa3.52□□□□□ -1.85
SGCE-209ENST00000462731 TRAV23DV6A0A075B6W5 121 aa3.51□□□□□ -1.85
SGCE-209ENST00000462731 A0A0J9YY99 117 aa3.51□□□□□ -1.85
SGCE-209ENST00000462731 KANTRA0A1W2PQU2 76 aa3.51□□□□□ -1.85
SGCE-209ENST00000462731 H7BZZ5 65 aa3.51□□□□□ -1.85
SGCE-209ENST00000462731 CSAG1Q6PB30 78 aa3.51□□□□□ -1.85
SGCE-209ENST00000462731 DMAC1Q96GE9 116 aa3.51□□□□□ -1.85
SGCE-209ENST00000462731 PRR34Q9NV39 138 aa3.51□□□□□ -1.85
SGCE-209ENST00000462731 RGPD4Q7Z3J3 1758 aa3.51□□□□□ -1.85
SGCE-209ENST00000462731 NINQ8N4C6 2090 aa3.5□□□□□ -1.85
SGCE-209ENST00000462731 KIF21AQ7Z4S6 1674 aa3.5□□□□□ -1.85
SGCE-209ENST00000462731 MLH3Q9UHC1 1453 aa3.5□□□□□ -1.85
SGCE-209ENST00000462731 EDC4Q6P2E9 1401 aaKnown RBP3.5□□□□□ -1.85
SGCE-209ENST00000462731 COL11A1P12107 1806 aaPredicted RBP3.49□□□□□ -1.85
SGCE-209ENST00000462731 SHANK2Q9UPX8 1470 aa3.49□□□□□ -1.85
SGCE-209ENST00000462731 MUC22E2RYF6 1773 aaPredicted RBP3.49□□□□□ -1.85
SGCE-209ENST00000462731 TRBV7-3A0A075B6L6 115 aa3.49□□□□□ -1.85
SGCE-209ENST00000462731 RTL8CO15255 209 aa3.49□□□□□ -1.85
SGCE-209ENST00000462731 TFF1P04155 84 aa3.49□□□□□ -1.85
SGCE-209ENST00000462731 UBE2D3P61077 147 aa3.49□□□□□ -1.85
SGCE-209ENST00000462731 UBE2D2P62837 147 aa3.49□□□□□ -1.85
SGCE-209ENST00000462731 HMGN3Q15651 99 aa3.49□□□□□ -1.85
SGCE-209ENST00000462731 SH2D6Q7Z4S9 175 aa3.49□□□□□ -1.85
SGCE-209ENST00000462731 PATE1Q8WXA2 126 aa3.49□□□□□ -1.85
SGCE-209ENST00000462731 MANBALQ9NQG1 85 aa3.49□□□□□ -1.85
SGCE-209ENST00000462731 PRO1854Q9UHT4 67 aa3.49□□□□□ -1.85
SGCE-209ENST00000462731 PRO0461Q9UI25 63 aa3.49□□□□□ -1.85
SGCE-209ENST00000462731 CACNA1DQ01668 2161 aa3.49□□□□□ -1.85
SGCE-209ENST00000462731 LAMB4A4D0S4 1761 aa3.48□□□□□ -1.85
SGCE-209ENST00000462731 KIF14Q15058 1648 aa3.48□□□□□ -1.85
SGCE-209ENST00000462731 NUPR2A6NF83 97 aa3.48□□□□□ -1.85
SGCE-209ENST00000462731 UBE2D1P51668 147 aa3.48□□□□□ -1.85
SGCE-209ENST00000462731 SNRPFP62306 86 aaKnown RBP3.48□□□□□ -1.85
SGCE-209ENST00000462731 ODF3Q96PU9 254 aa3.48□□□□□ -1.85
SGCE-209ENST00000462731 MRPL36Q9P0J6 103 aaKnown RBP3.48□□□□□ -1.85
SGCE-209ENST00000462731 HIGD1BQ9P298 99 aa3.48□□□□□ -1.85
SGCE-209ENST00000462731 ZC3H13Q5T200 1668 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms